RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 F6X3S4 739 aa12.36□□□□□ -0.43
ATF3-207ENST00000464547 KCNQ3O43525 872 aa12.36□□□□□ -0.43
ATF3-207ENST00000464547 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
ATF3-207ENST00000464547 CHD1LQ86WJ1 897 aa12.36□□□□□ -0.43
ATF3-207ENST00000464547 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
ATF3-207ENST00000464547 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
ATF3-207ENST00000464547 ABCC6O95255 1503 aa12.36□□□□□ -0.43
ATF3-207ENST00000464547 SEC24BO95487 1268 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 TEFQ10587 303 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 FLIIQ13045 1269 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 ANKRD44Q8N8A2 993 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 MEIS3Q99687 375 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
ATF3-207ENST00000464547 CPDO75976 1380 aa12.34□□□□□ -0.43
ATF3-207ENST00000464547 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
ATF3-207ENST00000464547 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
ATF3-207ENST00000464547 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
ATF3-207ENST00000464547 ANKRD45Q5TZF3 282 aa12.34□□□□□ -0.43
ATF3-207ENST00000464547 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
ATF3-207ENST00000464547 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
ATF3-207ENST00000464547 SOS2Q07890 1332 aaPredicted RBP12.34□□□□□ -0.43
ATF3-207ENST00000464547 HOXB7P09629 217 aa12.33□□□□□ -0.44
ATF3-207ENST00000464547 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
ATF3-207ENST00000464547 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
ATF3-207ENST00000464547 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
ATF3-207ENST00000464547 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
ATF3-207ENST00000464547 RAPGEF4Q8WZA2 1011 aa12.33□□□□□ -0.44
ATF3-207ENST00000464547 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
ATF3-207ENST00000464547 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
ATF3-207ENST00000464547 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
ATF3-207ENST00000464547 MEGF6O75095 1541 aa12.32□□□□□ -0.44
ATF3-207ENST00000464547 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
ATF3-207ENST00000464547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
ATF3-207ENST00000464547 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
ATF3-207ENST00000464547 PHKG2P15735 406 aa12.3□□□□□ -0.44
ATF3-207ENST00000464547 CHMP4AQ9BY43 222 aa12.3□□□□□ -0.44
ATF3-207ENST00000464547 PHAXQ9H814 394 aaKnown RBP12.3□□□□□ -0.44
ATF3-207ENST00000464547 SIPA1L3O60292 1781 aaPredicted RBP12.3□□□□□ -0.44
ATF3-207ENST00000464547 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
ATF3-207ENST00000464547 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
ATF3-207ENST00000464547 KDM6AO15550 1401 aaPredicted RBP12.29□□□□□ -0.44
ATF3-207ENST00000464547 PXDNLA1KZ92 1463 aa12.29□□□□□ -0.44
ATF3-207ENST00000464547 CHPF2Q9P2E5 772 aa12.29□□□□□ -0.44
ATF3-207ENST00000464547 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
ATF3-207ENST00000464547 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
ATF3-207ENST00000464547 GNAI2P04899 355 aa12.28□□□□□ -0.44
ATF3-207ENST00000464547 GNAI3P08754 354 aa12.28□□□□□ -0.44
ATF3-207ENST00000464547 IFNL2Q8IZJ0 200 aa12.28□□□□□ -0.44
ATF3-207ENST00000464547 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
ATF3-207ENST00000464547 HMMRO75330 724 aa12.27□□□□□ -0.45
ATF3-207ENST00000464547 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
ATF3-207ENST00000464547 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
ATF3-207ENST00000464547 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
ATF3-207ENST00000464547 PKD1L3Q7Z443 1732 aa12.26□□□□□ -0.45
ATF3-207ENST00000464547 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
ATF3-207ENST00000464547 CYP27B1O15528 508 aa12.26□□□□□ -0.45
ATF3-207ENST00000464547 PLEKHM2Q8IWE5 1019 aa12.26□□□□□ -0.45
ATF3-207ENST00000464547 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
ATF3-207ENST00000464547 UPF2Q9HAU5 1272 aaKnown RBP12.26□□□□□ -0.45
ATF3-207ENST00000464547 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
ATF3-207ENST00000464547 PRAMEF22A3QJZ6 481 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 ANXA1P04083 346 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 ATP8B2P98198 1209 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 C16orf71Q8IYS4 520 aaPredicted RBP12.25□□□□□ -0.45
ATF3-207ENST00000464547 DNAAF4Q8WXU2 420 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 USP44Q9H0E7 712 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
ATF3-207ENST00000464547 WDR17Q8IZU2 1322 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 ABCA3Q99758 1704 aa12.25□□□□□ -0.45
ATF3-207ENST00000464547 SMARCA5O60264 1052 aaPredicted RBP12.24□□□□□ -0.45
ATF3-207ENST00000464547 ADCY9O60503 1353 aa12.24□□□□□ -0.45
ATF3-207ENST00000464547 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
ATF3-207ENST00000464547 MRC1P22897 1456 aa12.24□□□□□ -0.45
ATF3-207ENST00000464547 SLC39A6Q13433 755 aa12.24□□□□□ -0.45
ATF3-207ENST00000464547 PROSER3Q2NL68 480 aa12.24□□□□□ -0.45
ATF3-207ENST00000464547 BEND3Q5T5X7 828 aa12.24□□□□□ -0.45
ATF3-207ENST00000464547 ZNF790Q6PG37 636 aa12.24□□□□□ -0.45
ATF3-207ENST00000464547 DCAF5Q96JK2 942 aa12.24□□□□□ -0.45
ATF3-207ENST00000464547 LRRFIP2Q9Y608 721 aaKnown RBP12.24□□□□□ -0.45
ATF3-207ENST00000464547 COL5A2P05997 1499 aaPredicted RBP12.23□□□□□ -0.45
ATF3-207ENST00000464547 PI4KAP2A4QPH2 592 aa12.23□□□□□ -0.45
ATF3-207ENST00000464547 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
ATF3-207ENST00000464547 MFAP1P55081 439 aaKnown RBP12.23□□□□□ -0.45
ATF3-207ENST00000464547 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
ATF3-207ENST00000464547 PI4KAP1Q8N8J0 262 aa12.23□□□□□ -0.45
ATF3-207ENST00000464547 NFATC2IPQ8NCF5 419 aa12.23□□□□□ -0.45
ATF3-207ENST00000464547 OTUD7AQ8TE49 926 aaPredicted RBP12.23□□□□□ -0.45
ATF3-207ENST00000464547 PNMA6EA0A0J9YXQ4 647 aa12.22□□□□□ -0.45
ATF3-207ENST00000464547 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
ATF3-207ENST00000464547 CARD10Q9BWT7 1032 aa12.22□□□□□ -0.45
ATF3-207ENST00000464547 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
ATF3-207ENST00000464547 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
ATF3-207ENST00000464547 APBB1O00213 710 aa12.21□□□□□ -0.45
ATF3-207ENST00000464547 GSPT1P15170 499 aaKnown RBP12.21□□□□□ -0.45
ATF3-207ENST00000464547 CABP4P57796 275 aa12.21□□□□□ -0.45
ATF3-207ENST00000464547 PDIA6Q15084 440 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms