RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 USP17L24Q0WX57 530 aa7.95□□□□□ -1.14
CLK1-208ENST00000464454 CCDC102BQ68D86 513 aa7.95□□□□□ -1.14
CLK1-208ENST00000464454 TPCN2Q8NHX9 752 aa7.95□□□□□ -1.14
CLK1-208ENST00000464454 TMEM229AB2RXF0 380 aa7.94□□□□□ -1.14
CLK1-208ENST00000464454 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.94□□□□□ -1.142e-6■■□□□ 13.3
CLK1-208ENST00000464454 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
CLK1-208ENST00000464454 RNF217Q8TC41 542 aa7.94□□□□□ -1.14
CLK1-208ENST00000464454 ZNF594Q96JF6 807 aaPredicted RBP7.94□□□□□ -1.14
CLK1-208ENST00000464454 ARXQ96QS3 562 aa7.94□□□□□ -1.14
CLK1-208ENST00000464454 STK17AQ9UEE5 414 aa7.94□□□□□ -1.14
CLK1-208ENST00000464454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.93□□□□□ -1.14
CLK1-208ENST00000464454 M0R2N6 131 aa7.93□□□□□ -1.14
CLK1-208ENST00000464454 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
CLK1-208ENST00000464454 WFS1O76024 890 aa7.93□□□□□ -1.14
CLK1-208ENST00000464454 INSM1Q01101 510 aaPredicted RBP7.93□□□□□ -1.14
CLK1-208ENST00000464454 PTK7Q13308 1070 aa7.93□□□□□ -1.14
CLK1-208ENST00000464454 TLR1Q15399 786 aa7.93□□□□□ -1.14
CLK1-208ENST00000464454 CRTC2Q53ET0 693 aaPredicted RBP7.93□□□□□ -1.14
CLK1-208ENST00000464454 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
CLK1-208ENST00000464454 FOXD4L5Q5VV16 416 aaPredicted RBP7.93□□□□□ -1.14
CLK1-208ENST00000464454 KIAA1024Q9UPX6 916 aa7.93□□□□□ -1.14
CLK1-208ENST00000464454 HRH3Q9Y5N1 445 aa7.93□□□□□ -1.14
CLK1-208ENST00000464454 SMTNP53814 917 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 SEC13P55735 322 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 CENPCQ03188 943 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 ELOAQ14241 798 aaKnown RBP7.92□□□□□ -1.14
CLK1-208ENST00000464454 LYSMD3Q7Z3D4 306 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 NBPF15Q8N660 670 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 SLC4A9Q96Q91 983 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 ZSCAN10Q96SZ4 725 aaPredicted RBP7.92□□□□□ -1.14
CLK1-208ENST00000464454 ARID3AQ99856 593 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 ZNF358Q9NW07 568 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 DNMT3LQ9UJW3 386 aa7.92□□□□□ -1.14
CLK1-208ENST00000464454 ATG7O95352 703 aa7.91□□□□□ -1.14
CLK1-208ENST00000464454 SNRPBP14678 240 aaKnown RBP7.91□□□□□ -1.14
CLK1-208ENST00000464454 SRPK2P78362 688 aaKnown RBP7.91□□□□□ -1.14
CLK1-208ENST00000464454 ANKMY2Q8IV38 441 aa7.91□□□□□ -1.14
CLK1-208ENST00000464454 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLK1-208ENST00000464454 GRIP2Q9C0E4 1043 aa7.91□□□□□ -1.14
CLK1-208ENST00000464454 SERTAD1Q9UHV2 236 aa7.91□□□□□ -1.14
CLK1-208ENST00000464454 STAU1O95793 577 aaKnown RBP7.9□□□□□ -1.14
CLK1-208ENST00000464454 DPYDQ12882 1025 aa7.9□□□□□ -1.14
CLK1-208ENST00000464454 CDCA8Q53HL2 280 aa7.9□□□□□ -1.14
CLK1-208ENST00000464454 GNASQ5JWF2 1037 aa7.9□□□□□ -1.14
CLK1-208ENST00000464454 TMEM214Q6NUQ4 689 aaKnown RBP7.9□□□□□ -1.14
CLK1-208ENST00000464454 FAM200AQ8TCP9 573 aa7.9□□□□□ -1.14
CLK1-208ENST00000464454 FHDC1Q9C0D6 1143 aaPredicted RBP7.9□□□□□ -1.14
CLK1-208ENST00000464454 NOVA2Q9UNW9 492 aaKnown RBP7.9□□□□□ -1.14
CLK1-208ENST00000464454 ACIN1Q9UKV3 1341 aaKnown RBP7.89□□□□□ -1.15
CLK1-208ENST00000464454 A6NJY4 79 aa7.89□□□□□ -1.15
CLK1-208ENST00000464454 FIGNL2A6NMB9 653 aa7.89□□□□□ -1.15
CLK1-208ENST00000464454 SPATA31C2B4DYI2 1134 aa7.89□□□□□ -1.15
CLK1-208ENST00000464454 WIPF1O43516 503 aa7.89□□□□□ -1.15
CLK1-208ENST00000464454 DKK1O94907 266 aa7.89□□□□□ -1.15
CLK1-208ENST00000464454 MTFR1Q15390 333 aa7.89□□□□□ -1.15
CLK1-208ENST00000464454 WDR44Q5JSH3 913 aa7.89□□□□□ -1.15
CLK1-208ENST00000464454 CDK2AP1O14519 115 aa7.88□□□□□ -1.15
CLK1-208ENST00000464454 TAS1R3Q7RTX0 852 aa7.88□□□□□ -1.15
CLK1-208ENST00000464454 PRICKLE2Q7Z3G6 844 aa7.88□□□□□ -1.15
CLK1-208ENST00000464454 PPARGC1BQ86YN6 1023 aaKnown RBP7.88□□□□□ -1.15
CLK1-208ENST00000464454 RHBDD1Q8TEB9 315 aa7.88□□□□□ -1.15
CLK1-208ENST00000464454 SFI1A8K8P3 1242 aa7.87□□□□□ -1.15
CLK1-208ENST00000464454 SOBPA7XYQ1 873 aa7.86□□□□□ -1.15
CLK1-208ENST00000464454 NBPF10Q6P3W6 841 aaKnown RBP7.86□□□□□ -1.15
CLK1-208ENST00000464454 HOMEZQ8IX15 550 aa7.86□□□□□ -1.15
CLK1-208ENST00000464454 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
CLK1-208ENST00000464454 SCHIP1Q9P0W5 487 aaPredicted RBP7.86□□□□□ -1.15
CLK1-208ENST00000464454 EPHA4P54764 986 aa7.85□□□□□ -1.15
CLK1-208ENST00000464454 PTSQ03393 145 aa7.85□□□□□ -1.15
CLK1-208ENST00000464454 POU4F2Q12837 409 aa7.85□□□□□ -1.15
CLK1-208ENST00000464454 SWI5Q1ZZU3 235 aa7.85□□□□□ -1.15
CLK1-208ENST00000464454 TNS4Q8IZW8 715 aa7.85□□□□□ -1.15
CLK1-208ENST00000464454 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
CLK1-208ENST00000464454 ZMIZ1Q9ULJ6 1067 aa7.85□□□□□ -1.15
CLK1-208ENST00000464454 CHMP3Q9Y3E7 222 aa7.85□□□□□ -1.15
CLK1-208ENST00000464454 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
CLK1-208ENST00000464454 FOXK2Q01167 660 aa7.84□□□□□ -1.15
CLK1-208ENST00000464454 NPAS3Q8IXF0 933 aa7.84□□□□□ -1.15
CLK1-208ENST00000464454 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
CLK1-208ENST00000464454 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
CLK1-208ENST00000464454 IQSEC3Q9UPP2 1182 aaPredicted RBP7.84□□□□□ -1.15
CLK1-208ENST00000464454 FAM181BA6NEQ2 426 aa7.83□□□□□ -1.16
CLK1-208ENST00000464454 RHOQP17081 205 aa7.83□□□□□ -1.16
CLK1-208ENST00000464454 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
CLK1-208ENST00000464454 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
CLK1-208ENST00000464454 SLC9A9Q8IVB4 645 aa7.83□□□□□ -1.16
CLK1-208ENST00000464454 STK32AQ8WU08 396 aa7.83□□□□□ -1.16
CLK1-208ENST00000464454 TIMMDC1Q9NPL8 285 aa7.83□□□□□ -1.16
CLK1-208ENST00000464454 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
CLK1-208ENST00000464454 A0A1B0GTH6 734 aa7.82□□□□□ -1.16
CLK1-208ENST00000464454 SLC35F4A4IF30 521 aa7.82□□□□□ -1.16
CLK1-208ENST00000464454 PSMA6P60900 246 aaKnown RBP7.82□□□□□ -1.16
CLK1-208ENST00000464454 TSPAN10Q9H1Z9 355 aaPredicted RBP7.82□□□□□ -1.16
CLK1-208ENST00000464454 CABP1Q9NZU7 370 aa7.82□□□□□ -1.16
CLK1-208ENST00000464454 NXF1Q9UBU9 619 aaKnown RBP7.82□□□□□ -1.16
CLK1-208ENST00000464454 IGFBP4P22692 258 aa7.81□□□□□ -1.16
CLK1-208ENST00000464454 PLA2G4AP47712 749 aa7.81□□□□□ -1.16
CLK1-208ENST00000464454 PDE4CQ08493 712 aa7.81□□□□□ -1.16
CLK1-208ENST00000464454 TEAD4Q15561 434 aa7.81□□□□□ -1.16
CLK1-208ENST00000464454 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms