RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
TMCO3-205ENST00000465556 U2SURPO15042 1029 aaKnown RBP16.18■□□□□ 0.18
TMCO3-205ENST00000465556 PPP2R1AP30153 589 aa16.18■□□□□ 0.18
TMCO3-205ENST00000465556 SIK1P57059 783 aa16.18■□□□□ 0.18
TMCO3-205ENST00000465556 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
TMCO3-205ENST00000465556 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
TMCO3-205ENST00000465556 SGIP1Q9BQI5 828 aa16.17■□□□□ 0.18
TMCO3-205ENST00000465556 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
TMCO3-205ENST00000465556 CABP4P57796 275 aa16.16■□□□□ 0.18
TMCO3-205ENST00000465556 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
TMCO3-205ENST00000465556 SLC16A10Q8TF71 515 aa16.16■□□□□ 0.18
TMCO3-205ENST00000465556 ITPK1Q13572 414 aa16.14■□□□□ 0.17
TMCO3-205ENST00000465556 MTHFSDQ2M296 383 aaKnown RBP16.14■□□□□ 0.17
TMCO3-205ENST00000465556 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
TMCO3-205ENST00000465556 AK7Q96M32 723 aa16.14■□□□□ 0.17
TMCO3-205ENST00000465556 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.17
TMCO3-205ENST00000465556 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
TMCO3-205ENST00000465556 COL23A1Q86Y22 540 aaPredicted RBP16.13■□□□□ 0.17
TMCO3-205ENST00000465556 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
TMCO3-205ENST00000465556 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
TMCO3-205ENST00000465556 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
TMCO3-205ENST00000465556 RNMTO43148 476 aaKnown RBP16.11■□□□□ 0.17
TMCO3-205ENST00000465556 MSH5O43196 834 aa16.11■□□□□ 0.17
TMCO3-205ENST00000465556 NFATC2IPQ8NCF5 419 aa16.11■□□□□ 0.17
TMCO3-205ENST00000465556 FLAD1Q8NFF5 587 aa16.11■□□□□ 0.17
TMCO3-205ENST00000465556 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
TMCO3-205ENST00000465556 SLC52A2Q9HAB3 445 aa16.11■□□□□ 0.17
TMCO3-205ENST00000465556 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
TMCO3-205ENST00000465556 CHD4Q14839 1912 aa16.1■□□□□ 0.17
TMCO3-205ENST00000465556 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
TMCO3-205ENST00000465556 GAS2L2Q8NHY3 880 aa16.1■□□□□ 0.17
TMCO3-205ENST00000465556 ARXQ96QS3 562 aa16.1■□□□□ 0.17
TMCO3-205ENST00000465556 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
TMCO3-205ENST00000465556 FHDC1Q9C0D6 1143 aaPredicted RBP16.1■□□□□ 0.17
TMCO3-205ENST00000465556 LGR6Q9HBX8 967 aa16.1■□□□□ 0.17
TMCO3-205ENST00000465556 GNPATO15228 680 aa16.09■□□□□ 0.17
TMCO3-205ENST00000465556 SSFA2P28290 1259 aa16.09■□□□□ 0.17
TMCO3-205ENST00000465556 POLD1P28340 1107 aa16.09■□□□□ 0.17
TMCO3-205ENST00000465556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.16
TMCO3-205ENST00000465556 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.16
TMCO3-205ENST00000465556 PHF14O94880 888 aa16.08■□□□□ 0.16
TMCO3-205ENST00000465556 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
TMCO3-205ENST00000465556 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
TMCO3-205ENST00000465556 MSL1Q68DK7 614 aa16.08■□□□□ 0.16
TMCO3-205ENST00000465556 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
TMCO3-205ENST00000465556 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
TMCO3-205ENST00000465556 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
TMCO3-205ENST00000465556 KIF13BQ9NQT8 1826 aa16.07■□□□□ 0.16
TMCO3-205ENST00000465556 GNAT3A8MTJ3 354 aa16.06■□□□□ 0.16
TMCO3-205ENST00000465556 PHACTR3Q96KR7 559 aa16.06■□□□□ 0.16
TMCO3-205ENST00000465556 SYT17Q9BSW7 474 aa16.06■□□□□ 0.16
TMCO3-205ENST00000465556 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
TMCO3-205ENST00000465556 FCHSD2O94868 740 aa16.04■□□□□ 0.16
TMCO3-205ENST00000465556 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
TMCO3-205ENST00000465556 RALBP1Q15311 655 aa16.04■□□□□ 0.16
TMCO3-205ENST00000465556 RC3H1Q5TC82 1133 aaKnown RBP16.04■□□□□ 0.16
TMCO3-205ENST00000465556 LAMB4A4D0S4 1761 aa16.04■□□□□ 0.16
TMCO3-205ENST00000465556 KDM3BQ7LBC6 1761 aa16.04■□□□□ 0.16
TMCO3-205ENST00000465556 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
TMCO3-205ENST00000465556 UTRNP46939 3433 aa16.04■□□□□ 0.16
TMCO3-205ENST00000465556 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
TMCO3-205ENST00000465556 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
TMCO3-205ENST00000465556 IL17REQ8NFR9 667 aa16.03■□□□□ 0.16
TMCO3-205ENST00000465556 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
TMCO3-205ENST00000465556 KIAA1551Q9HCM1 1747 aa16.02■□□□□ 0.16
TMCO3-205ENST00000465556 SCN7AQ01118 1682 aa16.02■□□□□ 0.16
TMCO3-205ENST00000465556 CRKLP46109 303 aaKnown RBP16.02■□□□□ 0.16
TMCO3-205ENST00000465556 TEFQ10587 303 aa16.02■□□□□ 0.16
TMCO3-205ENST00000465556 ADRA2BP18089 450 aa16.01■□□□□ 0.15
TMCO3-205ENST00000465556 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
TMCO3-205ENST00000465556 BRCA1P38398 1863 aaKnown RBP16■□□□□ 0.15
TMCO3-205ENST00000465556 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
TMCO3-205ENST00000465556 RPS6KA4O75676 772 aa16■□□□□ 0.15
TMCO3-205ENST00000465556 DNAJC10Q8IXB1 793 aa16■□□□□ 0.15
TMCO3-205ENST00000465556 AFDNP55196 1824 aaKnown RBP15.99■□□□□ 0.15
TMCO3-205ENST00000465556 TTC5Q8N0Z6 440 aa15.99■□□□□ 0.15
TMCO3-205ENST00000465556 BCORQ6W2J9 1755 aa15.99■□□□□ 0.15
TMCO3-205ENST00000465556 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
TMCO3-205ENST00000465556 TRAPPC3LQ5T215 181 aa15.98■□□□□ 0.15
TMCO3-205ENST00000465556 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
TMCO3-205ENST00000465556 NLGN2Q8NFZ4 835 aa15.98■□□□□ 0.15
TMCO3-205ENST00000465556 ARHGEF1Q92888 912 aaKnown RBP15.98■□□□□ 0.15
TMCO3-205ENST00000465556 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
TMCO3-205ENST00000465556 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
TMCO3-205ENST00000465556 INTS5Q6P9B9 1019 aaKnown RBP15.97■□□□□ 0.15
TMCO3-205ENST00000465556 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
TMCO3-205ENST00000465556 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
TMCO3-205ENST00000465556 SOS1Q07889 1333 aaPredicted RBP15.96■□□□□ 0.15
TMCO3-205ENST00000465556 NEFMP07197 916 aa15.96■□□□□ 0.15
TMCO3-205ENST00000465556 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.15
TMCO3-205ENST00000465556 RFC4P35249 363 aa15.96■□□□□ 0.15
TMCO3-205ENST00000465556 MCM10Q7L590 875 aa15.96■□□□□ 0.15
TMCO3-205ENST00000465556 ZNF496Q96IT1 587 aaPredicted RBP15.96■□□□□ 0.15
TMCO3-205ENST00000465556 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
TMCO3-205ENST00000465556 COL15A1P39059 1388 aa15.96■□□□□ 0.15
TMCO3-205ENST00000465556 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
TMCO3-205ENST00000465556 C10orf71Q711Q0 1435 aa15.95■□□□□ 0.14
TMCO3-205ENST00000465556 NRXN2Q9P2S2 1712 aa15.95■□□□□ 0.14
TMCO3-205ENST00000465556 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
TMCO3-205ENST00000465556 MMP10P09238 476 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms