RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
ATF3-208ENST00000465155 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
ATF3-208ENST00000465155 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
ATF3-208ENST00000465155 RGS17Q9UGC6 210 aaPredicted RBP17.43■□□□□ 0.38
ATF3-208ENST00000465155 ZNF853P0CG23 659 aa17.43■□□□□ 0.38
ATF3-208ENST00000465155 SEPT12Q8IYM1 358 aa17.43■□□□□ 0.38
ATF3-208ENST00000465155 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
ATF3-208ENST00000465155 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
ATF3-208ENST00000465155 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
ATF3-208ENST00000465155 MRC1P22897 1456 aa17.42■□□□□ 0.38
ATF3-208ENST00000465155 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
ATF3-208ENST00000465155 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
ATF3-208ENST00000465155 MIS18AQ9NYP9 233 aa17.41■□□□□ 0.38
ATF3-208ENST00000465155 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
ATF3-208ENST00000465155 BRWD3Q6RI45 1802 aa17.41■□□□□ 0.38
ATF3-208ENST00000465155 ITGB4P16144 1822 aa17.4■□□□□ 0.38
ATF3-208ENST00000465155 CHL1O00533 1208 aa17.4■□□□□ 0.38
ATF3-208ENST00000465155 RXRBP28702 533 aa17.4■□□□□ 0.38
ATF3-208ENST00000465155 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
ATF3-208ENST00000465155 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.38
ATF3-208ENST00000465155 CABP4P57796 275 aa17.39■□□□□ 0.38
ATF3-208ENST00000465155 POTEAQ6S8J7 498 aa17.39■□□□□ 0.38
ATF3-208ENST00000465155 NFATC2IPQ8NCF5 419 aa17.39■□□□□ 0.38
ATF3-208ENST00000465155 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.38
ATF3-208ENST00000465155 KAT6BQ8WYB5 2073 aa17.39■□□□□ 0.38
ATF3-208ENST00000465155 BTBD11A6QL63 1104 aa17.39■□□□□ 0.37
ATF3-208ENST00000465155 BABAM1Q9NWV8 329 aa17.38■□□□□ 0.37
ATF3-208ENST00000465155 EXOSC9Q06265 439 aaKnown RBP17.36■□□□□ 0.37
ATF3-208ENST00000465155 TMOD3Q9NYL9 352 aa17.36■□□□□ 0.37
ATF3-208ENST00000465155 FAM182BQ5T319 152 aa17.35■□□□□ 0.37
ATF3-208ENST00000465155 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
ATF3-208ENST00000465155 RGS12O14924 1447 aa17.34■□□□□ 0.37
ATF3-208ENST00000465155 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
ATF3-208ENST00000465155 ACSBG1Q96GR2 724 aa17.34■□□□□ 0.37
ATF3-208ENST00000465155 PAPPAQ13219 1627 aa17.34■□□□□ 0.37
ATF3-208ENST00000465155 KCNQ3O43525 872 aa17.33■□□□□ 0.37
ATF3-208ENST00000465155 SLC39A6Q13433 755 aa17.33■□□□□ 0.37
ATF3-208ENST00000465155 KRT27Q7Z3Y8 459 aa17.33■□□□□ 0.37
ATF3-208ENST00000465155 BCL9O00512 1426 aa17.33■□□□□ 0.36
ATF3-208ENST00000465155 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
ATF3-208ENST00000465155 PIGBQ92521 554 aa17.32■□□□□ 0.36
ATF3-208ENST00000465155 SBF2Q86WG5 1849 aa17.32■□□□□ 0.36
ATF3-208ENST00000465155 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
ATF3-208ENST00000465155 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
ATF3-208ENST00000465155 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
ATF3-208ENST00000465155 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
ATF3-208ENST00000465155 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
ATF3-208ENST00000465155 UBR2Q8IWV8 1755 aa17.31■□□□□ 0.36
ATF3-208ENST00000465155 NHSQ6T4R5 1651 aa17.3■□□□□ 0.36
ATF3-208ENST00000465155 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
ATF3-208ENST00000465155 TWISTNBQ3B726 338 aaPredicted RBP17.3■□□□□ 0.36
ATF3-208ENST00000465155 KCNQ2O43526 872 aa17.29■□□□□ 0.36
ATF3-208ENST00000465155 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
ATF3-208ENST00000465155 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
ATF3-208ENST00000465155 ASAP1Q9ULH1 1129 aa17.28■□□□□ 0.36
ATF3-208ENST00000465155 VAMP4O75379 141 aa17.27■□□□□ 0.36
ATF3-208ENST00000465155 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.36
ATF3-208ENST00000465155 ATG3Q9NT62 314 aa17.27■□□□□ 0.36
ATF3-208ENST00000465155 BTAF1O14981 1849 aa17.27■□□□□ 0.35
ATF3-208ENST00000465155 C5P01031 1676 aa17.27■□□□□ 0.35
ATF3-208ENST00000465155 KCPQ6ZWJ8 1503 aa17.27■□□□□ 0.35
ATF3-208ENST00000465155 ZNF496Q96IT1 587 aaPredicted RBP17.26■□□□□ 0.35
ATF3-208ENST00000465155 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
ATF3-208ENST00000465155 HEG1Q9ULI3 1381 aa17.25■□□□□ 0.35
ATF3-208ENST00000465155 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
ATF3-208ENST00000465155 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
ATF3-208ENST00000465155 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
ATF3-208ENST00000465155 GIGYF1O75420 1035 aaPredicted RBP17.24■□□□□ 0.35
ATF3-208ENST00000465155 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
ATF3-208ENST00000465155 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
ATF3-208ENST00000465155 SOS1Q07889 1333 aaPredicted RBP17.24■□□□□ 0.35
ATF3-208ENST00000465155 EP400Q96L91 3159 aa17.24■□□□□ 0.35
ATF3-208ENST00000465155 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
ATF3-208ENST00000465155 HOXB7P09629 217 aa17.23■□□□□ 0.35
ATF3-208ENST00000465155 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
ATF3-208ENST00000465155 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
ATF3-208ENST00000465155 BCAR3O75815 825 aa17.22■□□□□ 0.35
ATF3-208ENST00000465155 SNRPA1P09661 255 aaKnown RBP17.22■□□□□ 0.35
ATF3-208ENST00000465155 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
ATF3-208ENST00000465155 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
ATF3-208ENST00000465155 ALDH1L2Q3SY69 923 aa17.21■□□□□ 0.35
ATF3-208ENST00000465155 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
ATF3-208ENST00000465155 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
ATF3-208ENST00000465155 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
ATF3-208ENST00000465155 TRIM37O94972 964 aa17.21■□□□□ 0.35
ATF3-208ENST00000465155 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
ATF3-208ENST00000465155 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
ATF3-208ENST00000465155 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
ATF3-208ENST00000465155 BCL11BQ9C0K0 894 aaPredicted RBP17.21■□□□□ 0.35
ATF3-208ENST00000465155 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
ATF3-208ENST00000465155 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
ATF3-208ENST00000465155 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
ATF3-208ENST00000465155 TJP1Q07157 1748 aa17.18■□□□□ 0.34
ATF3-208ENST00000465155 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
ATF3-208ENST00000465155 CACNA1FO60840 1977 aa17.18■□□□□ 0.34
ATF3-208ENST00000465155 LY75O60449 1722 aa17.18■□□□□ 0.34
ATF3-208ENST00000465155 SLC4A9Q96Q91 983 aa17.18■□□□□ 0.34
ATF3-208ENST00000465155 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
ATF3-208ENST00000465155 CHMP4AQ9BY43 222 aa17.18■□□□□ 0.34
ATF3-208ENST00000465155 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms