RNA–Protein interactions for RNA: ENST00000465960.2

CAPN13-205, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 1,215 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-205ENST00000465960 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
CAPN13-205ENST00000465960 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
CAPN13-205ENST00000465960 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
CAPN13-205ENST00000465960 ITPRIPQ8IWB1 547 aa11.87□□□□□ -0.51
CAPN13-205ENST00000465960 TMEM57Q8N5G2 664 aa11.87□□□□□ -0.51
CAPN13-205ENST00000465960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.51
CAPN13-205ENST00000465960 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
CAPN13-205ENST00000465960 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
CAPN13-205ENST00000465960 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
CAPN13-205ENST00000465960 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
CAPN13-205ENST00000465960 IGHDP01880 384 aa11.86□□□□□ -0.51
CAPN13-205ENST00000465960 BAG6P46379 1132 aa11.86□□□□□ -0.51
CAPN13-205ENST00000465960 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
CAPN13-205ENST00000465960 BACH2Q9BYV9 841 aa11.86□□□□□ -0.51
CAPN13-205ENST00000465960 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
CAPN13-205ENST00000465960 LRP5O75197 1615 aa11.86□□□□□ -0.51
CAPN13-205ENST00000465960 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
CAPN13-205ENST00000465960 YY1P25490 414 aa11.85□□□□□ -0.51
CAPN13-205ENST00000465960 TAF7Q15545 349 aaPredicted RBP11.85□□□□□ -0.51
CAPN13-205ENST00000465960 INTS3Q68E01 1043 aaKnown RBP11.85□□□□□ -0.51
CAPN13-205ENST00000465960 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
CAPN13-205ENST00000465960 IL17REQ8NFR9 667 aa11.85□□□□□ -0.51
CAPN13-205ENST00000465960 LTV1Q96GA3 475 aaPredicted RBP11.85□□□□□ -0.51
CAPN13-205ENST00000465960 PDE4AP27815 886 aa11.84□□□□□ -0.51
CAPN13-205ENST00000465960 SMC5Q8IY18 1101 aa11.84□□□□□ -0.51
CAPN13-205ENST00000465960 COL22A1Q8NFW1 1626 aaPredicted RBP11.84□□□□□ -0.51
CAPN13-205ENST00000465960 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
CAPN13-205ENST00000465960 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
CAPN13-205ENST00000465960 FAM161AQ3B820 660 aa11.83□□□□□ -0.52
CAPN13-205ENST00000465960 LMOD2Q6P5Q4 547 aa11.83□□□□□ -0.52
CAPN13-205ENST00000465960 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
CAPN13-205ENST00000465960 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
CAPN13-205ENST00000465960 CCDC30Q5VVM6 783 aa11.82□□□□□ -0.52
CAPN13-205ENST00000465960 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
CAPN13-205ENST00000465960 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
CAPN13-205ENST00000465960 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
CAPN13-205ENST00000465960 MEGF6O75095 1541 aa11.81□□□□□ -0.52
CAPN13-205ENST00000465960 IBTKQ9P2D0 1353 aaPredicted RBP11.81□□□□□ -0.52
CAPN13-205ENST00000465960 HEG1Q9ULI3 1381 aa11.81□□□□□ -0.52
CAPN13-205ENST00000465960 C1orf141Q5JVX7 400 aa11.81□□□□□ -0.52
CAPN13-205ENST00000465960 STK31Q9BXU1 1019 aa11.81□□□□□ -0.52
CAPN13-205ENST00000465960 SCN11AQ9UI33 1791 aa11.81□□□□□ -0.52
CAPN13-205ENST00000465960 COL5A2P05997 1499 aaPredicted RBP11.81□□□□□ -0.52
CAPN13-205ENST00000465960 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
CAPN13-205ENST00000465960 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
CAPN13-205ENST00000465960 ELL2O00472 640 aaPredicted RBP11.8□□□□□ -0.52
CAPN13-205ENST00000465960 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
CAPN13-205ENST00000465960 CCT4P50991 539 aaKnown RBP11.8□□□□□ -0.52
CAPN13-205ENST00000465960 GCC1Q96CN9 775 aa11.8□□□□□ -0.52
CAPN13-205ENST00000465960 A0A0G2JS52 829 aa11.79□□□□□ -0.52
CAPN13-205ENST00000465960 RNMTO43148 476 aaKnown RBP11.79□□□□□ -0.52
CAPN13-205ENST00000465960 MYT1Q01538 1121 aa11.79□□□□□ -0.52
CAPN13-205ENST00000465960 R3HDM1Q15032 1099 aaKnown RBP11.79□□□□□ -0.52
CAPN13-205ENST00000465960 VPS72Q15906 364 aa11.79□□□□□ -0.52
CAPN13-205ENST00000465960 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
CAPN13-205ENST00000465960 RAPGEF4Q8WZA2 1011 aa11.79□□□□□ -0.52
CAPN13-205ENST00000465960 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
CAPN13-205ENST00000465960 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
CAPN13-205ENST00000465960 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
CAPN13-205ENST00000465960 TATP17735 454 aaPredicted RBP11.78□□□□□ -0.52
CAPN13-205ENST00000465960 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
CAPN13-205ENST00000465960 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
CAPN13-205ENST00000465960 ZC3H6P61129 1189 aaKnown RBP11.78□□□□□ -0.52
CAPN13-205ENST00000465960 TEFQ10587 303 aa11.78□□□□□ -0.52
CAPN13-205ENST00000465960 C8orf34Q49A92 452 aa11.78□□□□□ -0.52
CAPN13-205ENST00000465960 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
CAPN13-205ENST00000465960 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.52
CAPN13-205ENST00000465960 ZBTB7CA1YPR0 619 aa11.77□□□□□ -0.53
CAPN13-205ENST00000465960 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
CAPN13-205ENST00000465960 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
CAPN13-205ENST00000465960 RPAP2Q8IXW5 612 aaPredicted RBP11.77□□□□□ -0.53
CAPN13-205ENST00000465960 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
CAPN13-205ENST00000465960 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.53
CAPN13-205ENST00000465960 SLIT2O94813 1529 aa11.76□□□□□ -0.53
CAPN13-205ENST00000465960 NUCB1Q02818 461 aa11.76□□□□□ -0.53
CAPN13-205ENST00000465960 FLIIQ13045 1269 aa11.76□□□□□ -0.53
CAPN13-205ENST00000465960 BTBD11A6QL63 1104 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 PHKG2P15735 406 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 ANKRD44Q8N8A2 993 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 LGR6Q9HBX8 967 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 NLRP2Q9NX02 1062 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 GLI3P10071 1580 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
CAPN13-205ENST00000465960 RGS3P49796 1198 aa11.74□□□□□ -0.53
CAPN13-205ENST00000465960 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
CAPN13-205ENST00000465960 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
CAPN13-205ENST00000465960 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
CAPN13-205ENST00000465960 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
CAPN13-205ENST00000465960 CSB-PGBD3P0DP91 1061 aa11.73□□□□□ -0.53
CAPN13-205ENST00000465960 CARD10Q9BWT7 1032 aa11.73□□□□□ -0.53
CAPN13-205ENST00000465960 SHANK3Q9BYB0 1731 aa11.73□□□□□ -0.53
CAPN13-205ENST00000465960 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
CAPN13-205ENST00000465960 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
CAPN13-205ENST00000465960 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.73□□□□□ -0.53
CAPN13-205ENST00000465960 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
CAPN13-205ENST00000465960 GNAI3P08754 354 aa11.72□□□□□ -0.53
CAPN13-205ENST00000465960 MPRIPQ6WCQ1 1025 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms