RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 PIK3C2AO00443 1686 aa7.96□□□□□ -1.13
CHMP3-206ENST00000466032 UBAP1LF5GYI3 381 aa7.96□□□□□ -1.14
CHMP3-206ENST00000466032 FCHSD2O94868 740 aa7.96□□□□□ -1.14
CHMP3-206ENST00000466032 TNNT2P45379 298 aaPredicted RBP7.96□□□□□ -1.14
CHMP3-206ENST00000466032 LMOD2Q6P5Q4 547 aa7.96□□□□□ -1.14
CHMP3-206ENST00000466032 FAM9BQ8IZU0 186 aa7.96□□□□□ -1.14
CHMP3-206ENST00000466032 BCL2L12Q9HB09 334 aa7.96□□□□□ -1.14
CHMP3-206ENST00000466032 CPDO75976 1380 aa7.96□□□□□ -1.14
CHMP3-206ENST00000466032 PLEKHG2Q9H7P9 1386 aa7.96□□□□□ -1.14
CHMP3-206ENST00000466032 ALS2Q96Q42 1657 aa7.95□□□□□ -1.14
CHMP3-206ENST00000466032 BLMP54132 1417 aaPredicted RBP7.95□□□□□ -1.14
CHMP3-206ENST00000466032 SOWAHBA6NEL2 793 aa7.95□□□□□ -1.14
CHMP3-206ENST00000466032 FBXO41Q8TF61 875 aa7.95□□□□□ -1.14
CHMP3-206ENST00000466032 IP6K1Q92551 441 aa7.95□□□□□ -1.14
CHMP3-206ENST00000466032 PHRF1Q9P1Y6 1649 aaKnown RBP7.95□□□□□ -1.14
CHMP3-206ENST00000466032 MAP2P11137 1827 aaKnown RBP7.94□□□□□ -1.14
CHMP3-206ENST00000466032 FAM181BA6NEQ2 426 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 BCAMP50895 628 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 LCE2CQ5TA81 110 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 TRIM67Q6ZTA4 783 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 ARHGEF25Q86VW2 580 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 RUNDC1Q96C34 613 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 ROBO1Q9Y6N7 1651 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 MAP3K19Q56UN5 1328 aa7.94□□□□□ -1.14
CHMP3-206ENST00000466032 PPM1GO15355 546 aaPredicted RBP7.93□□□□□ -1.14
CHMP3-206ENST00000466032 HAP1P54257 671 aaPredicted RBP7.93□□□□□ -1.14
CHMP3-206ENST00000466032 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
CHMP3-206ENST00000466032 PKDCCQ504Y2 493 aa7.93□□□□□ -1.14
CHMP3-206ENST00000466032 WBP1LQ9NX94 342 aa7.93□□□□□ -1.14
CHMP3-206ENST00000466032 EMILIN1Q9Y6C2 1016 aa7.93□□□□□ -1.14
CHMP3-206ENST00000466032 ZBED9Q6R2W3 1325 aa7.93□□□□□ -1.14
CHMP3-206ENST00000466032 NFAT5O94916 1531 aa7.93□□□□□ -1.14
CHMP3-206ENST00000466032 U2AF1L5P0DN76 240 aaPredicted RBP7.92□□□□□ -1.14
CHMP3-206ENST00000466032 HOXC9P31274 260 aa7.92□□□□□ -1.14
CHMP3-206ENST00000466032 IL13P35225 146 aa7.92□□□□□ -1.14
CHMP3-206ENST00000466032 U2AF1Q01081 240 aaKnown RBP eCLIP7.92□□□□□ -1.14
CHMP3-206ENST00000466032 XPCQ01831 940 aaPredicted RBP7.92□□□□□ -1.14
CHMP3-206ENST00000466032 RRS1Q15050 365 aaKnown RBP7.92□□□□□ -1.14
CHMP3-206ENST00000466032 CCDC184Q52MB2 194 aa7.92□□□□□ -1.14
CHMP3-206ENST00000466032 XP32Q5T750 250 aa7.92□□□□□ -1.14
CHMP3-206ENST00000466032 KRTAP1-3Q8IUG1 177 aa7.92□□□□□ -1.14
CHMP3-206ENST00000466032 ADAMTS8Q9UP79 889 aa7.92□□□□□ -1.14
CHMP3-206ENST00000466032 MAPK8IP3Q9UPT6 1336 aa7.92□□□□□ -1.14
CHMP3-206ENST00000466032 COL3A1P02461 1466 aaPredicted RBP7.92□□□□□ -1.14
CHMP3-206ENST00000466032 U2SURPO15042 1029 aaKnown RBP7.91□□□□□ -1.14
CHMP3-206ENST00000466032 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
CHMP3-206ENST00000466032 LMOD3Q0VAK6 560 aa7.91□□□□□ -1.14
CHMP3-206ENST00000466032 CCDC27Q2M243 656 aa7.91□□□□□ -1.14
CHMP3-206ENST00000466032 NUTM2GQ5VZR2 741 aa7.91□□□□□ -1.14
CHMP3-206ENST00000466032 COL22A1Q8NFW1 1626 aaPredicted RBP7.9□□□□□ -1.14
CHMP3-206ENST00000466032 JCADQ9P266 1359 aa7.9□□□□□ -1.14
CHMP3-206ENST00000466032 SPATA31A6Q5VVP1 1343 aa7.9□□□□□ -1.14
CHMP3-206ENST00000466032 CALD1Q05682 793 aaKnown RBP7.9□□□□□ -1.14
CHMP3-206ENST00000466032 EIF4A2Q14240 407 aaKnown RBP7.9□□□□□ -1.14
CHMP3-206ENST00000466032 PPP1R18Q6NYC8 613 aa7.9□□□□□ -1.14
CHMP3-206ENST00000466032 PRDM11Q9NQV5 511 aa7.9□□□□□ -1.14
CHMP3-206ENST00000466032 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
CHMP3-206ENST00000466032 MARF1Q9Y4F3 1742 aaKnown RBP7.89□□□□□ -1.15
CHMP3-206ENST00000466032 KDRP35968 1356 aa7.89□□□□□ -1.15
CHMP3-206ENST00000466032 IGSF1Q8N6C5 1336 aa7.89□□□□□ -1.15
CHMP3-206ENST00000466032 PIP4K2BP78356 416 aa7.89□□□□□ -1.15
CHMP3-206ENST00000466032 HSP90AB2PQ58FF8 381 aa7.89□□□□□ -1.15
CHMP3-206ENST00000466032 DDX17Q92841 729 aaKnown RBP7.89□□□□□ -1.15
CHMP3-206ENST00000466032 HTATSF1O43719 755 aaKnown RBP7.88□□□□□ -1.15
CHMP3-206ENST00000466032 AMOTQ4VCS5 1084 aa7.88□□□□□ -1.15
CHMP3-206ENST00000466032 GAS2L2Q8NHY3 880 aa7.88□□□□□ -1.15
CHMP3-206ENST00000466032 SHPRHQ149N8 1683 aa7.88□□□□□ -1.15
CHMP3-206ENST00000466032 FAM208AQ9UK61 1670 aaKnown RBP7.88□□□□□ -1.15
CHMP3-206ENST00000466032 COL16A1Q07092 1604 aaPredicted RBP7.88□□□□□ -1.15
CHMP3-206ENST00000466032 LTN1O94822 1766 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 CRYBG1Q9Y4K1 1723 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 ZC3H6P61129 1189 aaKnown RBP7.87□□□□□ -1.15
CHMP3-206ENST00000466032 WDR63Q8IWG1 891 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 ANKRD24Q8TF21 1146 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 YTHDC1Q96MU7 727 aaKnown RBP7.87□□□□□ -1.15
CHMP3-206ENST00000466032 PLEKHF1Q96S99 279 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 EYA1Q99502 592 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 RSPH6AQ9H0K4 717 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 BCL11AQ9H165 835 aa7.87□□□□□ -1.15
CHMP3-206ENST00000466032 NCAPD2Q15021 1401 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 KIAA0232Q92628 1395 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 IL16Q14005 1332 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 FBLN1P23142 703 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 PRKAR2BP31323 418 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 SULT6B1Q6IMI4 303 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 TCP11L2Q8N4U5 519 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 CDCA7Q9BWT1 371 aaPredicted RBP7.86□□□□□ -1.15
CHMP3-206ENST00000466032 PEAK1Q9H792 1746 aa7.86□□□□□ -1.15
CHMP3-206ENST00000466032 WDR17Q8IZU2 1322 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 APAF1O14727 1248 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 CSB-PGBD3P0DP91 1061 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 PTPREP23469 700 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
CHMP3-206ENST00000466032 TMPOP42166 694 aaKnown RBP7.85□□□□□ -1.15
CHMP3-206ENST00000466032 EVA1CP58658 441 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 NFE2L2Q16236 605 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 PLEKHO1Q53GL0 409 aaPredicted RBP7.85□□□□□ -1.15
CHMP3-206ENST00000466032 RAPGEF4Q8WZA2 1011 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 CHMP4AQ9BY43 222 aa7.85□□□□□ -1.15
CHMP3-206ENST00000466032 THRAP3Q9Y2W1 955 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms