RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 FAM98CQ17RN3 349 aaKnown RBP15.62■□□□□ 0.09
VPS16-206ENST00000466415 ZNF428Q96B54 188 aa15.62■□□□□ 0.09
VPS16-206ENST00000466415 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
VPS16-206ENST00000466415 ATRNO75882 1429 aa15.61■□□□□ 0.09
VPS16-206ENST00000466415 RARSP54136 660 aaKnown RBP15.61■□□□□ 0.09
VPS16-206ENST00000466415 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
VPS16-206ENST00000466415 SMC4Q9NTJ3 1288 aa15.61■□□□□ 0.09
VPS16-206ENST00000466415 SIPA1L3O60292 1781 aaPredicted RBP15.61■□□□□ 0.09
VPS16-206ENST00000466415 ERVV-2B6SEH9 535 aa15.6■□□□□ 0.09
VPS16-206ENST00000466415 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
VPS16-206ENST00000466415 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
VPS16-206ENST00000466415 RNF123Q5XPI4 1314 aa15.6■□□□□ 0.09
VPS16-206ENST00000466415 FKBP8Q14318 412 aa15.59■□□□□ 0.09
VPS16-206ENST00000466415 ALDH1L2Q3SY69 923 aa15.59■□□□□ 0.09
VPS16-206ENST00000466415 TTC5Q8N0Z6 440 aa15.59■□□□□ 0.09
VPS16-206ENST00000466415 TSPYL6Q8N831 410 aa15.59■□□□□ 0.09
VPS16-206ENST00000466415 GJD4Q96KN9 370 aaPredicted RBP15.59■□□□□ 0.09
VPS16-206ENST00000466415 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
VPS16-206ENST00000466415 GLI3P10071 1580 aa15.58■□□□□ 0.09
VPS16-206ENST00000466415 VAMP4O75379 141 aa15.58■□□□□ 0.08
VPS16-206ENST00000466415 BCAR3O75815 825 aa15.58■□□□□ 0.08
VPS16-206ENST00000466415 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
VPS16-206ENST00000466415 NFATC2IPQ8NCF5 419 aa15.58■□□□□ 0.08
VPS16-206ENST00000466415 SOS1Q07889 1333 aaPredicted RBP15.58■□□□□ 0.08
VPS16-206ENST00000466415 TOGARAM1Q9Y4F4 1720 aa15.57■□□□□ 0.08
VPS16-206ENST00000466415 KRT24Q2M2I5 525 aa15.57■□□□□ 0.08
VPS16-206ENST00000466415 QTRT2Q9H974 415 aaKnown RBP15.57■□□□□ 0.08
VPS16-206ENST00000466415 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
VPS16-206ENST00000466415 KIF16BQ96L93 1317 aa15.57■□□□□ 0.08
VPS16-206ENST00000466415 THSD7AQ9UPZ6 1657 aa15.57■□□□□ 0.08
VPS16-206ENST00000466415 PLIN1O60240 522 aa15.56■□□□□ 0.08
VPS16-206ENST00000466415 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
VPS16-206ENST00000466415 ZNF772Q68DY9 489 aaPredicted RBP15.56■□□□□ 0.08
VPS16-206ENST00000466415 SSH1Q8WYL5 1049 aa15.56■□□□□ 0.08
VPS16-206ENST00000466415 FRAT1Q92837 279 aaPredicted RBP15.56■□□□□ 0.08
VPS16-206ENST00000466415 CHMP4AQ9BY43 222 aa15.56■□□□□ 0.08
VPS16-206ENST00000466415 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
VPS16-206ENST00000466415 DOT1LQ8TEK3 1739 aa15.54■□□□□ 0.08
VPS16-206ENST00000466415 KCNQ3O43525 872 aa15.54■□□□□ 0.08
VPS16-206ENST00000466415 HOXB7P09629 217 aa15.54■□□□□ 0.08
VPS16-206ENST00000466415 SLC39A6Q13433 755 aa15.54■□□□□ 0.08
VPS16-206ENST00000466415 SYTL4Q96C24 671 aaPredicted RBP15.54■□□□□ 0.08
VPS16-206ENST00000466415 STK31Q9BXU1 1019 aa15.54■□□□□ 0.08
VPS16-206ENST00000466415 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
VPS16-206ENST00000466415 CCDC30Q5VVM6 783 aa15.53■□□□□ 0.08
VPS16-206ENST00000466415 MARCH10Q8NA82 808 aaPredicted RBP15.53■□□□□ 0.08
VPS16-206ENST00000466415 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
VPS16-206ENST00000466415 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.08
VPS16-206ENST00000466415 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.08
VPS16-206ENST00000466415 MS4A1P11836 297 aa15.52■□□□□ 0.08
VPS16-206ENST00000466415 ZKSCAN2Q63HK3 967 aa15.52■□□□□ 0.08
VPS16-206ENST00000466415 MRPL50Q8N5N7 158 aaKnown RBP15.52■□□□□ 0.08
VPS16-206ENST00000466415 PAPPAQ13219 1627 aa15.52■□□□□ 0.08
VPS16-206ENST00000466415 FTSJ3Q8IY81 847 aaKnown RBP15.51■□□□□ 0.07
VPS16-206ENST00000466415 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
VPS16-206ENST00000466415 BRPF1P55201 1214 aaPredicted RBP15.5■□□□□ 0.07
VPS16-206ENST00000466415 ERICH6BQ5W0A0 696 aa15.5■□□□□ 0.07
VPS16-206ENST00000466415 SEPT12Q8IYM1 358 aa15.5■□□□□ 0.07
VPS16-206ENST00000466415 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
VPS16-206ENST00000466415 NOB1Q9ULX3 412 aaKnown RBP15.5■□□□□ 0.07
VPS16-206ENST00000466415 BCL9O00512 1426 aa15.5■□□□□ 0.07
VPS16-206ENST00000466415 GIGYF1O75420 1035 aaPredicted RBP15.49■□□□□ 0.07
VPS16-206ENST00000466415 RBM6P78332 1123 aaKnown RBP15.49■□□□□ 0.07
VPS16-206ENST00000466415 ACSBG1Q96GR2 724 aa15.49■□□□□ 0.07
VPS16-206ENST00000466415 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
VPS16-206ENST00000466415 ITGB4P16144 1822 aa15.49■□□□□ 0.07
VPS16-206ENST00000466415 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
VPS16-206ENST00000466415 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
VPS16-206ENST00000466415 PDE3AQ14432 1141 aa15.48■□□□□ 0.07
VPS16-206ENST00000466415 ATF7IPQ6VMQ6 1270 aa15.48■□□□□ 0.07
VPS16-206ENST00000466415 PIGBQ92521 554 aa15.48■□□□□ 0.07
VPS16-206ENST00000466415 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
VPS16-206ENST00000466415 KCPQ6ZWJ8 1503 aa15.48■□□□□ 0.07
VPS16-206ENST00000466415 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
VPS16-206ENST00000466415 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
VPS16-206ENST00000466415 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
VPS16-206ENST00000466415 C20orf194Q5TEA3 1177 aa15.47■□□□□ 0.07
VPS16-206ENST00000466415 DZIP1LQ8IYY4 767 aaKnown RBP15.47■□□□□ 0.07
VPS16-206ENST00000466415 CRBNQ96SW2 442 aa15.47■□□□□ 0.07
VPS16-206ENST00000466415 API5Q9BZZ5 524 aaKnown RBP15.47■□□□□ 0.07
VPS16-206ENST00000466415 C5P01031 1676 aa15.47■□□□□ 0.07
VPS16-206ENST00000466415 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
VPS16-206ENST00000466415 PTPRCP08575 1304 aa15.46■□□□□ 0.07
VPS16-206ENST00000466415 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
VPS16-206ENST00000466415 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
VPS16-206ENST00000466415 TRIM27P14373 513 aa15.45■□□□□ 0.06
VPS16-206ENST00000466415 PANK1Q8TE04 598 aa15.45■□□□□ 0.06
VPS16-206ENST00000466415 ARHGAP45Q92619 1136 aa15.45■□□□□ 0.06
VPS16-206ENST00000466415 ATG3Q9NT62 314 aa15.45■□□□□ 0.06
VPS16-206ENST00000466415 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
VPS16-206ENST00000466415 PRAMEF22A3QJZ6 481 aa15.44■□□□□ 0.06
VPS16-206ENST00000466415 RXRBP28702 533 aa15.44■□□□□ 0.06
VPS16-206ENST00000466415 EXOC6Q8TAG9 804 aa15.44■□□□□ 0.06
VPS16-206ENST00000466415 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
VPS16-206ENST00000466415 CHPF2Q9P2E5 772 aa15.44■□□□□ 0.06
VPS16-206ENST00000466415 DBF4Q9UBU7 674 aaPredicted RBP15.44■□□□□ 0.06
VPS16-206ENST00000466415 KRT27Q7Z3Y8 459 aa15.43■□□□□ 0.06
VPS16-206ENST00000466415 SMARCC1Q92922 1105 aaPredicted RBP15.43■□□□□ 0.06
VPS16-206ENST00000466415 TNNQ9UQP3 1299 aa15.43■□□□□ 0.06
VPS16-206ENST00000466415 NHSQ6T4R5 1651 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms