RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 RNF217Q8TC41 542 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 SERTAD1Q9UHV2 236 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 KIAA1024Q9UPX6 916 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.77□□□□□ -1.17
CALD1-214ENST00000466704 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
CALD1-214ENST00000466704 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
CALD1-214ENST00000466704 CENPCQ03188 943 aa7.77□□□□□ -1.17
CALD1-214ENST00000466704 TLR1Q15399 786 aa7.77□□□□□ -1.17
CALD1-214ENST00000466704 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.17
CALD1-214ENST00000466704 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
CALD1-214ENST00000466704 XAGE2Q96GT9 111 aa7.77□□□□□ -1.17
CALD1-214ENST00000466704 USP17L15C9J2P7 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L10C9JJH3 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L13C9JLJ4 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L12C9JPN9 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L11C9JVI0 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L21D6R901 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L18D6R9N7 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L22D6RA61 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L17D6RBQ6 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L19D6RCP7 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L20D6RJB6 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 WASLO00401 505 aaPredicted RBP7.76□□□□□ -1.17
CALD1-214ENST00000466704 BACH1O14867 736 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 USP17L24Q0WX57 530 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
CALD1-214ENST00000466704 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
CALD1-214ENST00000466704 ZSCAN10Q96SZ4 725 aaPredicted RBP7.76□□□□□ -1.17
CALD1-214ENST00000466704 FAM196BA6NMK8 535 aa7.75□□□□□ -1.17
CALD1-214ENST00000466704 TMEM214Q6NUQ4 689 aaKnown RBP7.75□□□□□ -1.17
CALD1-214ENST00000466704 SIX5Q8N196 739 aa7.75□□□□□ -1.17
CALD1-214ENST00000466704 PBXIP1Q96AQ6 731 aa7.75□□□□□ -1.17
CALD1-214ENST00000466704 ZNF358Q9NW07 568 aa7.75□□□□□ -1.17
CALD1-214ENST00000466704 SMTNP53814 917 aa7.74□□□□□ -1.17
CALD1-214ENST00000466704 PTK7Q13308 1070 aa7.74□□□□□ -1.17
CALD1-214ENST00000466704 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
CALD1-214ENST00000466704 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
CALD1-214ENST00000466704 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
CALD1-214ENST00000466704 RHOQP17081 205 aa7.73□□□□□ -1.17
CALD1-214ENST00000466704 SEC13P55735 322 aa7.73□□□□□ -1.17
CALD1-214ENST00000466704 DPYDQ12882 1025 aa7.73□□□□□ -1.17
CALD1-214ENST00000466704 GNASQ5JWF2 1037 aa7.73□□□□□ -1.17
CALD1-214ENST00000466704 ANKMY2Q8IV38 441 aa7.73□□□□□ -1.17
CALD1-214ENST00000466704 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
CALD1-214ENST00000466704 A6NJY4 79 aa7.72□□□□□ -1.17
CALD1-214ENST00000466704 POU4F2Q12837 409 aa7.72□□□□□ -1.17
CALD1-214ENST00000466704 FAM200AQ8TCP9 573 aa7.72□□□□□ -1.17
CALD1-214ENST00000466704 SLC4A9Q96Q91 983 aa7.72□□□□□ -1.17
CALD1-214ENST00000466704 FHDC1Q9C0D6 1143 aaPredicted RBP7.72□□□□□ -1.17
CALD1-214ENST00000466704 NOVA2Q9UNW9 492 aaKnown RBP7.72□□□□□ -1.17
CALD1-214ENST00000466704 TERTO14746 1132 aaKnown RBP7.71□□□□□ -1.18
CALD1-214ENST00000466704 TAS1R3Q7RTX0 852 aa7.71□□□□□ -1.18
CALD1-214ENST00000466704 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
CALD1-214ENST00000466704 SPATA31C2B4DYI2 1134 aa7.7□□□□□ -1.18
CALD1-214ENST00000466704 M0R2N6 131 aa7.7□□□□□ -1.18
CALD1-214ENST00000466704 PPP1R15AO75807 674 aaPredicted RBP7.7□□□□□ -1.18
CALD1-214ENST00000466704 SRPK2P78362 688 aaKnown RBP7.7□□□□□ -1.18
CALD1-214ENST00000466704 PTSQ03393 145 aa7.7□□□□□ -1.18
CALD1-214ENST00000466704 MTFR1Q15390 333 aa7.7□□□□□ -1.18
CALD1-214ENST00000466704 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
CALD1-214ENST00000466704 TNS4Q8IZW8 715 aa7.7□□□□□ -1.18
CALD1-214ENST00000466704 TSEN2Q8NCE0 465 aaKnown RBP7.7□□□□□ -1.18
CALD1-214ENST00000466704 RHBDD1Q8TEB9 315 aa7.7□□□□□ -1.18
CALD1-214ENST00000466704 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
CALD1-214ENST00000466704 DKK1O94907 266 aa7.69□□□□□ -1.18
CALD1-214ENST00000466704 ATG7O95352 703 aa7.69□□□□□ -1.18
CALD1-214ENST00000466704 PHKA2P46019 1235 aa7.69□□□□□ -1.18
CALD1-214ENST00000466704 NBPF10Q6P3W6 841 aaKnown RBP7.69□□□□□ -1.18
CALD1-214ENST00000466704 TIMMDC1Q9NPL8 285 aa7.69□□□□□ -1.18
CALD1-214ENST00000466704 CABP1Q9NZU7 370 aa7.69□□□□□ -1.18
CALD1-214ENST00000466704 ACIN1Q9UKV3 1341 aaKnown RBP7.69□□□□□ -1.18
CALD1-214ENST00000466704 CDK2AP1O14519 115 aa7.68□□□□□ -1.18
CALD1-214ENST00000466704 ELOAQ14241 798 aaKnown RBP7.68□□□□□ -1.18
CALD1-214ENST00000466704 ARXQ96QS3 562 aa7.68□□□□□ -1.18
CALD1-214ENST00000466704 NIFKQ9BYG3 293 aaKnown RBP7.68□□□□□ -1.18
CALD1-214ENST00000466704 NXF1Q9UBU9 619 aaKnown RBP7.68□□□□□ -1.18
CALD1-214ENST00000466704 SLC35F4A4IF30 521 aa7.67□□□□□ -1.18
CALD1-214ENST00000466704 PLA2G4AP47712 749 aa7.67□□□□□ -1.18
CALD1-214ENST00000466704 C4orf17Q53FE4 359 aa7.67□□□□□ -1.18
CALD1-214ENST00000466704 WDR44Q5JSH3 913 aa7.67□□□□□ -1.18
CALD1-214ENST00000466704 SLC9A9Q8IVB4 645 aa7.67□□□□□ -1.18
CALD1-214ENST00000466704 CCDC155Q8N6L0 562 aa7.67□□□□□ -1.18
CALD1-214ENST00000466704 SCHIP1Q9P0W5 487 aaPredicted RBP7.67□□□□□ -1.18
CALD1-214ENST00000466704 CHMP3Q9Y3E7 222 aa7.67□□□□□ -1.18
CALD1-214ENST00000466704 EPHA4P54764 986 aa7.66□□□□□ -1.18
CALD1-214ENST00000466704 TBCELQ5QJ74 424 aa7.66□□□□□ -1.18
CALD1-214ENST00000466704 AIDAQ96BJ3 306 aa7.66□□□□□ -1.18
CALD1-214ENST00000466704 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
CALD1-214ENST00000466704 TSPAN10Q9H1Z9 355 aaPredicted RBP7.66□□□□□ -1.18
CALD1-214ENST00000466704 ZMIZ1Q9ULJ6 1067 aa7.66□□□□□ -1.18
CALD1-214ENST00000466704 IQSEC3Q9UPP2 1182 aaPredicted RBP7.66□□□□□ -1.18
CALD1-214ENST00000466704 USP3Q9Y6I4 520 aa7.66□□□□□ -1.18
CALD1-214ENST00000466704 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
CALD1-214ENST00000466704 LGR5O75473 907 aa7.65□□□□□ -1.18
CALD1-214ENST00000466704 VEGFBP49765 207 aa7.65□□□□□ -1.18
CALD1-214ENST00000466704 SLC16A10Q8TF71 515 aa7.65□□□□□ -1.18
CALD1-214ENST00000466704 STK32AQ8WU08 396 aa7.65□□□□□ -1.18
CALD1-214ENST00000466704 KRTAP4-6Q9BYQ5 205 aa7.65□□□□□ -1.18
CALD1-214ENST00000466704 DYRK1BQ9Y463 629 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms