RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 C8orf37Q96NL8 207 aa18.51■□□□□ 0.55
COL5A1-205ENST00000464187 PKD1L3Q7Z443 1732 aa18.5■□□□□ 0.55
COL5A1-205ENST00000464187 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
COL5A1-205ENST00000464187 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
COL5A1-205ENST00000464187 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
COL5A1-205ENST00000464187 PARP4Q9UKK3 1724 aaKnown RBP18.5■□□□□ 0.55
COL5A1-205ENST00000464187 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
COL5A1-205ENST00000464187 IPO9Q96P70 1041 aaKnown RBP18.49■□□□□ 0.55
COL5A1-205ENST00000464187 AAMPQ13685 434 aa18.49■□□□□ 0.55
COL5A1-205ENST00000464187 ALDH1L2Q3SY69 923 aa18.49■□□□□ 0.55
COL5A1-205ENST00000464187 DCAF5Q96JK2 942 aa18.49■□□□□ 0.55
COL5A1-205ENST00000464187 NOP58Q9Y2X3 529 aaKnown RBP18.49■□□□□ 0.55
COL5A1-205ENST00000464187 KDM6AO15550 1401 aaPredicted RBP18.48■□□□□ 0.55
COL5A1-205ENST00000464187 HSP90AB1P08238 724 aaKnown RBP18.48■□□□□ 0.55
COL5A1-205ENST00000464187 LRP6O75581 1613 aa18.48■□□□□ 0.55
COL5A1-205ENST00000464187 SPATA31A1Q5TZJ5 1347 aa18.47■□□□□ 0.55
COL5A1-205ENST00000464187 BTBD11A6QL63 1104 aa18.47■□□□□ 0.55
COL5A1-205ENST00000464187 ZKSCAN2Q63HK3 967 aa18.47■□□□□ 0.55
COL5A1-205ENST00000464187 UNC5CLQ8IV45 518 aa18.47■□□□□ 0.55
COL5A1-205ENST00000464187 DISP2A7MBM2 1401 aa18.47■□□□□ 0.55
COL5A1-205ENST00000464187 NRAPQ86VF7 1730 aa18.47■□□□□ 0.55
COL5A1-205ENST00000464187 DDX54Q8TDD1 881 aaKnown RBP18.46■□□□□ 0.55
COL5A1-205ENST00000464187 ADAMTS7Q9UKP4 1686 aa18.46■□□□□ 0.55
COL5A1-205ENST00000464187 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.55
COL5A1-205ENST00000464187 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
COL5A1-205ENST00000464187 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
COL5A1-205ENST00000464187 MVPQ14764 893 aaKnown RBP18.45■□□□□ 0.54
COL5A1-205ENST00000464187 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
COL5A1-205ENST00000464187 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
COL5A1-205ENST00000464187 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
COL5A1-205ENST00000464187 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
COL5A1-205ENST00000464187 RGS3P49796 1198 aa18.44■□□□□ 0.54
COL5A1-205ENST00000464187 DZIP1LQ8IYY4 767 aaKnown RBP18.44■□□□□ 0.54
COL5A1-205ENST00000464187 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
COL5A1-205ENST00000464187 BCL9LQ86UU0 1499 aa18.44■□□□□ 0.54
COL5A1-205ENST00000464187 NKX1-1Q15270 411 aaPredicted RBP18.44■□□□□ 0.54
COL5A1-205ENST00000464187 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
COL5A1-205ENST00000464187 PCDHB15Q9Y5E8 787 aa18.44■□□□□ 0.54
COL5A1-205ENST00000464187 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
COL5A1-205ENST00000464187 KIF16BQ96L93 1317 aa18.43■□□□□ 0.54
COL5A1-205ENST00000464187 KCNQ3O43525 872 aa18.42■□□□□ 0.54
COL5A1-205ENST00000464187 TRIM27P14373 513 aa18.42■□□□□ 0.54
COL5A1-205ENST00000464187 EIF4A1P60842 406 aaKnown RBP18.42■□□□□ 0.54
COL5A1-205ENST00000464187 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
COL5A1-205ENST00000464187 C8orf34Q49A92 452 aa18.42■□□□□ 0.54
COL5A1-205ENST00000464187 MEX3CQ5U5Q3 659 aaKnown RBP18.42■□□□□ 0.54
COL5A1-205ENST00000464187 FTSJ3Q8IY81 847 aaKnown RBP18.42■□□□□ 0.54
COL5A1-205ENST00000464187 CDCA7Q9BWT1 371 aaPredicted RBP18.42■□□□□ 0.54
COL5A1-205ENST00000464187 MRPL50Q8N5N7 158 aaKnown RBP18.42■□□□□ 0.54
COL5A1-205ENST00000464187 NOB1Q9ULX3 412 aaKnown RBP18.42■□□□□ 0.54
COL5A1-205ENST00000464187 EXOC5O00471 708 aa18.41■□□□□ 0.54
COL5A1-205ENST00000464187 CABP4P57796 275 aa18.41■□□□□ 0.54
COL5A1-205ENST00000464187 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
COL5A1-205ENST00000464187 VPS72Q15906 364 aa18.4■□□□□ 0.54
COL5A1-205ENST00000464187 ATF7IPQ6VMQ6 1270 aa18.4■□□□□ 0.54
COL5A1-205ENST00000464187 USP21Q9UK80 565 aa18.4■□□□□ 0.54
COL5A1-205ENST00000464187 MRC1P22897 1456 aa18.4■□□□□ 0.54
COL5A1-205ENST00000464187 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
COL5A1-205ENST00000464187 BARGINQ6ZT62 677 aa18.39■□□□□ 0.54
COL5A1-205ENST00000464187 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.54
COL5A1-205ENST00000464187 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
COL5A1-205ENST00000464187 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
COL5A1-205ENST00000464187 KDM3BQ7LBC6 1761 aa18.39■□□□□ 0.53
COL5A1-205ENST00000464187 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
COL5A1-205ENST00000464187 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
COL5A1-205ENST00000464187 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
COL5A1-205ENST00000464187 DDB1Q16531 1140 aa18.37■□□□□ 0.53
COL5A1-205ENST00000464187 SIPA1L3O60292 1781 aaPredicted RBP18.37■□□□□ 0.53
COL5A1-205ENST00000464187 TNS2Q63HR2 1409 aa18.37■□□□□ 0.53
COL5A1-205ENST00000464187 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
COL5A1-205ENST00000464187 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 HOXB7P09629 217 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
COL5A1-205ENST00000464187 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 AFF2P51816 1311 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 HEG1Q9ULI3 1381 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 GIGYF1O75420 1035 aaPredicted RBP18.35■□□□□ 0.53
COL5A1-205ENST00000464187 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
COL5A1-205ENST00000464187 RWDD1Q9H446 243 aaPredicted RBP18.35■□□□□ 0.53
COL5A1-205ENST00000464187 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
COL5A1-205ENST00000464187 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.53
COL5A1-205ENST00000464187 ZNF496Q96IT1 587 aaPredicted RBP18.33■□□□□ 0.52
COL5A1-205ENST00000464187 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
COL5A1-205ENST00000464187 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
COL5A1-205ENST00000464187 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
COL5A1-205ENST00000464187 PRAMEF22A3QJZ6 481 aa18.31■□□□□ 0.52
COL5A1-205ENST00000464187 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.31■□□□□ 0.52
COL5A1-205ENST00000464187 API5Q9BZZ5 524 aaKnown RBP18.3■□□□□ 0.52
COL5A1-205ENST00000464187 PTPRCP08575 1304 aa18.3■□□□□ 0.52
COL5A1-205ENST00000464187 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
COL5A1-205ENST00000464187 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
COL5A1-205ENST00000464187 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
COL5A1-205ENST00000464187 TOGARAM1Q9Y4F4 1720 aa18.3■□□□□ 0.52
COL5A1-205ENST00000464187 HDAC1Q13547 482 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms