RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 IL13P35225 146 aa23.84■■□□□ 1.41
COL5A1-204ENST00000463925 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
COL5A1-204ENST00000463925 SSFA2P28290 1259 aa23.83■■□□□ 1.41
COL5A1-204ENST00000463925 ITPK1Q13572 414 aa23.83■■□□□ 1.41
COL5A1-204ENST00000463925 NLGN2Q8NFZ4 835 aa23.83■■□□□ 1.41
COL5A1-204ENST00000463925 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.82■■□□□ 1.4
COL5A1-204ENST00000463925 ATP6V1AP38606 617 aa23.82■■□□□ 1.4
COL5A1-204ENST00000463925 GPR162Q16538 588 aa23.82■■□□□ 1.4
COL5A1-204ENST00000463925 SULT6B1Q6IMI4 303 aa23.82■■□□□ 1.4
COL5A1-204ENST00000463925 PHF14O94880 888 aa23.8■■□□□ 1.4
COL5A1-204ENST00000463925 C1orf141Q5JVX7 400 aa23.79■■□□□ 1.4
COL5A1-204ENST00000463925 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
COL5A1-204ENST00000463925 GNPATO15228 680 aa23.78■■□□□ 1.4
COL5A1-204ENST00000463925 MTHFSP49914 203 aa23.78■■□□□ 1.4
COL5A1-204ENST00000463925 CABP4P57796 275 aa23.78■■□□□ 1.4
COL5A1-204ENST00000463925 SMIM5Q71RC9 77 aa23.77■■□□□ 1.4
COL5A1-204ENST00000463925 CD2APQ9Y5K6 639 aa23.77■■□□□ 1.4
COL5A1-204ENST00000463925 ZNF784Q8NCA9 323 aaPredicted RBP23.76■■□□□ 1.39
COL5A1-204ENST00000463925 SLC4A9Q96Q91 983 aa23.76■■□□□ 1.39
COL5A1-204ENST00000463925 COL5A3P25940 1745 aaPredicted RBP23.76■■□□□ 1.39
COL5A1-204ENST00000463925 SCN11AQ9UI33 1791 aa23.74■■□□□ 1.39
COL5A1-204ENST00000463925 CC2D1BQ5T0F9 858 aaKnown RBP23.74■■□□□ 1.39
COL5A1-204ENST00000463925 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
COL5A1-204ENST00000463925 RBM42Q9BTD8 480 aaKnown RBP23.74■■□□□ 1.39
COL5A1-204ENST00000463925 CNTNAP4Q9C0A0 1308 aa23.73■■□□□ 1.39
COL5A1-204ENST00000463925 GOLGB1Q14789 3259 aaKnown RBP23.72■■□□□ 1.39
COL5A1-204ENST00000463925 AKAP4Q5JQC9 854 aa23.72■■□□□ 1.39
COL5A1-204ENST00000463925 RC3H1Q5TC82 1133 aaKnown RBP23.72■■□□□ 1.39
COL5A1-204ENST00000463925 CICQ96RK0 1608 aaPredicted RBP23.72■■□□□ 1.39
COL5A1-204ENST00000463925 YBX3P16989 372 aaKnown RBP eCLIP23.71■■□□□ 1.39
COL5A1-204ENST00000463925 RTCBQ9Y3I0 505 aaKnown RBP23.71■■□□□ 1.39
COL5A1-204ENST00000463925 MRC1P22897 1456 aa23.7■■□□□ 1.38
COL5A1-204ENST00000463925 GRIN3BO60391 1043 aa23.7■■□□□ 1.38
COL5A1-204ENST00000463925 DIAPH1O60610 1272 aaKnown RBP23.7■■□□□ 1.38
COL5A1-204ENST00000463925 ADRA2BP18089 450 aa23.7■■□□□ 1.38
COL5A1-204ENST00000463925 NFATC2IPQ8NCF5 419 aa23.7■■□□□ 1.38
COL5A1-204ENST00000463925 COL3A1P02461 1466 aaPredicted RBP23.69■■□□□ 1.38
COL5A1-204ENST00000463925 HMOX1P09601 288 aa23.68■■□□□ 1.38
COL5A1-204ENST00000463925 TRAPPC3LQ5T215 181 aa23.68■■□□□ 1.38
COL5A1-204ENST00000463925 MYH14Q7Z406 1995 aaKnown RBP23.67■■□□□ 1.38
COL5A1-204ENST00000463925 RPS6KA4O75676 772 aa23.67■■□□□ 1.38
COL5A1-204ENST00000463925 TJP1Q07157 1748 aa23.67■■□□□ 1.38
COL5A1-204ENST00000463925 ADAMTS7Q9UKP4 1686 aa23.67■■□□□ 1.38
COL5A1-204ENST00000463925 PTCD1O75127 700 aaKnown RBP23.66■■□□□ 1.38
COL5A1-204ENST00000463925 SLC52A2Q9HAB3 445 aa23.65■■□□□ 1.38
COL5A1-204ENST00000463925 C4AP0C0L4 1744 aa23.64■■□□□ 1.38
COL5A1-204ENST00000463925 MMP10P09238 476 aa23.64■■□□□ 1.37
COL5A1-204ENST00000463925 ARHGEF1Q92888 912 aaKnown RBP23.64■■□□□ 1.37
COL5A1-204ENST00000463925 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
COL5A1-204ENST00000463925 RNMTO43148 476 aaKnown RBP23.63■■□□□ 1.37
COL5A1-204ENST00000463925 MTHFSDQ2M296 383 aaKnown RBP23.63■■□□□ 1.37
COL5A1-204ENST00000463925 NLGN1Q8N2Q7 840 aa23.63■■□□□ 1.37
COL5A1-204ENST00000463925 KIF13BQ9NQT8 1826 aa23.62■■□□□ 1.37
COL5A1-204ENST00000463925 CRKLP46109 303 aaKnown RBP23.62■■□□□ 1.37
COL5A1-204ENST00000463925 LGR6Q9HBX8 967 aa23.62■■□□□ 1.37
COL5A1-204ENST00000463925 GYS1P13807 737 aa23.61■■□□□ 1.37
COL5A1-204ENST00000463925 RFC4P35249 363 aa23.61■■□□□ 1.37
COL5A1-204ENST00000463925 KCPQ6ZWJ8 1503 aa23.59■■□□□ 1.37
COL5A1-204ENST00000463925 C10orf71Q711Q0 1435 aa23.59■■□□□ 1.37
COL5A1-204ENST00000463925 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.37
COL5A1-204ENST00000463925 PXDNLA1KZ92 1463 aa23.57■■□□□ 1.36
COL5A1-204ENST00000463925 KIAA1551Q9HCM1 1747 aa23.57■■□□□ 1.36
COL5A1-204ENST00000463925 U2SURPO15042 1029 aaKnown RBP23.57■■□□□ 1.36
COL5A1-204ENST00000463925 INTS5Q6P9B9 1019 aaKnown RBP23.56■■□□□ 1.36
COL5A1-204ENST00000463925 USP42Q9H9J4 1324 aaKnown RBP23.56■■□□□ 1.36
COL5A1-204ENST00000463925 SLC39A6Q13433 755 aa23.55■■□□□ 1.36
COL5A1-204ENST00000463925 DNAJC10Q8IXB1 793 aa23.55■■□□□ 1.36
COL5A1-204ENST00000463925 UBR2Q8IWV8 1755 aa23.55■■□□□ 1.36
COL5A1-204ENST00000463925 TGFB2P61812 414 aa23.54■■□□□ 1.36
COL5A1-204ENST00000463925 GAS2L2Q8NHY3 880 aa23.54■■□□□ 1.36
COL5A1-204ENST00000463925 CCDC87Q9NVE4 849 aa23.54■■□□□ 1.36
COL5A1-204ENST00000463925 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
COL5A1-204ENST00000463925 CFAP53Q96M91 514 aa23.53■■□□□ 1.36
COL5A1-204ENST00000463925 PARP3Q9Y6F1 533 aa23.53■■□□□ 1.36
COL5A1-204ENST00000463925 ADCY9O60503 1353 aa23.52■■□□□ 1.36
COL5A1-204ENST00000463925 CYP19A1P11511 503 aaPredicted RBP23.52■■□□□ 1.36
COL5A1-204ENST00000463925 SRP68Q9UHB9 627 aaKnown RBP23.52■■□□□ 1.36
COL5A1-204ENST00000463925 SOS1Q07889 1333 aaPredicted RBP23.52■■□□□ 1.36
COL5A1-204ENST00000463925 WWC3Q9ULE0 1092 aa23.51■■□□□ 1.35
COL5A1-204ENST00000463925 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
COL5A1-204ENST00000463925 GNAT3A8MTJ3 354 aa23.5■■□□□ 1.35
COL5A1-204ENST00000463925 C1QTNF8P60827 252 aa23.5■■□□□ 1.35
COL5A1-204ENST00000463925 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
COL5A1-204ENST00000463925 GIGYF1O75420 1035 aaPredicted RBP23.49■■□□□ 1.35
COL5A1-204ENST00000463925 FKBP8Q14318 412 aa23.49■■□□□ 1.35
COL5A1-204ENST00000463925 SIPA1L3O60292 1781 aaPredicted RBP23.49■■□□□ 1.35
COL5A1-204ENST00000463925 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
COL5A1-204ENST00000463925 IL17REQ8NFR9 667 aa23.48■■□□□ 1.35
COL5A1-204ENST00000463925 RSPH6AQ9H0K4 717 aa23.48■■□□□ 1.35
COL5A1-204ENST00000463925 COL15A1P39059 1388 aa23.48■■□□□ 1.35
COL5A1-204ENST00000463925 PPP2R1AP30153 589 aa23.47■■□□□ 1.35
COL5A1-204ENST00000463925 PRKAR2BP31323 418 aa23.47■■□□□ 1.35
COL5A1-204ENST00000463925 TEFQ10587 303 aa23.47■■□□□ 1.35
COL5A1-204ENST00000463925 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
COL5A1-204ENST00000463925 ZBTB1Q9Y2K1 713 aa23.47■■□□□ 1.35
COL5A1-204ENST00000463925 CEMIPQ8WUJ3 1361 aa23.47■■□□□ 1.35
COL5A1-204ENST00000463925 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
COL5A1-204ENST00000463925 DDR1Q08345 913 aa23.46■■□□□ 1.35
COL5A1-204ENST00000463925 A0A0G2JLW4 131 aa23.45■■□□□ 1.34
COL5A1-204ENST00000463925 ZPR1O75312 459 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms