RNA–Protein interactions for RNA: ENST00000463875.6

GTDC1-212, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTDC1, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-212ENST00000463875 PCDH11XQ9BZA7 1347 aa9.93□□□□□ -0.82
GTDC1-212ENST00000463875 PCDH11YQ9BZA8 1340 aa9.93□□□□□ -0.82
GTDC1-212ENST00000463875 KDM6AO15550 1401 aaPredicted RBP9.93□□□□□ -0.82
GTDC1-212ENST00000463875 GNPATO15228 680 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 LMNB1P20700 586 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 SMIM5Q71RC9 77 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.92□□□□□ -0.82
GTDC1-212ENST00000463875 MEGF6O75095 1541 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 LOC102724428A0A0B4J2F2 783 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 CCDC85CA6NKD9 419 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 SIK1P57059 783 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 RAPGEF4Q8WZA2 1011 aa9.92□□□□□ -0.82
GTDC1-212ENST00000463875 LTV1Q96GA3 475 aaPredicted RBP9.92□□□□□ -0.82
GTDC1-212ENST00000463875 SBF1O95248 1867 aa9.91□□□□□ -0.82
GTDC1-212ENST00000463875 MAP2K1Q02750 393 aaPredicted RBP9.91□□□□□ -0.82
GTDC1-212ENST00000463875 NME9Q86XW9 330 aa9.91□□□□□ -0.82
GTDC1-212ENST00000463875 LINC00116Q8NCU8 138 aa9.91□□□□□ -0.82
GTDC1-212ENST00000463875 CD163L1Q9NR16 1453 aa9.9□□□□□ -0.82
GTDC1-212ENST00000463875 HSPA8P11142 646 aaKnown RBP9.9□□□□□ -0.82
GTDC1-212ENST00000463875 RTCBQ9Y3I0 505 aaKnown RBP9.9□□□□□ -0.82
GTDC1-212ENST00000463875 C4AP0C0L4 1744 aa9.9□□□□□ -0.83
GTDC1-212ENST00000463875 MON2Q7Z3U7 1717 aa9.9□□□□□ -0.83
GTDC1-212ENST00000463875 SBNO2Q9Y2G9 1366 aa9.89□□□□□ -0.83
GTDC1-212ENST00000463875 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
GTDC1-212ENST00000463875 VEGFBP49765 207 aa9.89□□□□□ -0.83
GTDC1-212ENST00000463875 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
GTDC1-212ENST00000463875 POTECB2RU33 542 aa9.88□□□□□ -0.83
GTDC1-212ENST00000463875 HOXC9P31274 260 aa9.88□□□□□ -0.83
GTDC1-212ENST00000463875 PIGBQ92521 554 aa9.88□□□□□ -0.83
GTDC1-212ENST00000463875 GYS1P13807 737 aa9.88□□□□□ -0.83
GTDC1-212ENST00000463875 ATP6V1AP38606 617 aa9.88□□□□□ -0.83
GTDC1-212ENST00000463875 AMPHP49418 695 aa9.88□□□□□ -0.83
GTDC1-212ENST00000463875 HDGFL2Q7Z4V5 671 aaPredicted RBP9.88□□□□□ -0.83
GTDC1-212ENST00000463875 EDC4Q6P2E9 1401 aaKnown RBP9.87□□□□□ -0.83
GTDC1-212ENST00000463875 PASKQ96RG2 1323 aa9.87□□□□□ -0.83
GTDC1-212ENST00000463875 TMEM88BA6NKF7 163 aa9.87□□□□□ -0.83
GTDC1-212ENST00000463875 RFC4P35249 363 aa9.87□□□□□ -0.83
GTDC1-212ENST00000463875 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
GTDC1-212ENST00000463875 SMG6Q86US8 1419 aaKnown RBP9.87□□□□□ -0.83
GTDC1-212ENST00000463875 PDE4DIPQ5VU43 2346 aa9.86□□□□□ -0.83
GTDC1-212ENST00000463875 RTL1A6NKG5 1358 aa9.86□□□□□ -0.83
GTDC1-212ENST00000463875 MAP2P11137 1827 aaKnown RBP9.86□□□□□ -0.83
GTDC1-212ENST00000463875 ITPK1Q13572 414 aa9.86□□□□□ -0.83
GTDC1-212ENST00000463875 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
GTDC1-212ENST00000463875 NBPF6Q5VWK0 638 aa9.86□□□□□ -0.83
GTDC1-212ENST00000463875 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
GTDC1-212ENST00000463875 NBPF4Q96M43 638 aa9.86□□□□□ -0.83
GTDC1-212ENST00000463875 CYP27B1O15528 508 aa9.85□□□□□ -0.83
GTDC1-212ENST00000463875 RASSF7Q02833 373 aa9.85□□□□□ -0.83
GTDC1-212ENST00000463875 VIRMAQ69YN4 1812 aaKnown RBP9.85□□□□□ -0.83
GTDC1-212ENST00000463875 RASSF10A6NK89 507 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 RPS6KA4O75676 772 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 TERF2IPQ9NYB0 399 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 TMOD3Q9NYL9 352 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 ITGB4P16144 1822 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 CHRNA5P30532 468 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 DEFB115Q30KQ5 88 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 LDHDQ86WU2 507 aa9.84□□□□□ -0.83
GTDC1-212ENST00000463875 CNTNAP4Q9C0A0 1308 aa9.83□□□□□ -0.84
GTDC1-212ENST00000463875 COG3Q96JB2 828 aa9.83□□□□□ -0.84
GTDC1-212ENST00000463875 WDR33Q9C0J8 1336 aaKnown RBP9.82□□□□□ -0.84
GTDC1-212ENST00000463875 PRPF38BQ5VTL8 546 aaKnown RBP9.82□□□□□ -0.84
GTDC1-212ENST00000463875 ASAP1Q9ULH1 1129 aa9.82□□□□□ -0.84
GTDC1-212ENST00000463875 RAB3GAP2Q9H2M9 1393 aa9.82□□□□□ -0.84
GTDC1-212ENST00000463875 TIAM2Q8IVF5 1701 aa9.81□□□□□ -0.84
GTDC1-212ENST00000463875 ITGBL1O95965 494 aaPredicted RBP9.81□□□□□ -0.84
GTDC1-212ENST00000463875 TTLL6Q8N841 843 aa9.81□□□□□ -0.84
GTDC1-212ENST00000463875 CFAP44Q96MT7 982 aa9.81□□□□□ -0.84
GTDC1-212ENST00000463875 SPG7Q9UQ90 795 aa9.81□□□□□ -0.84
GTDC1-212ENST00000463875 ZNF831Q5JPB2 1677 aa9.81□□□□□ -0.84
GTDC1-212ENST00000463875 RGPD2P0DJD1 1756 aa9.81□□□□□ -0.84
GTDC1-212ENST00000463875 KDRP35968 1356 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 USHBP1Q8N6Y0 703 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.8□□□□□ -0.84
GTDC1-212ENST00000463875 NFKBIEO00221 500 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 CA12O43570 354 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 POTEIP0CG38 1075 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 POTEJP0CG39 1038 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 DDR1Q08345 913 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 TMC1Q8TDI8 760 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
GTDC1-212ENST00000463875 USP42Q9H9J4 1324 aaKnown RBP9.79□□□□□ -0.84
GTDC1-212ENST00000463875 POLRMTO00411 1230 aaKnown RBP9.79□□□□□ -0.84
GTDC1-212ENST00000463875 ECE1P42892 770 aa9.79□□□□□ -0.84
GTDC1-212ENST00000463875 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
GTDC1-212ENST00000463875 PUS7Q96PZ0 661 aaKnown RBP9.79□□□□□ -0.84
GTDC1-212ENST00000463875 MCOLN1Q9GZU1 580 aa9.79□□□□□ -0.84
GTDC1-212ENST00000463875 A0A1W2PP64 1363 aa9.78□□□□□ -0.84
GTDC1-212ENST00000463875 INSRP06213 1382 aa9.78□□□□□ -0.84
GTDC1-212ENST00000463875 KIF24Q5T7B8 1368 aa9.78□□□□□ -0.84
GTDC1-212ENST00000463875 TM4SF1P30408 202 aa9.78□□□□□ -0.84
GTDC1-212ENST00000463875 FKBP8Q14318 412 aa9.78□□□□□ -0.84
GTDC1-212ENST00000463875 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
GTDC1-212ENST00000463875 LTBP3Q9NS15 1303 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms