RNA–Protein interactions for RNA: ENST00000466199.1

EIF3B-208, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-208ENST00000466199 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.53
EIF3B-208ENST00000466199 PIGBQ92521 554 aa11.77□□□□□ -0.53
EIF3B-208ENST00000466199 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
EIF3B-208ENST00000466199 NRAPQ86VF7 1730 aa11.77□□□□□ -0.53
EIF3B-208ENST00000466199 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
EIF3B-208ENST00000466199 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
EIF3B-208ENST00000466199 FAM182BQ5T319 152 aa11.76□□□□□ -0.53
EIF3B-208ENST00000466199 DUSP27Q5VZP5 1158 aa11.76□□□□□ -0.53
EIF3B-208ENST00000466199 ZNF790Q6PG37 636 aa11.76□□□□□ -0.53
EIF3B-208ENST00000466199 FMNL2Q96PY5 1086 aa11.76□□□□□ -0.53
EIF3B-208ENST00000466199 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
EIF3B-208ENST00000466199 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.76□□□□□ -0.53
EIF3B-208ENST00000466199 ELL2O00472 640 aaPredicted RBP11.75□□□□□ -0.53
EIF3B-208ENST00000466199 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
EIF3B-208ENST00000466199 TEX13AQ9BXU3 409 aaPredicted RBP11.75□□□□□ -0.53
EIF3B-208ENST00000466199 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
EIF3B-208ENST00000466199 FANCIQ9NVI1 1328 aa11.75□□□□□ -0.53
EIF3B-208ENST00000466199 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
EIF3B-208ENST00000466199 ZNF428Q96B54 188 aa11.74□□□□□ -0.53
EIF3B-208ENST00000466199 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
EIF3B-208ENST00000466199 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
EIF3B-208ENST00000466199 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
EIF3B-208ENST00000466199 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
EIF3B-208ENST00000466199 KCNQ2O43526 872 aa11.73□□□□□ -0.53
EIF3B-208ENST00000466199 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
EIF3B-208ENST00000466199 SNRPA1P09661 255 aaKnown RBP11.73□□□□□ -0.53
EIF3B-208ENST00000466199 GLI3P10071 1580 aa11.73□□□□□ -0.53
EIF3B-208ENST00000466199 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
EIF3B-208ENST00000466199 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
EIF3B-208ENST00000466199 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
EIF3B-208ENST00000466199 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
EIF3B-208ENST00000466199 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
EIF3B-208ENST00000466199 KCNQ3O43525 872 aa11.72□□□□□ -0.53
EIF3B-208ENST00000466199 TRIM37O94972 964 aa11.72□□□□□ -0.53
EIF3B-208ENST00000466199 STARD3NLO95772 234 aa11.72□□□□□ -0.53
EIF3B-208ENST00000466199 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
EIF3B-208ENST00000466199 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
EIF3B-208ENST00000466199 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
EIF3B-208ENST00000466199 STK31Q9BXU1 1019 aa11.72□□□□□ -0.53
EIF3B-208ENST00000466199 RCAN3Q9UKA8 241 aa11.72□□□□□ -0.53
EIF3B-208ENST00000466199 HOXB7P09629 217 aa11.71□□□□□ -0.53
EIF3B-208ENST00000466199 EIF2S2P20042 333 aaKnown RBP11.71□□□□□ -0.53
EIF3B-208ENST00000466199 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
EIF3B-208ENST00000466199 UPF1Q92900 1129 aaKnown RBP eCLIP11.71□□□□□ -0.53
EIF3B-208ENST00000466199 ZNF496Q96IT1 587 aaPredicted RBP11.71□□□□□ -0.53
EIF3B-208ENST00000466199 BCL9O00512 1426 aa11.7□□□□□ -0.54
EIF3B-208ENST00000466199 VAMP4O75379 141 aa11.7□□□□□ -0.54
EIF3B-208ENST00000466199 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
EIF3B-208ENST00000466199 APBA3O96018 575 aa11.7□□□□□ -0.54
EIF3B-208ENST00000466199 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
EIF3B-208ENST00000466199 RGS12O14924 1447 aa11.69□□□□□ -0.54
EIF3B-208ENST00000466199 IPO8O15397 1037 aaKnown RBP11.69□□□□□ -0.54
EIF3B-208ENST00000466199 ATP6V1AP38606 617 aa11.69□□□□□ -0.54
EIF3B-208ENST00000466199 ALDH1L2Q3SY69 923 aa11.69□□□□□ -0.54
EIF3B-208ENST00000466199 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
EIF3B-208ENST00000466199 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
EIF3B-208ENST00000466199 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
EIF3B-208ENST00000466199 LOC102724428A0A0B4J2F2 783 aa11.68□□□□□ -0.54
EIF3B-208ENST00000466199 CANXP27824 592 aaKnown RBP11.68□□□□□ -0.54
EIF3B-208ENST00000466199 SIK1P57059 783 aa11.68□□□□□ -0.54
EIF3B-208ENST00000466199 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
EIF3B-208ENST00000466199 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
EIF3B-208ENST00000466199 RARSP54136 660 aaKnown RBP11.67□□□□□ -0.54
EIF3B-208ENST00000466199 KRT24Q2M2I5 525 aa11.67□□□□□ -0.54
EIF3B-208ENST00000466199 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
EIF3B-208ENST00000466199 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
EIF3B-208ENST00000466199 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
EIF3B-208ENST00000466199 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
EIF3B-208ENST00000466199 THSD7AQ9UPZ6 1657 aa11.66□□□□□ -0.54
EIF3B-208ENST00000466199 PLSCR1O15162 318 aa11.66□□□□□ -0.54
EIF3B-208ENST00000466199 MS4A1P11836 297 aa11.66□□□□□ -0.54
EIF3B-208ENST00000466199 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
EIF3B-208ENST00000466199 CCNL1Q9UK58 526 aaPredicted RBP11.66□□□□□ -0.54
EIF3B-208ENST00000466199 PALLDQ8WX93 1383 aa11.66□□□□□ -0.54
EIF3B-208ENST00000466199 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
EIF3B-208ENST00000466199 SLC27A3Q5K4L6 730 aa11.65□□□□□ -0.54
EIF3B-208ENST00000466199 PTF1AQ7RTS3 328 aa11.65□□□□□ -0.54
EIF3B-208ENST00000466199 DNAJC10Q8IXB1 793 aa11.65□□□□□ -0.54
EIF3B-208ENST00000466199 SSH1Q8WYL5 1049 aa11.65□□□□□ -0.54
EIF3B-208ENST00000466199 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
EIF3B-208ENST00000466199 LRRC37A3O60309 1634 aa11.64□□□□□ -0.55
EIF3B-208ENST00000466199 TCERG1O14776 1098 aaKnown RBP11.64□□□□□ -0.55
EIF3B-208ENST00000466199 BAG6P46379 1132 aa11.64□□□□□ -0.55
EIF3B-208ENST00000466199 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
EIF3B-208ENST00000466199 ARXQ96QS3 562 aa11.64□□□□□ -0.55
EIF3B-208ENST00000466199 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
EIF3B-208ENST00000466199 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
EIF3B-208ENST00000466199 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
EIF3B-208ENST00000466199 NEFLP07196 543 aa11.63□□□□□ -0.55
EIF3B-208ENST00000466199 DDX21Q9NR30 783 aaKnown RBP eCLIP11.63□□□□□ -0.55
EIF3B-208ENST00000466199 MRC1P22897 1456 aa11.63□□□□□ -0.55
EIF3B-208ENST00000466199 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
EIF3B-208ENST00000466199 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
EIF3B-208ENST00000466199 BCAR3O75815 825 aa11.62□□□□□ -0.55
EIF3B-208ENST00000466199 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
EIF3B-208ENST00000466199 MYL6BP14649 208 aa11.62□□□□□ -0.55
EIF3B-208ENST00000466199 BRPF1P55201 1214 aaPredicted RBP11.62□□□□□ -0.55
EIF3B-208ENST00000466199 TXNRD1Q16881 649 aa11.62□□□□□ -0.55
EIF3B-208ENST00000466199 RC3H1Q5TC82 1133 aaKnown RBP11.62□□□□□ -0.55
EIF3B-208ENST00000466199 ZKSCAN2Q63HK3 967 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms