RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
PTPN18-209ENST00000464576 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
PTPN18-209ENST00000464576 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
PTPN18-209ENST00000464576 CABP4P57796 275 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 AMOTQ4VCS5 1084 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 ATG3Q9NT62 314 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 WWC3Q9ULE0 1092 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
PTPN18-209ENST00000464576 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
PTPN18-209ENST00000464576 ZNF530Q6P9A1 599 aaPredicted RBP12.89□□□□□ -0.35
PTPN18-209ENST00000464576 SMIM5Q71RC9 77 aa12.89□□□□□ -0.35
PTPN18-209ENST00000464576 GPBP1L1Q9HC44 474 aaPredicted RBP12.89□□□□□ -0.35
PTPN18-209ENST00000464576 MTHFSP49914 203 aa12.88□□□□□ -0.35
PTPN18-209ENST00000464576 ITPK1Q13572 414 aa12.88□□□□□ -0.35
PTPN18-209ENST00000464576 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
PTPN18-209ENST00000464576 MMP10P09238 476 aa12.87□□□□□ -0.35
PTPN18-209ENST00000464576 RFC4P35249 363 aa12.87□□□□□ -0.35
PTPN18-209ENST00000464576 NLGN1Q8N2Q7 840 aa12.87□□□□□ -0.35
PTPN18-209ENST00000464576 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
PTPN18-209ENST00000464576 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
PTPN18-209ENST00000464576 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
PTPN18-209ENST00000464576 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
PTPN18-209ENST00000464576 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
PTPN18-209ENST00000464576 ADRA2BP18089 450 aa12.85□□□□□ -0.35
PTPN18-209ENST00000464576 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
PTPN18-209ENST00000464576 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
PTPN18-209ENST00000464576 SULT6B1Q6IMI4 303 aa12.84□□□□□ -0.35
PTPN18-209ENST00000464576 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
PTPN18-209ENST00000464576 TGFB2P61812 414 aa12.83□□□□□ -0.36
PTPN18-209ENST00000464576 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
PTPN18-209ENST00000464576 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
PTPN18-209ENST00000464576 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
PTPN18-209ENST00000464576 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
PTPN18-209ENST00000464576 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
PTPN18-209ENST00000464576 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
PTPN18-209ENST00000464576 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
PTPN18-209ENST00000464576 A0A0G2JLW4 131 aa12.81□□□□□ -0.36
PTPN18-209ENST00000464576 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
PTPN18-209ENST00000464576 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
PTPN18-209ENST00000464576 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
PTPN18-209ENST00000464576 COL5A3P25940 1745 aaPredicted RBP12.8□□□□□ -0.36
PTPN18-209ENST00000464576 FCHSD2O94868 740 aa12.8□□□□□ -0.36
PTPN18-209ENST00000464576 KDRP35968 1356 aa12.8□□□□□ -0.36
PTPN18-209ENST00000464576 ZPR1O75312 459 aa12.79□□□□□ -0.36
PTPN18-209ENST00000464576 GYS1P13807 737 aa12.79□□□□□ -0.36
PTPN18-209ENST00000464576 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
PTPN18-209ENST00000464576 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
PTPN18-209ENST00000464576 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
PTPN18-209ENST00000464576 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
PTPN18-209ENST00000464576 KIF13BQ9NQT8 1826 aa12.78□□□□□ -0.36
PTPN18-209ENST00000464576 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
PTPN18-209ENST00000464576 C4AP0C0L4 1744 aa12.77□□□□□ -0.36
PTPN18-209ENST00000464576 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.36
PTPN18-209ENST00000464576 HMOX1P09601 288 aa12.77□□□□□ -0.37
PTPN18-209ENST00000464576 DPEP1P16444 411 aa12.77□□□□□ -0.37
PTPN18-209ENST00000464576 IL13P35225 146 aa12.77□□□□□ -0.37
PTPN18-209ENST00000464576 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
PTPN18-209ENST00000464576 PXDNLA1KZ92 1463 aa12.77□□□□□ -0.37
PTPN18-209ENST00000464576 HSPA6P17066 643 aa12.76□□□□□ -0.37
PTPN18-209ENST00000464576 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
PTPN18-209ENST00000464576 SLC52A2Q9HAB3 445 aa12.76□□□□□ -0.37
PTPN18-209ENST00000464576 ADCY9O60503 1353 aa12.76□□□□□ -0.37
PTPN18-209ENST00000464576 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
PTPN18-209ENST00000464576 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
PTPN18-209ENST00000464576 CC2D1BQ5T0F9 858 aaKnown RBP12.75□□□□□ -0.37
PTPN18-209ENST00000464576 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
PTPN18-209ENST00000464576 C16orf71Q8IYS4 520 aaPredicted RBP12.75□□□□□ -0.37
PTPN18-209ENST00000464576 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
PTPN18-209ENST00000464576 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
PTPN18-209ENST00000464576 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
PTPN18-209ENST00000464576 FKBP8Q14318 412 aa12.74□□□□□ -0.37
PTPN18-209ENST00000464576 AMER1Q5JTC6 1135 aaPredicted RBP12.74□□□□□ -0.37
PTPN18-209ENST00000464576 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
PTPN18-209ENST00000464576 TTC5Q8N0Z6 440 aa12.74□□□□□ -0.37
PTPN18-209ENST00000464576 KIF7Q2M1P5 1343 aa12.73□□□□□ -0.37
PTPN18-209ENST00000464576 U2SURPO15042 1029 aaKnown RBP12.73□□□□□ -0.37
PTPN18-209ENST00000464576 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
PTPN18-209ENST00000464576 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
PTPN18-209ENST00000464576 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
PTPN18-209ENST00000464576 STARD3NLO95772 234 aa12.72□□□□□ -0.37
PTPN18-209ENST00000464576 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
PTPN18-209ENST00000464576 USPL1Q5W0Q7 1092 aa12.72□□□□□ -0.37
PTPN18-209ENST00000464576 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
PTPN18-209ENST00000464576 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
PTPN18-209ENST00000464576 TJP1Q07157 1748 aa12.71□□□□□ -0.37
PTPN18-209ENST00000464576 TOMM70O94826 608 aa12.71□□□□□ -0.37
PTPN18-209ENST00000464576 TEFQ10587 303 aa12.71□□□□□ -0.37
PTPN18-209ENST00000464576 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
PTPN18-209ENST00000464576 BRCA1P38398 1863 aaKnown RBP12.71□□□□□ -0.37
PTPN18-209ENST00000464576 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.38
PTPN18-209ENST00000464576 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
PTPN18-209ENST00000464576 KIF3CO14782 793 aa12.7□□□□□ -0.38
PTPN18-209ENST00000464576 CYP19A1P11511 503 aaPredicted RBP12.7□□□□□ -0.38
PTPN18-209ENST00000464576 APLP1P51693 650 aa12.7□□□□□ -0.38
PTPN18-209ENST00000464576 DDR1Q08345 913 aa12.7□□□□□ -0.38
PTPN18-209ENST00000464576 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms