RNA–Protein interactions for RNA: ENST00000466199.1

EIF3B-208, Transcript of eukaryotic translation initiation factor 3 subunit B, human

TSL 2

Gene EIF3B, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3B-208	ENST00000466199	TRMT2A	Q8IZ69	625 aa	Known RBP	11.77	□□□□□ -0.53
EIF3B-208	ENST00000466199	PIGB	Q92521	554 aa		11.77	□□□□□ -0.53
EIF3B-208	ENST00000466199	TSR2	Q969E8	191 aa	Known RBP	11.77	□□□□□ -0.53
EIF3B-208	ENST00000466199	NRAP	Q86VF7	1730 aa		11.77	□□□□□ -0.53
EIF3B-208	ENST00000466199	CT47B1	P0C2W7	299 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	EXOSC9	Q06265	439 aa	Known RBP	11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	FAM182B	Q5T319	152 aa		11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	DUSP27	Q5VZP5	1158 aa		11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	ZNF790	Q6PG37	636 aa		11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	FMNL2	Q96PY5	1086 aa		11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.76	□□□□□ -0.53
EIF3B-208	ENST00000466199	ELL2	O00472	640 aa	Predicted RBP	11.75	□□□□□ -0.53
EIF3B-208	ENST00000466199	SLC39A6	Q13433	755 aa		11.75	□□□□□ -0.53
EIF3B-208	ENST00000466199	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.75	□□□□□ -0.53
EIF3B-208	ENST00000466199	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.75	□□□□□ -0.53
EIF3B-208	ENST00000466199	FANCI	Q9NVI1	1328 aa		11.75	□□□□□ -0.53
EIF3B-208	ENST00000466199	KAT6B	Q8WYB5	2073 aa		11.75	□□□□□ -0.53
EIF3B-208	ENST00000466199	ZNF428	Q96B54	188 aa		11.74	□□□□□ -0.53
EIF3B-208	ENST00000466199	RBM42	Q9BTD8	480 aa	Known RBP	11.74	□□□□□ -0.53
EIF3B-208	ENST00000466199	SOS1	Q07889	1333 aa	Predicted RBP	11.74	□□□□□ -0.53
EIF3B-208	ENST00000466199	PARP4	Q9UKK3	1724 aa	Known RBP	11.74	□□□□□ -0.53
EIF3B-208	ENST00000466199	KDM6A	O15550	1401 aa	Predicted RBP	11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	KCNQ2	O43526	872 aa		11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	PTCD1	O75127	700 aa	Known RBP	11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	SNRPA1	P09661	255 aa	Known RBP	11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	GLI3	P10071	1580 aa		11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	EIF4A1	P60842	406 aa	Known RBP	11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	SF3B2	Q13435	895 aa	Known RBP	11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	TWISTNB	Q3B726	338 aa	Predicted RBP	11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	ATG3	Q9NT62	314 aa		11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	ASAP1	Q9ULH1	1129 aa		11.73	□□□□□ -0.53
EIF3B-208	ENST00000466199	KCNQ3	O43525	872 aa		11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	TRIM37	O94972	964 aa		11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	STARD3NL	O95772	234 aa		11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	CCDC30	Q5VVM6	783 aa		11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	NPM2	Q86SE8	214 aa	Known RBP	11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	C8orf58	Q8NAV2	365 aa		11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	STK31	Q9BXU1	1019 aa		11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	RCAN3	Q9UKA8	241 aa		11.72	□□□□□ -0.53
EIF3B-208	ENST00000466199	HOXB7	P09629	217 aa		11.71	□□□□□ -0.53
EIF3B-208	ENST00000466199	EIF2S2	P20042	333 aa	Known RBP	11.71	□□□□□ -0.53
EIF3B-208	ENST00000466199	VSIG10	Q8N0Z9	540 aa		11.71	□□□□□ -0.53
EIF3B-208	ENST00000466199	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
EIF3B-208	ENST00000466199	ZNF496	Q96IT1	587 aa	Predicted RBP	11.71	□□□□□ -0.53
EIF3B-208	ENST00000466199	BCL9	O00512	1426 aa		11.7	□□□□□ -0.54
EIF3B-208	ENST00000466199	VAMP4	O75379	141 aa		11.7	□□□□□ -0.54
EIF3B-208	ENST00000466199	GIGYF1	O75420	1035 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF3B-208	ENST00000466199	APBA3	O96018	575 aa		11.7	□□□□□ -0.54
EIF3B-208	ENST00000466199	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.7	□□□□□ -0.54
EIF3B-208	ENST00000466199	RGS12	O14924	1447 aa		11.69	□□□□□ -0.54
EIF3B-208	ENST00000466199	IPO8	O15397	1037 aa	Known RBP	11.69	□□□□□ -0.54
EIF3B-208	ENST00000466199	ATP6V1A	P38606	617 aa		11.69	□□□□□ -0.54
EIF3B-208	ENST00000466199	ALDH1L2	Q3SY69	923 aa		11.69	□□□□□ -0.54
EIF3B-208	ENST00000466199	HDGFL1	Q5TGJ6	251 aa		11.69	□□□□□ -0.54
EIF3B-208	ENST00000466199	CCDC125	Q86Z20	511 aa		11.69	□□□□□ -0.54
EIF3B-208	ENST00000466199	PKD1L3	Q7Z443	1732 aa		11.69	□□□□□ -0.54
EIF3B-208	ENST00000466199	LOC102724428	A0A0B4J2F2	783 aa		11.68	□□□□□ -0.54
EIF3B-208	ENST00000466199	CANX	P27824	592 aa	Known RBP	11.68	□□□□□ -0.54
EIF3B-208	ENST00000466199	SIK1	P57059	783 aa		11.68	□□□□□ -0.54
EIF3B-208	ENST00000466199	TSPYL6	Q8N831	410 aa		11.68	□□□□□ -0.54
EIF3B-208	ENST00000466199	SLC4A2	P04920	1241 aa		11.67	□□□□□ -0.54
EIF3B-208	ENST00000466199	RARS	P54136	660 aa	Known RBP	11.67	□□□□□ -0.54
EIF3B-208	ENST00000466199	KRT24	Q2M2I5	525 aa		11.67	□□□□□ -0.54
EIF3B-208	ENST00000466199	NECTIN2	Q92692	538 aa		11.67	□□□□□ -0.54
EIF3B-208	ENST00000466199	SMC4	Q9NTJ3	1288 aa		11.67	□□□□□ -0.54
EIF3B-208	ENST00000466199	DBF4	Q9UBU7	674 aa	Predicted RBP	11.67	□□□□□ -0.54
EIF3B-208	ENST00000466199	HEG1	Q9ULI3	1381 aa		11.67	□□□□□ -0.54
EIF3B-208	ENST00000466199	THSD7A	Q9UPZ6	1657 aa		11.66	□□□□□ -0.54
EIF3B-208	ENST00000466199	PLSCR1	O15162	318 aa		11.66	□□□□□ -0.54
EIF3B-208	ENST00000466199	MS4A1	P11836	297 aa		11.66	□□□□□ -0.54
EIF3B-208	ENST00000466199	HYPK	Q9NX55	129 aa		11.66	□□□□□ -0.54
EIF3B-208	ENST00000466199	CCNL1	Q9UK58	526 aa	Predicted RBP	11.66	□□□□□ -0.54
EIF3B-208	ENST00000466199	PALLD	Q8WX93	1383 aa		11.66	□□□□□ -0.54
EIF3B-208	ENST00000466199	DLG5	Q8TDM6	1919 aa		11.65	□□□□□ -0.54
EIF3B-208	ENST00000466199	SLC27A3	Q5K4L6	730 aa		11.65	□□□□□ -0.54
EIF3B-208	ENST00000466199	PTF1A	Q7RTS3	328 aa		11.65	□□□□□ -0.54
EIF3B-208	ENST00000466199	DNAJC10	Q8IXB1	793 aa		11.65	□□□□□ -0.54
EIF3B-208	ENST00000466199	SSH1	Q8WYL5	1049 aa		11.65	□□□□□ -0.54
EIF3B-208	ENST00000466199	USP16	Q9Y5T5	823 aa		11.65	□□□□□ -0.54
EIF3B-208	ENST00000466199	LRRC37A3	O60309	1634 aa		11.64	□□□□□ -0.55
EIF3B-208	ENST00000466199	TCERG1	O14776	1098 aa	Known RBP	11.64	□□□□□ -0.55
EIF3B-208	ENST00000466199	BAG6	P46379	1132 aa		11.64	□□□□□ -0.55
EIF3B-208	ENST00000466199	FRAT1	Q92837	279 aa	Predicted RBP	11.64	□□□□□ -0.55
EIF3B-208	ENST00000466199	ARX	Q96QS3	562 aa		11.64	□□□□□ -0.55
EIF3B-208	ENST00000466199	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.64	□□□□□ -0.55
EIF3B-208	ENST00000466199	ERBB4	Q15303	1308 aa		11.63	□□□□□ -0.55
EIF3B-208	ENST00000466199	DDX58	O95786	925 aa	Known RBP	11.63	□□□□□ -0.55
EIF3B-208	ENST00000466199	NEFL	P07196	543 aa		11.63	□□□□□ -0.55
EIF3B-208	ENST00000466199	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
EIF3B-208	ENST00000466199	MRC1	P22897	1456 aa		11.63	□□□□□ -0.55
EIF3B-208	ENST00000466199	SCN11A	Q9UI33	1791 aa		11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	PRAMEF22	A3QJZ6	481 aa		11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	BCAR3	O75815	825 aa		11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	CYP19A1	P11511	503 aa	Predicted RBP	11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	MYL6B	P14649	208 aa		11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	BRPF1	P55201	1214 aa	Predicted RBP	11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	TXNRD1	Q16881	649 aa		11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	RC3H1	Q5TC82	1133 aa	Known RBP	11.62	□□□□□ -0.55
EIF3B-208	ENST00000466199	ZKSCAN2	Q63HK3	967 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms