RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 ATG3Q9NT62 314 aa20.9■□□□□ 0.94
SCAP-209ENST00000465628 PHF14O94880 888 aa20.89■□□□□ 0.93
SCAP-209ENST00000465628 AKAP4Q5JQC9 854 aa20.89■□□□□ 0.93
SCAP-209ENST00000465628 VIRMAQ69YN4 1812 aaKnown RBP20.89■□□□□ 0.93
SCAP-209ENST00000465628 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
SCAP-209ENST00000465628 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
SCAP-209ENST00000465628 ARXQ96QS3 562 aa20.87■□□□□ 0.93
SCAP-209ENST00000465628 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
SCAP-209ENST00000465628 COL23A1Q86Y22 540 aaPredicted RBP20.86■□□□□ 0.93
SCAP-209ENST00000465628 LINC00116Q8NCU8 138 aa20.86■□□□□ 0.93
SCAP-209ENST00000465628 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
SCAP-209ENST00000465628 UBR3Q6ZT12 1888 aa20.86■□□□□ 0.93
SCAP-209ENST00000465628 GNPATO15228 680 aa20.85■□□□□ 0.93
SCAP-209ENST00000465628 MTHFSDQ2M296 383 aaKnown RBP20.85■□□□□ 0.93
SCAP-209ENST00000465628 NFATC2IPQ8NCF5 419 aa20.85■□□□□ 0.93
SCAP-209ENST00000465628 FHDC1Q9C0D6 1143 aaPredicted RBP20.85■□□□□ 0.93
SCAP-209ENST00000465628 ITPK1Q13572 414 aa20.84■□□□□ 0.93
SCAP-209ENST00000465628 PTCD1O75127 700 aaKnown RBP20.83■□□□□ 0.93
SCAP-209ENST00000465628 U2AF1L5P0DN76 240 aaPredicted RBP20.83■□□□□ 0.93
SCAP-209ENST00000465628 U2AF1Q01081 240 aaKnown RBP eCLIP20.83■□□□□ 0.93
SCAP-209ENST00000465628 GAS2L2Q8NHY3 880 aa20.83■□□□□ 0.93
SCAP-209ENST00000465628 SGIP1Q9BQI5 828 aa20.83■□□□□ 0.93
SCAP-209ENST00000465628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.82■□□□□ 0.92
SCAP-209ENST00000465628 MAP3K5Q99683 1374 aa20.82■□□□□ 0.92
SCAP-209ENST00000465628 MRC1P22897 1456 aa20.81■□□□□ 0.92
SCAP-209ENST00000465628 COL5A3P25940 1745 aaPredicted RBP20.81■□□□□ 0.92
SCAP-209ENST00000465628 ZNF831Q5JPB2 1677 aa20.81■□□□□ 0.92
SCAP-209ENST00000465628 RNMTO43148 476 aaKnown RBP20.81■□□□□ 0.92
SCAP-209ENST00000465628 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
SCAP-209ENST00000465628 SLC52A2Q9HAB3 445 aa20.81■□□□□ 0.92
SCAP-209ENST00000465628 SSFA2P28290 1259 aa20.8■□□□□ 0.92
SCAP-209ENST00000465628 LGR6Q9HBX8 967 aa20.8■□□□□ 0.92
SCAP-209ENST00000465628 COL24A1Q17RW2 1714 aa20.8■□□□□ 0.92
SCAP-209ENST00000465628 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
SCAP-209ENST00000465628 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
SCAP-209ENST00000465628 SYT17Q9BSW7 474 aa20.79■□□□□ 0.92
SCAP-209ENST00000465628 RTCBQ9Y3I0 505 aaKnown RBP20.78■□□□□ 0.92
SCAP-209ENST00000465628 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.92
SCAP-209ENST00000465628 GNAT3A8MTJ3 354 aa20.77■□□□□ 0.92
SCAP-209ENST00000465628 TEFQ10587 303 aa20.77■□□□□ 0.92
SCAP-209ENST00000465628 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
SCAP-209ENST00000465628 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
SCAP-209ENST00000465628 TJP1Q07157 1748 aa20.77■□□□□ 0.92
SCAP-209ENST00000465628 NEFMP07197 916 aa20.76■□□□□ 0.91
SCAP-209ENST00000465628 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
SCAP-209ENST00000465628 CNTNAP4Q9C0A0 1308 aa20.76■□□□□ 0.91
SCAP-209ENST00000465628 SLC39A6Q13433 755 aa20.75■□□□□ 0.91
SCAP-209ENST00000465628 TTC5Q8N0Z6 440 aa20.75■□□□□ 0.91
SCAP-209ENST00000465628 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
SCAP-209ENST00000465628 TRAPPC3LQ5T215 181 aa20.73■□□□□ 0.91
SCAP-209ENST00000465628 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
SCAP-209ENST00000465628 CICQ96RK0 1608 aaPredicted RBP20.73■□□□□ 0.91
SCAP-209ENST00000465628 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
SCAP-209ENST00000465628 RALBP1Q15311 655 aa20.72■□□□□ 0.91
SCAP-209ENST00000465628 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
SCAP-209ENST00000465628 PHACTR3Q96KR7 559 aa20.72■□□□□ 0.91
SCAP-209ENST00000465628 KCPQ6ZWJ8 1503 aa20.72■□□□□ 0.91
SCAP-209ENST00000465628 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
SCAP-209ENST00000465628 FCHSD2O94868 740 aa20.71■□□□□ 0.91
SCAP-209ENST00000465628 ADRA2BP18089 450 aa20.71■□□□□ 0.91
SCAP-209ENST00000465628 RFC4P35249 363 aa20.71■□□□□ 0.91
SCAP-209ENST00000465628 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
SCAP-209ENST00000465628 MYH14Q7Z406 1995 aaKnown RBP20.7■□□□□ 0.9
SCAP-209ENST00000465628 UBR2Q8IWV8 1755 aa20.7■□□□□ 0.9
SCAP-209ENST00000465628 DNAJC10Q8IXB1 793 aa20.7■□□□□ 0.9
SCAP-209ENST00000465628 SIPA1L3O60292 1781 aaPredicted RBP20.69■□□□□ 0.9
SCAP-209ENST00000465628 RPS6KA4O75676 772 aa20.68■□□□□ 0.9
SCAP-209ENST00000465628 GPR162Q16538 588 aa20.68■□□□□ 0.9
SCAP-209ENST00000465628 IL17REQ8NFR9 667 aa20.68■□□□□ 0.9
SCAP-209ENST00000465628 NLGN2Q8NFZ4 835 aa20.68■□□□□ 0.9
SCAP-209ENST00000465628 MAPK8IP3Q9UPT6 1336 aa20.68■□□□□ 0.9
SCAP-209ENST00000465628 CCDC87Q9NVE4 849 aa20.67■□□□□ 0.9
SCAP-209ENST00000465628 YY1P25490 414 aa20.66■□□□□ 0.9
SCAP-209ENST00000465628 ARHGEF1Q92888 912 aaKnown RBP20.66■□□□□ 0.9
SCAP-209ENST00000465628 MYBBP1AQ9BQG0 1328 aaKnown RBP20.66■□□□□ 0.9
SCAP-209ENST00000465628 MMP10P09238 476 aa20.65■□□□□ 0.9
SCAP-209ENST00000465628 MCM10Q7L590 875 aa20.65■□□□□ 0.9
SCAP-209ENST00000465628 CEMIPQ8WUJ3 1361 aa20.64■□□□□ 0.89
SCAP-209ENST00000465628 BTBD11A6QL63 1104 aa20.64■□□□□ 0.89
SCAP-209ENST00000465628 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
SCAP-209ENST00000465628 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.89
SCAP-209ENST00000465628 STARD3NLO95772 234 aa20.63■□□□□ 0.89
SCAP-209ENST00000465628 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
SCAP-209ENST00000465628 CD2APQ9Y5K6 639 aa20.63■□□□□ 0.89
SCAP-209ENST00000465628 DLG5Q8TDM6 1919 aa20.63■□□□□ 0.89
SCAP-209ENST00000465628 CYP19A1P11511 503 aaPredicted RBP20.62■□□□□ 0.89
SCAP-209ENST00000465628 VSIG10Q8N0Z9 540 aa20.62■□□□□ 0.89
SCAP-209ENST00000465628 ZNF496Q96IT1 587 aaPredicted RBP20.62■□□□□ 0.89
SCAP-209ENST00000465628 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
SCAP-209ENST00000465628 HEG1Q9ULI3 1381 aa20.61■□□□□ 0.89
SCAP-209ENST00000465628 ZPR1O75312 459 aa20.61■□□□□ 0.89
SCAP-209ENST00000465628 DCTN1Q14203 1278 aa20.61■□□□□ 0.89
SCAP-209ENST00000465628 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
SCAP-209ENST00000465628 SRP68Q9UHB9 627 aaKnown RBP20.61■□□□□ 0.89
SCAP-209ENST00000465628 ZBTB1Q9Y2K1 713 aa20.61■□□□□ 0.89
SCAP-209ENST00000465628 ZNF330Q9Y3S2 320 aaPredicted RBP20.61■□□□□ 0.89
SCAP-209ENST00000465628 COL15A1P39059 1388 aa20.6■□□□□ 0.89
SCAP-209ENST00000465628 SOS1Q07889 1333 aaPredicted RBP20.6■□□□□ 0.89
SCAP-209ENST00000465628 USP42Q9H9J4 1324 aaKnown RBP20.6■□□□□ 0.89
SCAP-209ENST00000465628 GYS1P13807 737 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms