RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 PHKG2P15735 406 aa24.97■■□□□ 1.59
PDE6B-206ENST00000467152 AMOTQ4VCS5 1084 aa24.97■■□□□ 1.59
PDE6B-206ENST00000467152 PELP1Q8IZL8 1130 aaKnown RBP24.97■■□□□ 1.59
PDE6B-206ENST00000467152 RALBP1Q15311 655 aa24.96■■□□□ 1.59
PDE6B-206ENST00000467152 MPRIPQ6WCQ1 1025 aa24.96■■□□□ 1.59
PDE6B-206ENST00000467152 U2SURPO15042 1029 aaKnown RBP24.95■■□□□ 1.58
PDE6B-206ENST00000467152 GRIN3BO60391 1043 aa24.95■■□□□ 1.58
PDE6B-206ENST00000467152 C1QTNF8P60827 252 aa24.94■■□□□ 1.58
PDE6B-206ENST00000467152 ZNF530Q6P9A1 599 aaPredicted RBP24.93■■□□□ 1.58
PDE6B-206ENST00000467152 MSL1Q68DK7 614 aa24.92■■□□□ 1.58
PDE6B-206ENST00000467152 ZNF831Q5JPB2 1677 aa24.91■■□□□ 1.58
PDE6B-206ENST00000467152 AK7Q96M32 723 aa24.91■■□□□ 1.58
PDE6B-206ENST00000467152 NUDCQ9Y266 331 aa24.91■■□□□ 1.58
PDE6B-206ENST00000467152 CD2APQ9Y5K6 639 aa24.91■■□□□ 1.58
PDE6B-206ENST00000467152 GIGYF1O75420 1035 aaPredicted RBP24.89■■□□□ 1.58
PDE6B-206ENST00000467152 YBX3P16989 372 aaKnown RBP eCLIP24.89■■□□□ 1.58
PDE6B-206ENST00000467152 SENP3-EIF4A1A0A087X0R7 540 aa24.88■■□□□ 1.57
PDE6B-206ENST00000467152 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
PDE6B-206ENST00000467152 PIGBQ92521 554 aa24.88■■□□□ 1.57
PDE6B-206ENST00000467152 DCAF5Q96JK2 942 aa24.87■■□□□ 1.57
PDE6B-206ENST00000467152 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
PDE6B-206ENST00000467152 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.57
PDE6B-206ENST00000467152 MTHFSDQ2M296 383 aaKnown RBP24.86■■□□□ 1.57
PDE6B-206ENST00000467152 C1orf141Q5JVX7 400 aa24.86■■□□□ 1.57
PDE6B-206ENST00000467152 KIF13BQ9NQT8 1826 aa24.85■■□□□ 1.57
PDE6B-206ENST00000467152 ERVV-2B6SEH9 535 aa24.85■■□□□ 1.57
PDE6B-206ENST00000467152 SSFA2P28290 1259 aa24.85■■□□□ 1.57
PDE6B-206ENST00000467152 RSPH6AQ9H0K4 717 aa24.85■■□□□ 1.57
PDE6B-206ENST00000467152 TMOD3Q9NYL9 352 aa24.85■■□□□ 1.57
PDE6B-206ENST00000467152 COL5A3P25940 1745 aaPredicted RBP24.84■■□□□ 1.57
PDE6B-206ENST00000467152 LOC102724428A0A0B4J2F2 783 aa24.84■■□□□ 1.57
PDE6B-206ENST00000467152 SIK1P57059 783 aa24.84■■□□□ 1.57
PDE6B-206ENST00000467152 AKAP4Q5JQC9 854 aa24.84■■□□□ 1.57
PDE6B-206ENST00000467152 PRKRIP1Q9H875 184 aaPredicted RBP24.84■■□□□ 1.57
PDE6B-206ENST00000467152 MYBBP1AQ9BQG0 1328 aaKnown RBP24.83■■□□□ 1.56
PDE6B-206ENST00000467152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.82■■□□□ 1.56
PDE6B-206ENST00000467152 FCHSD2O94868 740 aa24.82■■□□□ 1.56
PDE6B-206ENST00000467152 PRKAR2BP31323 418 aa24.82■■□□□ 1.56
PDE6B-206ENST00000467152 PHACTR3Q96KR7 559 aa24.82■■□□□ 1.56
PDE6B-206ENST00000467152 KDM6AO15550 1401 aaPredicted RBP24.81■■□□□ 1.56
PDE6B-206ENST00000467152 PHF14O94880 888 aa24.8■■□□□ 1.56
PDE6B-206ENST00000467152 ATP10DQ9P241 1426 aa24.79■■□□□ 1.56
PDE6B-206ENST00000467152 AMIGO3Q86WK7 504 aa24.79■■□□□ 1.56
PDE6B-206ENST00000467152 LINC00116Q8NCU8 138 aa24.79■■□□□ 1.56
PDE6B-206ENST00000467152 LGR6Q9HBX8 967 aa24.79■■□□□ 1.56
PDE6B-206ENST00000467152 ASAP1Q9ULH1 1129 aa24.79■■□□□ 1.56
PDE6B-206ENST00000467152 CICQ96RK0 1608 aaPredicted RBP24.79■■□□□ 1.56
PDE6B-206ENST00000467152 CABP4P57796 275 aa24.78■■□□□ 1.56
PDE6B-206ENST00000467152 ADCY9O60503 1353 aa24.78■■□□□ 1.56
PDE6B-206ENST00000467152 RNMTO43148 476 aaKnown RBP24.77■■□□□ 1.56
PDE6B-206ENST00000467152 GAS2L2Q8NHY3 880 aa24.77■■□□□ 1.56
PDE6B-206ENST00000467152 ATG3Q9NT62 314 aa24.77■■□□□ 1.56
PDE6B-206ENST00000467152 KIAA1551Q9HCM1 1747 aa24.77■■□□□ 1.56
PDE6B-206ENST00000467152 NFATC2IPQ8NCF5 419 aa24.76■■□□□ 1.55
PDE6B-206ENST00000467152 C4AP0C0L4 1744 aa24.75■■□□□ 1.55
PDE6B-206ENST00000467152 GNPATO15228 680 aa24.75■■□□□ 1.55
PDE6B-206ENST00000467152 ATP6V1AP38606 617 aa24.75■■□□□ 1.55
PDE6B-206ENST00000467152 ITPK1Q13572 414 aa24.75■■□□□ 1.55
PDE6B-206ENST00000467152 CEP350Q5VT06 3117 aa24.73■■□□□ 1.55
PDE6B-206ENST00000467152 GNAT3A8MTJ3 354 aa24.72■■□□□ 1.55
PDE6B-206ENST00000467152 IL17REQ8NFR9 667 aa24.72■■□□□ 1.55
PDE6B-206ENST00000467152 BRCA1P38398 1863 aaKnown RBP24.72■■□□□ 1.55
PDE6B-206ENST00000467152 N4BP2Q86UW6 1770 aaPredicted RBP24.72■■□□□ 1.55
PDE6B-206ENST00000467152 PLEKHF1Q96S99 279 aa24.71■■□□□ 1.55
PDE6B-206ENST00000467152 SLC52A2Q9HAB3 445 aa24.71■■□□□ 1.55
PDE6B-206ENST00000467152 SCN11AQ9UI33 1791 aa24.71■■□□□ 1.55
PDE6B-206ENST00000467152 MYH14Q7Z406 1995 aaKnown RBP24.71■■□□□ 1.55
PDE6B-206ENST00000467152 VIRMAQ69YN4 1812 aaKnown RBP24.7■■□□□ 1.54
PDE6B-206ENST00000467152 SMIM5Q71RC9 77 aa24.69■■□□□ 1.54
PDE6B-206ENST00000467152 GPBP1L1Q9HC44 474 aaPredicted RBP24.69■■□□□ 1.54
PDE6B-206ENST00000467152 ADRA2BP18089 450 aa24.68■■□□□ 1.54
PDE6B-206ENST00000467152 RTCBQ9Y3I0 505 aaKnown RBP24.68■■□□□ 1.54
PDE6B-206ENST00000467152 CNTNAP4Q9C0A0 1308 aa24.67■■□□□ 1.54
PDE6B-206ENST00000467152 PXDNLA1KZ92 1463 aa24.67■■□□□ 1.54
PDE6B-206ENST00000467152 SLC4A9Q96Q91 983 aa24.67■■□□□ 1.54
PDE6B-206ENST00000467152 TJP1Q07157 1748 aa24.66■■□□□ 1.54
PDE6B-206ENST00000467152 ARFGEF1Q9Y6D6 1849 aa24.66■■□□□ 1.54
PDE6B-206ENST00000467152 MMP10P09238 476 aa24.66■■□□□ 1.54
PDE6B-206ENST00000467152 RC3H1Q5TC82 1133 aaKnown RBP24.66■■□□□ 1.54
PDE6B-206ENST00000467152 PNNQ9H307 717 aaKnown RBP24.66■■□□□ 1.54
PDE6B-206ENST00000467152 C10orf71Q711Q0 1435 aa24.66■■□□□ 1.54
PDE6B-206ENST00000467152 ADAMTS7Q9UKP4 1686 aa24.66■■□□□ 1.54
PDE6B-206ENST00000467152 TRAPPC3LQ5T215 181 aa24.65■■□□□ 1.54
PDE6B-206ENST00000467152 NLGN1Q8N2Q7 840 aa24.65■■□□□ 1.54
PDE6B-206ENST00000467152 RBM42Q9BTD8 480 aaKnown RBP24.65■■□□□ 1.54
PDE6B-206ENST00000467152 NEFMP07197 916 aa24.63■■□□□ 1.53
PDE6B-206ENST00000467152 MRC1P22897 1456 aa24.63■■□□□ 1.53
PDE6B-206ENST00000467152 HTATSF1O43719 755 aaKnown RBP24.62■■□□□ 1.53
PDE6B-206ENST00000467152 PTCD1O75127 700 aaKnown RBP24.62■■□□□ 1.53
PDE6B-206ENST00000467152 SLC39A6Q13433 755 aa24.62■■□□□ 1.53
PDE6B-206ENST00000467152 ADAMTS8Q9UP79 889 aa24.62■■□□□ 1.53
PDE6B-206ENST00000467152 CEMIPQ8WUJ3 1361 aa24.62■■□□□ 1.53
PDE6B-206ENST00000467152 ANP32CO43423 234 aa24.61■■□□□ 1.53
PDE6B-206ENST00000467152 TGFB2P61812 414 aa24.61■■□□□ 1.53
PDE6B-206ENST00000467152 TEFQ10587 303 aa24.61■■□□□ 1.53
PDE6B-206ENST00000467152 NFE2L2Q16236 605 aa24.61■■□□□ 1.53
PDE6B-206ENST00000467152 WDR43Q15061 677 aaKnown RBP eCLIP24.6■■□□□ 1.53
PDE6B-206ENST00000467152 CCDC184Q52MB2 194 aa24.6■■□□□ 1.53
PDE6B-206ENST00000467152 MCM10Q7L590 875 aa24.6■■□□□ 1.53
PDE6B-206ENST00000467152 RTF1Q92541 710 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms