RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 HSPA5P11021 654 aaKnown RBP19.5■□□□□ 0.71
ATG4B-214ENST00000465399 SMIM5Q71RC9 77 aa19.5■□□□□ 0.71
ATG4B-214ENST00000465399 PANK3Q9H999 370 aa19.5■□□□□ 0.71
ATG4B-214ENST00000465399 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
ATG4B-214ENST00000465399 ITPK1Q13572 414 aa19.49■□□□□ 0.71
ATG4B-214ENST00000465399 ATG3Q9NT62 314 aa19.49■□□□□ 0.71
ATG4B-214ENST00000465399 KIF13BQ9NQT8 1826 aa19.47■□□□□ 0.71
ATG4B-214ENST00000465399 ERVV-2B6SEH9 535 aa19.47■□□□□ 0.71
ATG4B-214ENST00000465399 KDRP35968 1356 aa19.46■□□□□ 0.71
ATG4B-214ENST00000465399 PLEKHO1Q53GL0 409 aaPredicted RBP19.46■□□□□ 0.71
ATG4B-214ENST00000465399 DCAF5Q96JK2 942 aa19.46■□□□□ 0.71
ATG4B-214ENST00000465399 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
ATG4B-214ENST00000465399 ATP10DQ9P241 1426 aa19.44■□□□□ 0.7
ATG4B-214ENST00000465399 AMOTQ4VCS5 1084 aa19.44■□□□□ 0.7
ATG4B-214ENST00000465399 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
ATG4B-214ENST00000465399 C4AP0C0L4 1744 aa19.44■□□□□ 0.7
ATG4B-214ENST00000465399 KDM6AO15550 1401 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-214ENST00000465399 N4BP2Q86UW6 1770 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-214ENST00000465399 SCN11AQ9UI33 1791 aa19.43■□□□□ 0.7
ATG4B-214ENST00000465399 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-214ENST00000465399 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
ATG4B-214ENST00000465399 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
ATG4B-214ENST00000465399 CICQ96RK0 1608 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-214ENST00000465399 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
ATG4B-214ENST00000465399 CABP4P57796 275 aa19.42■□□□□ 0.7
ATG4B-214ENST00000465399 C1orf141Q5JVX7 400 aa19.42■□□□□ 0.7
ATG4B-214ENST00000465399 TRAPPC3LQ5T215 181 aa19.42■□□□□ 0.7
ATG4B-214ENST00000465399 CCER1Q8TC90 406 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-214ENST00000465399 MMP10P09238 476 aa19.41■□□□□ 0.7
ATG4B-214ENST00000465399 WWC3Q9ULE0 1092 aa19.41■□□□□ 0.7
ATG4B-214ENST00000465399 KNSTRNQ9Y448 316 aa19.41■□□□□ 0.7
ATG4B-214ENST00000465399 KIAA1551Q9HCM1 1747 aa19.41■□□□□ 0.7
ATG4B-214ENST00000465399 ADRA2BP18089 450 aa19.4■□□□□ 0.7
ATG4B-214ENST00000465399 MTHFSP49914 203 aa19.4■□□□□ 0.7
ATG4B-214ENST00000465399 SLC4A9Q96Q91 983 aa19.4■□□□□ 0.7
ATG4B-214ENST00000465399 GPBP1L1Q9HC44 474 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-214ENST00000465399 CNTNAP4Q9C0A0 1308 aa19.4■□□□□ 0.7
ATG4B-214ENST00000465399 ADCY9O60503 1353 aa19.4■□□□□ 0.7
ATG4B-214ENST00000465399 RC3H1Q5TC82 1133 aaKnown RBP19.39■□□□□ 0.69
ATG4B-214ENST00000465399 AEBP1Q8IUX7 1158 aa19.39■□□□□ 0.69
ATG4B-214ENST00000465399 NLGN1Q8N2Q7 840 aa19.39■□□□□ 0.69
ATG4B-214ENST00000465399 TJP1Q07157 1748 aa19.38■□□□□ 0.69
ATG4B-214ENST00000465399 SULT6B1Q6IMI4 303 aa19.38■□□□□ 0.69
ATG4B-214ENST00000465399 BRCA1P38398 1863 aaKnown RBP19.37■□□□□ 0.69
ATG4B-214ENST00000465399 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
ATG4B-214ENST00000465399 RFC4P35249 363 aa19.37■□□□□ 0.69
ATG4B-214ENST00000465399 ARHGEF1Q92888 912 aaKnown RBP19.37■□□□□ 0.69
ATG4B-214ENST00000465399 RPS6KA4O75676 772 aa19.36■□□□□ 0.69
ATG4B-214ENST00000465399 C10orf71Q711Q0 1435 aa19.35■□□□□ 0.69
ATG4B-214ENST00000465399 PTCD1O75127 700 aaKnown RBP19.35■□□□□ 0.69
ATG4B-214ENST00000465399 TGFB2P61812 414 aa19.35■□□□□ 0.69
ATG4B-214ENST00000465399 NFATC2IPQ8NCF5 419 aa19.35■□□□□ 0.69
ATG4B-214ENST00000465399 ZNF526Q8TF50 670 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-214ENST00000465399 GYS1P13807 737 aa19.34■□□□□ 0.69
ATG4B-214ENST00000465399 CCDC87Q9NVE4 849 aa19.34■□□□□ 0.69
ATG4B-214ENST00000465399 IL13P35225 146 aa19.33■□□□□ 0.68
ATG4B-214ENST00000465399 PARP3Q9Y6F1 533 aa19.33■□□□□ 0.68
ATG4B-214ENST00000465399 ARFGEF1Q9Y6D6 1849 aa19.32■□□□□ 0.68
ATG4B-214ENST00000465399 CRKLP46109 303 aaKnown RBP19.31■□□□□ 0.68
ATG4B-214ENST00000465399 AKAP4Q5JQC9 854 aa19.31■□□□□ 0.68
ATG4B-214ENST00000465399 AMER1Q5JTC6 1135 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-214ENST00000465399 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
ATG4B-214ENST00000465399 A0A0G2JLW4 131 aa19.3■□□□□ 0.68
ATG4B-214ENST00000465399 MRC1P22897 1456 aa19.29■□□□□ 0.68
ATG4B-214ENST00000465399 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
ATG4B-214ENST00000465399 ADAMTS7Q9UKP4 1686 aa19.28■□□□□ 0.68
ATG4B-214ENST00000465399 USP42Q9H9J4 1324 aaKnown RBP19.27■□□□□ 0.68
ATG4B-214ENST00000465399 DPEP1P16444 411 aa19.27■□□□□ 0.68
ATG4B-214ENST00000465399 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.68
ATG4B-214ENST00000465399 HMOX1P09601 288 aa19.26■□□□□ 0.67
ATG4B-214ENST00000465399 SRP68Q9UHB9 627 aaKnown RBP19.26■□□□□ 0.67
ATG4B-214ENST00000465399 CEP350Q5VT06 3117 aa19.26■□□□□ 0.67
ATG4B-214ENST00000465399 UBR2Q8IWV8 1755 aa19.25■□□□□ 0.67
ATG4B-214ENST00000465399 FCHSD2O94868 740 aa19.25■□□□□ 0.67
ATG4B-214ENST00000465399 AFDNP55196 1824 aaKnown RBP19.24■□□□□ 0.67
ATG4B-214ENST00000465399 HSPA6P17066 643 aa19.24■□□□□ 0.67
ATG4B-214ENST00000465399 FKBP8Q14318 412 aa19.24■□□□□ 0.67
ATG4B-214ENST00000465399 ARHGAP27Q6ZUM4 889 aa19.24■□□□□ 0.67
ATG4B-214ENST00000465399 LGR6Q9HBX8 967 aa19.24■□□□□ 0.67
ATG4B-214ENST00000465399 RNMTO43148 476 aaKnown RBP19.23■□□□□ 0.67
ATG4B-214ENST00000465399 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
ATG4B-214ENST00000465399 ZPR1O75312 459 aa19.23■□□□□ 0.67
ATG4B-214ENST00000465399 INTS5Q6P9B9 1019 aaKnown RBP19.23■□□□□ 0.67
ATG4B-214ENST00000465399 DNAJC10Q8IXB1 793 aa19.23■□□□□ 0.67
ATG4B-214ENST00000465399 KCPQ6ZWJ8 1503 aa19.23■□□□□ 0.67
ATG4B-214ENST00000465399 KIF3CO14782 793 aa19.22■□□□□ 0.67
ATG4B-214ENST00000465399 DDR1Q08345 913 aa19.22■□□□□ 0.67
ATG4B-214ENST00000465399 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
ATG4B-214ENST00000465399 PIM2Q9P1W9 311 aa19.22■□□□□ 0.67
ATG4B-214ENST00000465399 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
ATG4B-214ENST00000465399 SOS1Q07889 1333 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-214ENST00000465399 PER1O15534 1290 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-214ENST00000465399 KCNA3P22001 575 aa19.2■□□□□ 0.66
ATG4B-214ENST00000465399 MTHFSDQ2M296 383 aaKnown RBP19.2■□□□□ 0.66
ATG4B-214ENST00000465399 SBF1O95248 1867 aa19.2■□□□□ 0.66
ATG4B-214ENST00000465399 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
ATG4B-214ENST00000465399 POLRMTO00411 1230 aaKnown RBP19.19■□□□□ 0.66
ATG4B-214ENST00000465399 CYP19A1P11511 503 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-214ENST00000465399 DALRD3Q5D0E6 543 aaKnown RBP19.19■□□□□ 0.66
ATG4B-214ENST00000465399 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms