RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 NBPF15Q8N660 670 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 NLRP3Q96P20 1036 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 TRERF1Q96PN7 1200 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 GRIP2Q9C0E4 1043 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 GRIN2CQ14957 1233 aa8.37□□□□□ -1.07
PTPN12-210ENST00000464313 MTMR14Q8NCE2 650 aa8.36□□□□□ -1.07
PTPN12-210ENST00000464313 BANK1Q8NDB2 785 aa8.36□□□□□ -1.07
PTPN12-210ENST00000464313 TRIM52Q96A61 297 aa8.36□□□□□ -1.07
PTPN12-210ENST00000464313 OXCT2Q9BYC2 517 aaPredicted RBP8.36□□□□□ -1.07
PTPN12-210ENST00000464313 NUCKS1Q9H1E3 243 aaKnown RBP8.36□□□□□ -1.07
PTPN12-210ENST00000464313 RRAGCQ9HB90 399 aa8.36□□□□□ -1.07
PTPN12-210ENST00000464313 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
PTPN12-210ENST00000464313 CLN3Q13286 438 aa8.35□□□□□ -1.07
PTPN12-210ENST00000464313 CD163Q86VB7 1156 aa8.35□□□□□ -1.07
PTPN12-210ENST00000464313 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
PTPN12-210ENST00000464313 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
PTPN12-210ENST00000464313 ARHGEF10LQ9HCE6 1279 aa8.35□□□□□ -1.07
PTPN12-210ENST00000464313 TIMMDC1Q9NPL8 285 aa8.35□□□□□ -1.07
PTPN12-210ENST00000464313 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
PTPN12-210ENST00000464313 THBS1P07996 1170 aa8.34□□□□□ -1.07
PTPN12-210ENST00000464313 UBTFP17480 764 aaKnown RBP8.34□□□□□ -1.07
PTPN12-210ENST00000464313 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
PTPN12-210ENST00000464313 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
PTPN12-210ENST00000464313 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
PTPN12-210ENST00000464313 RAB6BQ9NRW1 208 aa8.34□□□□□ -1.07
PTPN12-210ENST00000464313 PCDHB11Q9Y5F2 797 aa8.34□□□□□ -1.07
PTPN12-210ENST00000464313 SPATA31C2B4DYI2 1134 aa8.33□□□□□ -1.08
PTPN12-210ENST00000464313 WASLO00401 505 aaPredicted RBP8.33□□□□□ -1.08
PTPN12-210ENST00000464313 F11P03951 625 aa8.33□□□□□ -1.08
PTPN12-210ENST00000464313 DOC2BQ14184 412 aa8.33□□□□□ -1.08
PTPN12-210ENST00000464313 CYP2U1Q7Z449 544 aa8.33□□□□□ -1.08
PTPN12-210ENST00000464313 OSBPL3Q9H4L5 887 aa8.33□□□□□ -1.08
PTPN12-210ENST00000464313 GPAMQ9HCL2 828 aa8.33□□□□□ -1.08
PTPN12-210ENST00000464313 TAS1R3Q7RTX0 852 aa8.32□□□□□ -1.08
PTPN12-210ENST00000464313 CHRNA4P43681 627 aa8.31□□□□□ -1.08
PTPN12-210ENST00000464313 PHKA2P46019 1235 aa8.31□□□□□ -1.08
PTPN12-210ENST00000464313 MAP2K3P46734 347 aa8.31□□□□□ -1.08
PTPN12-210ENST00000464313 RNF20Q5VTR2 975 aa8.31□□□□□ -1.08
PTPN12-210ENST00000464313 C1orf229Q6ZS94 237 aaPredicted RBP8.31□□□□□ -1.08
PTPN12-210ENST00000464313 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
PTPN12-210ENST00000464313 TRAK2O60296 914 aa8.3□□□□□ -1.08
PTPN12-210ENST00000464313 WDR44Q5JSH3 913 aa8.3□□□□□ -1.08
PTPN12-210ENST00000464313 LINC00114Q6XXX2 140 aa8.3□□□□□ -1.08
PTPN12-210ENST00000464313 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
PTPN12-210ENST00000464313 EDARADDQ8WWZ3 215 aa8.29□□□□□ -1.08
PTPN12-210ENST00000464313 KLRG1Q96E93 195 aa8.29□□□□□ -1.08
PTPN12-210ENST00000464313 ZMYND15Q9H091 742 aa8.29□□□□□ -1.08
PTPN12-210ENST00000464313 GOLGA2P5Q9HBQ8 144 aa8.29□□□□□ -1.08
PTPN12-210ENST00000464313 COG6Q9Y2V7 657 aa8.29□□□□□ -1.08
PTPN12-210ENST00000464313 IL2RAP01589 272 aa8.28□□□□□ -1.08
PTPN12-210ENST00000464313 NR1H3Q13133 447 aa8.28□□□□□ -1.08
PTPN12-210ENST00000464313 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
PTPN12-210ENST00000464313 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
PTPN12-210ENST00000464313 PIK3R2O00459 728 aa8.27□□□□□ -1.09
PTPN12-210ENST00000464313 CENPCQ03188 943 aa8.27□□□□□ -1.09
PTPN12-210ENST00000464313 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
PTPN12-210ENST00000464313 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
PTPN12-210ENST00000464313 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
PTPN12-210ENST00000464313 ESF1Q9H501 851 aaKnown RBP8.27□□□□□ -1.09
PTPN12-210ENST00000464313 GDPD2Q9HCC8 539 aa8.27□□□□□ -1.09
PTPN12-210ENST00000464313 ZFP64Q9NPA5 681 aa8.27□□□□□ -1.09
PTPN12-210ENST00000464313 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
PTPN12-210ENST00000464313 UBAP2LQ14157 1087 aaKnown RBP8.26□□□□□ -1.09
PTPN12-210ENST00000464313 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
PTPN12-210ENST00000464313 RUBCNLQ9H714 662 aa8.26□□□□□ -1.09
PTPN12-210ENST00000464313 GDF2Q9UK05 429 aaPredicted RBP8.26□□□□□ -1.09
PTPN12-210ENST00000464313 SUPT5HO00267 1087 aaKnown RBP8.25□□□□□ -1.09
PTPN12-210ENST00000464313 GNB5O14775 395 aa8.25□□□□□ -1.09
PTPN12-210ENST00000464313 ABL2P42684 1182 aa8.25□□□□□ -1.09
PTPN12-210ENST00000464313 ARTNQ5T4W7 220 aa8.25□□□□□ -1.09
PTPN12-210ENST00000464313 ZSCAN10Q96SZ4 725 aaPredicted RBP8.25□□□□□ -1.09
PTPN12-210ENST00000464313 CDCA7Q9BWT1 371 aaPredicted RBP8.25□□□□□ -1.09
PTPN12-210ENST00000464313 SOCS7O14512 581 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 RAD21O60216 631 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 GPR37L1O60883 481 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 GNRH1P01148 92 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 AMPD1P23109 780 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 MCCD1P59942 119 aaPredicted RBP8.24□□□□□ -1.09
PTPN12-210ENST00000464313 NBPF11Q86T75 865 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 NDUFB9Q9Y6M9 179 aa8.24□□□□□ -1.09
PTPN12-210ENST00000464313 A0A1B0GTH6 734 aa8.23□□□□□ -1.09
PTPN12-210ENST00000464313 APBB1O00213 710 aa8.23□□□□□ -1.09
PTPN12-210ENST00000464313 C2CD2LO14523 706 aa8.23□□□□□ -1.09
PTPN12-210ENST00000464313 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
PTPN12-210ENST00000464313 PROSER2Q86WR7 435 aaPredicted RBP8.23□□□□□ -1.09
PTPN12-210ENST00000464313 CCDC85AQ96PX6 553 aaPredicted RBP8.23□□□□□ -1.09
PTPN12-210ENST00000464313 FHDC1Q9C0D6 1143 aaPredicted RBP8.23□□□□□ -1.09
PTPN12-210ENST00000464313 PHF24Q9UPV7 400 aa8.23□□□□□ -1.09
PTPN12-210ENST00000464313 A6NJR5 290 aa8.22□□□□□ -1.09
PTPN12-210ENST00000464313 MSX1P28360 303 aa8.22□□□□□ -1.09
PTPN12-210ENST00000464313 TMEM214Q6NUQ4 689 aaKnown RBP8.22□□□□□ -1.09
PTPN12-210ENST00000464313 ABHD17AQ96GS6 310 aa8.22□□□□□ -1.09
PTPN12-210ENST00000464313 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
PTPN12-210ENST00000464313 NOP53Q9NZM5 478 aaKnown RBP8.22□□□□□ -1.09
PTPN12-210ENST00000464313 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.1
PTPN12-210ENST00000464313 BMP4P12644 408 aa8.21□□□□□ -1.1
PTPN12-210ENST00000464313 GATA4P43694 442 aa8.21□□□□□ -1.1
PTPN12-210ENST00000464313 GNASQ5JWF2 1037 aa8.21□□□□□ -1.1
PTPN12-210ENST00000464313 GOLGA6L1Q8N7Z2 621 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms