RNA–Protein interactions for RNA: ENST00000466195.1

TSPAN13-202, Transcript of tetraspanin 13, humanhuman

TSL 4

Gene TSPAN13, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-202ENST00000466195 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
TSPAN13-202ENST00000466195 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
TSPAN13-202ENST00000466195 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
TSPAN13-202ENST00000466195 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
TSPAN13-202ENST00000466195 ARXQ96QS3 562 aa17.07■□□□□ 0.32
TSPAN13-202ENST00000466195 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
TSPAN13-202ENST00000466195 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
TSPAN13-202ENST00000466195 ATG3Q9NT62 314 aa17.06■□□□□ 0.32
TSPAN13-202ENST00000466195 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
TSPAN13-202ENST00000466195 SCN11AQ9UI33 1791 aa17.05■□□□□ 0.32
TSPAN13-202ENST00000466195 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
TSPAN13-202ENST00000466195 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
TSPAN13-202ENST00000466195 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
TSPAN13-202ENST00000466195 NFATC2IPQ8NCF5 419 aa17.03■□□□□ 0.32
TSPAN13-202ENST00000466195 FHDC1Q9C0D6 1143 aaPredicted RBP17.03■□□□□ 0.32
TSPAN13-202ENST00000466195 PHF14O94880 888 aa17.02■□□□□ 0.32
TSPAN13-202ENST00000466195 MTHFSDQ2M296 383 aaKnown RBP17.02■□□□□ 0.32
TSPAN13-202ENST00000466195 KLHL34Q8N239 644 aa17.02■□□□□ 0.32
TSPAN13-202ENST00000466195 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.32
TSPAN13-202ENST00000466195 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
TSPAN13-202ENST00000466195 VIRMAQ69YN4 1812 aaKnown RBP17.01■□□□□ 0.31
TSPAN13-202ENST00000466195 SSFA2P28290 1259 aa17.01■□□□□ 0.31
TSPAN13-202ENST00000466195 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
TSPAN13-202ENST00000466195 SYT17Q9BSW7 474 aa17.01■□□□□ 0.31
TSPAN13-202ENST00000466195 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
TSPAN13-202ENST00000466195 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
TSPAN13-202ENST00000466195 GNPATO15228 680 aa17■□□□□ 0.31
TSPAN13-202ENST00000466195 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
TSPAN13-202ENST00000466195 ITPK1Q13572 414 aa17■□□□□ 0.31
TSPAN13-202ENST00000466195 COL24A1Q17RW2 1714 aa17■□□□□ 0.31
TSPAN13-202ENST00000466195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
TSPAN13-202ENST00000466195 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
TSPAN13-202ENST00000466195 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
TSPAN13-202ENST00000466195 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.315e-13■■■□□ 18.8
TSPAN13-202ENST00000466195 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
TSPAN13-202ENST00000466195 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
TSPAN13-202ENST00000466195 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
TSPAN13-202ENST00000466195 RTCBQ9Y3I0 505 aaKnown RBP16.98■□□□□ 0.31
TSPAN13-202ENST00000466195 MAP3K5Q99683 1374 aa16.98■□□□□ 0.31
TSPAN13-202ENST00000466195 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
TSPAN13-202ENST00000466195 NEFMP07197 916 aa16.97■□□□□ 0.31
TSPAN13-202ENST00000466195 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
TSPAN13-202ENST00000466195 MRC1P22897 1456 aa16.97■□□□□ 0.31
TSPAN13-202ENST00000466195 COL5A3P25940 1745 aaPredicted RBP16.96■□□□□ 0.31
TSPAN13-202ENST00000466195 TEFQ10587 303 aa16.96■□□□□ 0.31
TSPAN13-202ENST00000466195 RC3H1Q5TC82 1133 aaKnown RBP16.96■□□□□ 0.31
TSPAN13-202ENST00000466195 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
TSPAN13-202ENST00000466195 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
TSPAN13-202ENST00000466195 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
TSPAN13-202ENST00000466195 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
TSPAN13-202ENST00000466195 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
TSPAN13-202ENST00000466195 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
TSPAN13-202ENST00000466195 FCHSD2O94868 740 aa16.94■□□□□ 0.3
TSPAN13-202ENST00000466195 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
TSPAN13-202ENST00000466195 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
TSPAN13-202ENST00000466195 RALBP1Q15311 655 aa16.93■□□□□ 0.3
TSPAN13-202ENST00000466195 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
TSPAN13-202ENST00000466195 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
TSPAN13-202ENST00000466195 AMIGO3Q86WK7 504 aa16.93■□□□□ 0.3
TSPAN13-202ENST00000466195 RPS6KA4O75676 772 aa16.92■□□□□ 0.3
TSPAN13-202ENST00000466195 RFC4P35249 363 aa16.92■□□□□ 0.3
TSPAN13-202ENST00000466195 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
TSPAN13-202ENST00000466195 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
TSPAN13-202ENST00000466195 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
TSPAN13-202ENST00000466195 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
TSPAN13-202ENST00000466195 TJP1Q07157 1748 aa16.91■□□□□ 0.3
TSPAN13-202ENST00000466195 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
TSPAN13-202ENST00000466195 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
TSPAN13-202ENST00000466195 GPR162Q16538 588 aa16.9■□□□□ 0.3
TSPAN13-202ENST00000466195 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
TSPAN13-202ENST00000466195 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
TSPAN13-202ENST00000466195 YY1P25490 414 aa16.89■□□□□ 0.29
TSPAN13-202ENST00000466195 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.29
TSPAN13-202ENST00000466195 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
TSPAN13-202ENST00000466195 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
TSPAN13-202ENST00000466195 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
TSPAN13-202ENST00000466195 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
TSPAN13-202ENST00000466195 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
TSPAN13-202ENST00000466195 MYH14Q7Z406 1995 aaKnown RBP16.88■□□□□ 0.29
TSPAN13-202ENST00000466195 CCDC87Q9NVE4 849 aa16.88■□□□□ 0.29
TSPAN13-202ENST00000466195 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
TSPAN13-202ENST00000466195 NLGN2Q8NFZ4 835 aa16.87■□□□□ 0.29
TSPAN13-202ENST00000466195 SIPA1L3O60292 1781 aaPredicted RBP16.87■□□□□ 0.29
TSPAN13-202ENST00000466195 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
TSPAN13-202ENST00000466195 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
TSPAN13-202ENST00000466195 MMP10P09238 476 aa16.86■□□□□ 0.29
TSPAN13-202ENST00000466195 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
TSPAN13-202ENST00000466195 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
TSPAN13-202ENST00000466195 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
TSPAN13-202ENST00000466195 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
TSPAN13-202ENST00000466195 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
TSPAN13-202ENST00000466195 STARD3NLO95772 234 aa16.85■□□□□ 0.29
TSPAN13-202ENST00000466195 CYP19A1P11511 503 aaPredicted RBP16.85■□□□□ 0.29
TSPAN13-202ENST00000466195 TEX13AQ9BXU3 409 aaPredicted RBP16.85■□□□□ 0.29
TSPAN13-202ENST00000466195 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
TSPAN13-202ENST00000466195 ZPR1O75312 459 aa16.84■□□□□ 0.29
TSPAN13-202ENST00000466195 GYS1P13807 737 aa16.84■□□□□ 0.29
TSPAN13-202ENST00000466195 MCM10Q7L590 875 aa16.84■□□□□ 0.29
TSPAN13-202ENST00000466195 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
TSPAN13-202ENST00000466195 PARP3Q9Y6F1 533 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms