RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
TRA2B-208ENST00000465245 COL5A3P25940 1745 aaPredicted RBP16.77■□□□□ 0.28
TRA2B-208ENST00000465245 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
TRA2B-208ENST00000465245 BCS1LQ9Y276 419 aa16.77■□□□□ 0.28
TRA2B-208ENST00000465245 ZNF831Q5JPB2 1677 aa16.77■□□□□ 0.28
TRA2B-208ENST00000465245 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.27
TRA2B-208ENST00000465245 TOMM70O94826 608 aa16.76■□□□□ 0.27
TRA2B-208ENST00000465245 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
TRA2B-208ENST00000465245 TGFB2P61812 414 aa16.75■□□□□ 0.27
TRA2B-208ENST00000465245 CDCA8Q53HL2 280 aa16.75■□□□□ 0.27
TRA2B-208ENST00000465245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.75■□□□□ 0.273e-8■■□□□ 11.7
TRA2B-208ENST00000465245 A0A0G2JLW4 131 aa16.74■□□□□ 0.27
TRA2B-208ENST00000465245 PHKG2P15735 406 aa16.74■□□□□ 0.27
TRA2B-208ENST00000465245 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
TRA2B-208ENST00000465245 ATG3Q9NT62 314 aa16.74■□□□□ 0.27
TRA2B-208ENST00000465245 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
TRA2B-208ENST00000465245 KDRP35968 1356 aa16.74■□□□□ 0.27
TRA2B-208ENST00000465245 WASHC2AQ641Q2 1341 aa16.73■□□□□ 0.27
TRA2B-208ENST00000465245 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
TRA2B-208ENST00000465245 EYA1Q99502 592 aa16.73■□□□□ 0.27
TRA2B-208ENST00000465245 CARD14Q9BXL6 1004 aa16.73■□□□□ 0.27
TRA2B-208ENST00000465245 TRAPPC3LQ5T215 181 aa16.72■□□□□ 0.27
TRA2B-208ENST00000465245 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
TRA2B-208ENST00000465245 NMRK2Q9NPI5 230 aa16.72■□□□□ 0.27
TRA2B-208ENST00000465245 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
TRA2B-208ENST00000465245 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
TRA2B-208ENST00000465245 FCHSD2O94868 740 aa16.71■□□□□ 0.27
TRA2B-208ENST00000465245 DNAJC5GQ8N7S2 189 aa16.71■□□□□ 0.27
TRA2B-208ENST00000465245 PCNTO95613 3336 aa16.7■□□□□ 0.26
TRA2B-208ENST00000465245 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
TRA2B-208ENST00000465245 DPEP1P16444 411 aa16.7■□□□□ 0.26
TRA2B-208ENST00000465245 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
TRA2B-208ENST00000465245 ADRA2BP18089 450 aa16.69■□□□□ 0.26
TRA2B-208ENST00000465245 C16orf71Q8IYS4 520 aaPredicted RBP16.69■□□□□ 0.26
TRA2B-208ENST00000465245 ARHGEF1Q92888 912 aaKnown RBP16.69■□□□□ 0.26
TRA2B-208ENST00000465245 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
TRA2B-208ENST00000465245 TNRC6CQ9HCJ0 1690 aaKnown RBP16.69■□□□□ 0.26
TRA2B-208ENST00000465245 GYS1P13807 737 aa16.68■□□□□ 0.26
TRA2B-208ENST00000465245 RFC4P35249 363 aa16.68■□□□□ 0.26
TRA2B-208ENST00000465245 SLC4A9Q96Q91 983 aa16.68■□□□□ 0.26
TRA2B-208ENST00000465245 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
TRA2B-208ENST00000465245 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
TRA2B-208ENST00000465245 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
TRA2B-208ENST00000465245 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
TRA2B-208ENST00000465245 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
TRA2B-208ENST00000465245 SBF1O95248 1867 aa16.67■□□□□ 0.26
TRA2B-208ENST00000465245 KCPQ6ZWJ8 1503 aa16.66■□□□□ 0.26
TRA2B-208ENST00000465245 ERVV-2B6SEH9 535 aa16.66■□□□□ 0.26
TRA2B-208ENST00000465245 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
TRA2B-208ENST00000465245 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
TRA2B-208ENST00000465245 HSP90AB1P08238 724 aaKnown RBP16.64■□□□□ 0.25
TRA2B-208ENST00000465245 KCNA3P22001 575 aa16.64■□□□□ 0.25
TRA2B-208ENST00000465245 HTRA3P83110 453 aa16.64■□□□□ 0.25
TRA2B-208ENST00000465245 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
TRA2B-208ENST00000465245 PIM2Q9P1W9 311 aa16.64■□□□□ 0.25
TRA2B-208ENST00000465245 TJP1Q07157 1748 aa16.64■□□□□ 0.25
TRA2B-208ENST00000465245 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
TRA2B-208ENST00000465245 FSTL1Q12841 308 aa16.63■□□□□ 0.25
TRA2B-208ENST00000465245 KLRG1Q96E93 195 aa16.63■□□□□ 0.25
TRA2B-208ENST00000465245 KDM2BQ8NHM5 1336 aa16.63■□□□□ 0.25
TRA2B-208ENST00000465245 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
TRA2B-208ENST00000465245 CABP4P57796 275 aa16.62■□□□□ 0.25
TRA2B-208ENST00000465245 DALRD3Q5D0E6 543 aaKnown RBP16.62■□□□□ 0.25
TRA2B-208ENST00000465245 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
TRA2B-208ENST00000465245 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
TRA2B-208ENST00000465245 SCN11AQ9UI33 1791 aa16.6■□□□□ 0.25
TRA2B-208ENST00000465245 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
TRA2B-208ENST00000465245 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
TRA2B-208ENST00000465245 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
TRA2B-208ENST00000465245 SRP68Q9UHB9 627 aaKnown RBP16.6■□□□□ 0.25
TRA2B-208ENST00000465245 USP42Q9H9J4 1324 aaKnown RBP16.6■□□□□ 0.25
TRA2B-208ENST00000465245 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
TRA2B-208ENST00000465245 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
TRA2B-208ENST00000465245 DDR1Q08345 913 aa16.59■□□□□ 0.25
TRA2B-208ENST00000465245 FKBP8Q14318 412 aa16.59■□□□□ 0.25
TRA2B-208ENST00000465245 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
TRA2B-208ENST00000465245 JMYQ8N9B5 988 aa16.59■□□□□ 0.25
TRA2B-208ENST00000465245 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
TRA2B-208ENST00000465245 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
TRA2B-208ENST00000465245 CHRNA5P30532 468 aa16.58■□□□□ 0.24
TRA2B-208ENST00000465245 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.24
TRA2B-208ENST00000465245 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.24
TRA2B-208ENST00000465245 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
TRA2B-208ENST00000465245 MTHFSP49914 203 aa16.57■□□□□ 0.24
TRA2B-208ENST00000465245 AMOTQ4VCS5 1084 aa16.57■□□□□ 0.24
TRA2B-208ENST00000465245 C1orf141Q5JVX7 400 aa16.57■□□□□ 0.24
TRA2B-208ENST00000465245 POLR3GLQ9BT43 218 aa16.57■□□□□ 0.24
TRA2B-208ENST00000465245 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
TRA2B-208ENST00000465245 CAPN15O75808 1086 aa16.55■□□□□ 0.24
TRA2B-208ENST00000465245 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
TRA2B-208ENST00000465245 SMC1BQ8NDV3 1235 aa16.55■□□□□ 0.24
TRA2B-208ENST00000465245 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
TRA2B-208ENST00000465245 RASSF7Q02833 373 aa16.54■□□□□ 0.24
TRA2B-208ENST00000465245 TNS4Q8IZW8 715 aa16.54■□□□□ 0.24
TRA2B-208ENST00000465245 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
TRA2B-208ENST00000465245 ZPR1O75312 459 aa16.53■□□□□ 0.24
TRA2B-208ENST00000465245 AEBP1Q8IUX7 1158 aa16.53■□□□□ 0.24
TRA2B-208ENST00000465245 TM4SF1P30408 202 aa16.52■□□□□ 0.24
TRA2B-208ENST00000465245 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
TRA2B-208ENST00000465245 INTS5Q6P9B9 1019 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms