RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 LOC102724428A0A0B4J2F2 783 aa20.95■□□□□ 0.94
HMGXB4-206ENST00000466438 SIK1P57059 783 aa20.95■□□□□ 0.94
HMGXB4-206ENST00000466438 PIGBQ92521 554 aa20.94■□□□□ 0.94
HMGXB4-206ENST00000466438 COG3Q96JB2 828 aa20.94■□□□□ 0.94
HMGXB4-206ENST00000466438 CCDC87Q9NVE4 849 aa20.94■□□□□ 0.94
HMGXB4-206ENST00000466438 RNF181Q9P0P0 153 aa20.94■□□□□ 0.94
HMGXB4-206ENST00000466438 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
HMGXB4-206ENST00000466438 CYP27B1O15528 508 aa20.93■□□□□ 0.94
HMGXB4-206ENST00000466438 NLGN1Q8N2Q7 840 aa20.93■□□□□ 0.94
HMGXB4-206ENST00000466438 C4AP0C0L4 1744 aa20.92■□□□□ 0.94
HMGXB4-206ENST00000466438 L3MBTL2Q969R5 705 aa20.92■□□□□ 0.94
HMGXB4-206ENST00000466438 KCNA3P22001 575 aa20.91■□□□□ 0.94
HMGXB4-206ENST00000466438 FBLN1P23142 703 aa20.91■□□□□ 0.94
HMGXB4-206ENST00000466438 TMF1P82094 1093 aa20.91■□□□□ 0.94
HMGXB4-206ENST00000466438 DCAF5Q96JK2 942 aa20.91■□□□□ 0.94
HMGXB4-206ENST00000466438 PCDH10Q9P2E7 1040 aa20.91■□□□□ 0.94
HMGXB4-206ENST00000466438 ITPK1Q13572 414 aa20.9■□□□□ 0.94
HMGXB4-206ENST00000466438 PIM2Q9P1W9 311 aa20.89■□□□□ 0.93
HMGXB4-206ENST00000466438 ZC3H4Q9UPT8 1303 aaKnown RBP20.88■□□□□ 0.93
HMGXB4-206ENST00000466438 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
HMGXB4-206ENST00000466438 DALRD3Q5D0E6 543 aaKnown RBP20.87■□□□□ 0.93
HMGXB4-206ENST00000466438 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
HMGXB4-206ENST00000466438 SBF1O95248 1867 aa20.86■□□□□ 0.93
HMGXB4-206ENST00000466438 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
HMGXB4-206ENST00000466438 RTCBQ9Y3I0 505 aaKnown RBP20.86■□□□□ 0.93
HMGXB4-206ENST00000466438 PARP3Q9Y6F1 533 aa20.86■□□□□ 0.93
HMGXB4-206ENST00000466438 VEGFAP15692 232 aaPredicted RBP20.85■□□□□ 0.93
HMGXB4-206ENST00000466438 RRS1Q15050 365 aaKnown RBP20.85■□□□□ 0.93
HMGXB4-206ENST00000466438 GYS1P13807 737 aa20.84■□□□□ 0.93
HMGXB4-206ENST00000466438 PUS7Q96PZ0 661 aaKnown RBP20.83■□□□□ 0.93
HMGXB4-206ENST00000466438 TMOD3Q9NYL9 352 aa20.83■□□□□ 0.93
HMGXB4-206ENST00000466438 ASAP1Q9ULH1 1129 aa20.83■□□□□ 0.93
HMGXB4-206ENST00000466438 INSRP06213 1382 aa20.83■□□□□ 0.92
HMGXB4-206ENST00000466438 PRDM10Q9NQV6 1147 aa20.82■□□□□ 0.92
HMGXB4-206ENST00000466438 KDM6AO15550 1401 aaPredicted RBP20.81■□□□□ 0.92
HMGXB4-206ENST00000466438 GLTPD2A6NH11 291 aa20.81■□□□□ 0.92
HMGXB4-206ENST00000466438 ARHGEF1Q92888 912 aaKnown RBP20.81■□□□□ 0.92
HMGXB4-206ENST00000466438 KDRP35968 1356 aa20.8■□□□□ 0.92
HMGXB4-206ENST00000466438 FOXN1O15353 648 aa20.79■□□□□ 0.92
HMGXB4-206ENST00000466438 RFC4P35249 363 aa20.79■□□□□ 0.92
HMGXB4-206ENST00000466438 HSP90AB2PQ58FF8 381 aa20.79■□□□□ 0.92
HMGXB4-206ENST00000466438 ATG3Q9NT62 314 aa20.78■□□□□ 0.92
HMGXB4-206ENST00000466438 SPG7Q9UQ90 795 aa20.78■□□□□ 0.92
HMGXB4-206ENST00000466438 ZNF831Q5JPB2 1677 aa20.77■□□□□ 0.92
HMGXB4-206ENST00000466438 FLT4P35916 1363 aa20.77■□□□□ 0.92
HMGXB4-206ENST00000466438 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
HMGXB4-206ENST00000466438 RC3H1Q5TC82 1133 aaKnown RBP20.77■□□□□ 0.92
HMGXB4-206ENST00000466438 CREBZFQ9NS37 354 aa20.77■□□□□ 0.92
HMGXB4-206ENST00000466438 KIF24Q5T7B8 1368 aa20.76■□□□□ 0.91
HMGXB4-206ENST00000466438 RASSF7Q02833 373 aa20.76■□□□□ 0.91
HMGXB4-206ENST00000466438 MKRN1Q9UHC7 482 aaKnown RBP20.76■□□□□ 0.91
HMGXB4-206ENST00000466438 NCAPD2Q15021 1401 aa20.76■□□□□ 0.91
HMGXB4-206ENST00000466438 CNTNAP4Q9C0A0 1308 aa20.76■□□□□ 0.91
HMGXB4-206ENST00000466438 LMNB1P20700 586 aa20.75■□□□□ 0.91
HMGXB4-206ENST00000466438 CHRNA5P30532 468 aa20.75■□□□□ 0.91
HMGXB4-206ENST00000466438 TRIM26Q12899 539 aaPredicted RBP20.75■□□□□ 0.91
HMGXB4-206ENST00000466438 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
HMGXB4-206ENST00000466438 RPS6KA4O75676 772 aa20.74■□□□□ 0.91
HMGXB4-206ENST00000466438 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
HMGXB4-206ENST00000466438 CTCFP49711 727 aaPredicted RBP20.73■□□□□ 0.91
HMGXB4-206ENST00000466438 SLC4A9Q96Q91 983 aa20.73■□□□□ 0.91
HMGXB4-206ENST00000466438 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
HMGXB4-206ENST00000466438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.91
HMGXB4-206ENST00000466438 POTECB2RU33 542 aa20.71■□□□□ 0.91
HMGXB4-206ENST00000466438 FYB1O15117 783 aa20.71■□□□□ 0.91
HMGXB4-206ENST00000466438 DDR1Q08345 913 aa20.71■□□□□ 0.91
HMGXB4-206ENST00000466438 AIDAQ96BJ3 306 aa20.71■□□□□ 0.91
HMGXB4-206ENST00000466438 GGNBP2Q9H3C7 697 aa20.71■□□□□ 0.91
HMGXB4-206ENST00000466438 CNTNAP1P78357 1384 aa20.71■□□□□ 0.91
HMGXB4-206ENST00000466438 PHKG2P15735 406 aa20.69■□□□□ 0.9
HMGXB4-206ENST00000466438 FKBP8Q14318 412 aa20.69■□□□□ 0.9
HMGXB4-206ENST00000466438 IFNL2Q8IZJ0 200 aa20.69■□□□□ 0.9
HMGXB4-206ENST00000466438 RBM42Q9BTD8 480 aaKnown RBP20.69■□□□□ 0.9
HMGXB4-206ENST00000466438 ABHD8Q96I13 439 aa20.68■□□□□ 0.9
HMGXB4-206ENST00000466438 USP42Q9H9J4 1324 aaKnown RBP20.68■□□□□ 0.9
HMGXB4-206ENST00000466438 TONSLQ96HA7 1378 aa20.68■□□□□ 0.9
HMGXB4-206ENST00000466438 MYH14Q7Z406 1995 aaKnown RBP20.67■□□□□ 0.9
HMGXB4-206ENST00000466438 CHADLQ6NUI6 762 aa20.67■□□□□ 0.9
HMGXB4-206ENST00000466438 SRP68Q9UHB9 627 aaKnown RBP20.67■□□□□ 0.9
HMGXB4-206ENST00000466438 DPY19L2Q6NUT2 758 aa20.66■□□□□ 0.9
HMGXB4-206ENST00000466438 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
HMGXB4-206ENST00000466438 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
HMGXB4-206ENST00000466438 LBX1P52954 281 aa20.64■□□□□ 0.89
HMGXB4-206ENST00000466438 MLLT1Q03111 559 aaPredicted RBP20.64■□□□□ 0.89
HMGXB4-206ENST00000466438 CCDC88AQ3V6T2 1871 aa20.63■□□□□ 0.89
HMGXB4-206ENST00000466438 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
HMGXB4-206ENST00000466438 DLEC1Q9Y238 1755 aa20.63■□□□□ 0.89
HMGXB4-206ENST00000466438 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
HMGXB4-206ENST00000466438 NFKBIEO00221 500 aa20.62■□□□□ 0.89
HMGXB4-206ENST00000466438 TM4SF1P30408 202 aa20.62■□□□□ 0.89
HMGXB4-206ENST00000466438 KIF20BQ96Q89 1820 aa20.62■□□□□ 0.89
HMGXB4-206ENST00000466438 CRKLP46109 303 aaKnown RBP20.61■□□□□ 0.89
HMGXB4-206ENST00000466438 EMILIN1Q9Y6C2 1016 aa20.61■□□□□ 0.89
HMGXB4-206ENST00000466438 VEGFBP49765 207 aa20.6■□□□□ 0.89
HMGXB4-206ENST00000466438 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
HMGXB4-206ENST00000466438 TTLL6Q8N841 843 aa20.6■□□□□ 0.89
HMGXB4-206ENST00000466438 TESK2Q96S53 571 aa20.6■□□□□ 0.89
HMGXB4-206ENST00000466438 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
HMGXB4-206ENST00000466438 PASKQ96RG2 1323 aa20.59■□□□□ 0.89
HMGXB4-206ENST00000466438 RGS19P49795 217 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms