RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 SMARCC1Q92922 1105 aaPredicted RBP16.46■□□□□ 0.23
SCAF8-205ENST00000464628 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
SCAF8-205ENST00000464628 GNPATO15228 680 aa16.45■□□□□ 0.22
SCAF8-205ENST00000464628 HOXC9P31274 260 aa16.45■□□□□ 0.22
SCAF8-205ENST00000464628 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
SCAF8-205ENST00000464628 PCDH11XQ9BZA7 1347 aa16.45■□□□□ 0.22
SCAF8-205ENST00000464628 PCDH11YQ9BZA8 1340 aa16.45■□□□□ 0.22
SCAF8-205ENST00000464628 ITPK1Q13572 414 aa16.44■□□□□ 0.22
SCAF8-205ENST00000464628 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
SCAF8-205ENST00000464628 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
SCAF8-205ENST00000464628 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
SCAF8-205ENST00000464628 CNTNAP1P78357 1384 aa16.43■□□□□ 0.22
SCAF8-205ENST00000464628 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
SCAF8-205ENST00000464628 CTCFP49711 727 aaPredicted RBP16.43■□□□□ 0.22
SCAF8-205ENST00000464628 RGS19P49795 217 aa16.43■□□□□ 0.22
SCAF8-205ENST00000464628 MLLT1Q03111 559 aaPredicted RBP16.43■□□□□ 0.22
SCAF8-205ENST00000464628 LOC102724428A0A0B4J2F2 783 aa16.42■□□□□ 0.22
SCAF8-205ENST00000464628 GLTPD2A6NH11 291 aa16.42■□□□□ 0.22
SCAF8-205ENST00000464628 SIK1P57059 783 aa16.42■□□□□ 0.22
SCAF8-205ENST00000464628 NBPF6Q5VWK0 638 aa16.42■□□□□ 0.22
SCAF8-205ENST00000464628 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
SCAF8-205ENST00000464628 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
SCAF8-205ENST00000464628 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
SCAF8-205ENST00000464628 DICER1Q9UPY3 1922 aaKnown RBP16.42■□□□□ 0.22
SCAF8-205ENST00000464628 POTECB2RU33 542 aa16.41■□□□□ 0.22
SCAF8-205ENST00000464628 CYP27B1O15528 508 aa16.41■□□□□ 0.22
SCAF8-205ENST00000464628 RASSF7Q02833 373 aa16.41■□□□□ 0.22
SCAF8-205ENST00000464628 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
SCAF8-205ENST00000464628 PIGBQ92521 554 aa16.41■□□□□ 0.22
SCAF8-205ENST00000464628 A0A1W2PP64 1363 aa16.4■□□□□ 0.22
SCAF8-205ENST00000464628 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
SCAF8-205ENST00000464628 NLGN1Q8N2Q7 840 aa16.4■□□□□ 0.22
SCAF8-205ENST00000464628 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
SCAF8-205ENST00000464628 KDRP35968 1356 aa16.39■□□□□ 0.21
SCAF8-205ENST00000464628 THSD7BQ9C0I4 1608 aa16.39■□□□□ 0.21
SCAF8-205ENST00000464628 GYS1P13807 737 aa16.39■□□□□ 0.21
SCAF8-205ENST00000464628 LBX1P52954 281 aa16.39■□□□□ 0.21
SCAF8-205ENST00000464628 TMF1P82094 1093 aa16.39■□□□□ 0.21
SCAF8-205ENST00000464628 ADAMTS7Q9UKP4 1686 aa16.38■□□□□ 0.21
SCAF8-205ENST00000464628 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
SCAF8-205ENST00000464628 FBLN1P23142 703 aa16.37■□□□□ 0.21
SCAF8-205ENST00000464628 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
SCAF8-205ENST00000464628 AFDNP55196 1824 aaKnown RBP16.37■□□□□ 0.21
SCAF8-205ENST00000464628 HSPA8P11142 646 aaKnown RBP16.36■□□□□ 0.21
SCAF8-205ENST00000464628 AIDAQ96BJ3 306 aa16.36■□□□□ 0.21
SCAF8-205ENST00000464628 WBP1LQ9NX94 342 aa16.36■□□□□ 0.21
SCAF8-205ENST00000464628 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
SCAF8-205ENST00000464628 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
SCAF8-205ENST00000464628 CHRNA5P30532 468 aa16.35■□□□□ 0.21
SCAF8-205ENST00000464628 ATP6V1AP38606 617 aa16.35■□□□□ 0.21
SCAF8-205ENST00000464628 AMPHP49418 695 aa16.35■□□□□ 0.21
SCAF8-205ENST00000464628 LMNB1P20700 586 aa16.34■□□□□ 0.21
SCAF8-205ENST00000464628 TRAPPC3LQ5T215 181 aa16.34■□□□□ 0.21
SCAF8-205ENST00000464628 ARHGEF1Q92888 912 aaKnown RBP16.34■□□□□ 0.21
SCAF8-205ENST00000464628 VEGFBP49765 207 aa16.33■□□□□ 0.2
SCAF8-205ENST00000464628 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
SCAF8-205ENST00000464628 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
SCAF8-205ENST00000464628 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
SCAF8-205ENST00000464628 RTCBQ9Y3I0 505 aaKnown RBP16.33■□□□□ 0.2
SCAF8-205ENST00000464628 NCAPD2Q15021 1401 aa16.33■□□□□ 0.2
SCAF8-205ENST00000464628 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
SCAF8-205ENST00000464628 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
SCAF8-205ENST00000464628 POTEJP0CG39 1038 aa16.32■□□□□ 0.2
SCAF8-205ENST00000464628 DDR1Q08345 913 aa16.32■□□□□ 0.2
SCAF8-205ENST00000464628 FER1L6Q2WGJ9 1857 aa16.32■□□□□ 0.2
SCAF8-205ENST00000464628 CHADLQ6NUI6 762 aa16.32■□□□□ 0.2
SCAF8-205ENST00000464628 PASKQ96RG2 1323 aa16.32■□□□□ 0.2
SCAF8-205ENST00000464628 SLC12A5Q9H2X9 1139 aa16.32■□□□□ 0.2
SCAF8-205ENST00000464628 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
SCAF8-205ENST00000464628 CCDC85CA6NKD9 419 aa16.31■□□□□ 0.2
SCAF8-205ENST00000464628 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
SCAF8-205ENST00000464628 TJP1Q07157 1748 aa16.3■□□□□ 0.2
SCAF8-205ENST00000464628 SCN4AP35499 1836 aa16.29■□□□□ 0.2
SCAF8-205ENST00000464628 CNTNAP4Q9C0A0 1308 aa16.29■□□□□ 0.2
SCAF8-205ENST00000464628 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
SCAF8-205ENST00000464628 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
SCAF8-205ENST00000464628 NFKBIEO00221 500 aa16.28■□□□□ 0.2
SCAF8-205ENST00000464628 RRS1Q15050 365 aaKnown RBP16.28■□□□□ 0.2
SCAF8-205ENST00000464628 TMC1Q8TDI8 760 aa16.28■□□□□ 0.2
SCAF8-205ENST00000464628 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
SCAF8-205ENST00000464628 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
SCAF8-205ENST00000464628 ROCK2O75116 1388 aaKnown RBP16.27■□□□□ 0.2
SCAF8-205ENST00000464628 INSRP06213 1382 aa16.27■□□□□ 0.2
SCAF8-205ENST00000464628 RFC4P35249 363 aa16.27■□□□□ 0.2
SCAF8-205ENST00000464628 RC3H1Q5TC82 1133 aaKnown RBP16.27■□□□□ 0.2
SCAF8-205ENST00000464628 COG3Q96JB2 828 aa16.27■□□□□ 0.2
SCAF8-205ENST00000464628 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
SCAF8-205ENST00000464628 RPS6KA4O75676 772 aa16.26■□□□□ 0.19
SCAF8-205ENST00000464628 FKBP8Q14318 412 aa16.26■□□□□ 0.19
SCAF8-205ENST00000464628 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
SCAF8-205ENST00000464628 TERF2IPQ9NYB0 399 aa16.25■□□□□ 0.19
SCAF8-205ENST00000464628 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
SCAF8-205ENST00000464628 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
SCAF8-205ENST00000464628 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
SCAF8-205ENST00000464628 SRP68Q9UHB9 627 aaKnown RBP16.24■□□□□ 0.19
SCAF8-205ENST00000464628 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
SCAF8-205ENST00000464628 TMEM88BA6NKF7 163 aa16.23■□□□□ 0.19
SCAF8-205ENST00000464628 HSP90AB2PQ58FF8 381 aa16.23■□□□□ 0.19
SCAF8-205ENST00000464628 PDE4DIPQ5VU43 2346 aa16.23■□□□□ 0.19
SCAF8-205ENST00000464628 CACNA1SQ13698 1873 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms