RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TRAK2O60296 914 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 RNF144AP50876 292 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-204ENST00000463622 ZNF592Q92610 1267 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 ITGA6P23229 1130 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 KRT76Q01546 638 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 POU4F2Q12837 409 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 SLFNL1Q499Z3 407 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 CYP2U1Q7Z449 544 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 RNF135Q8IUD6 432 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 NLRP3Q96P20 1036 aa6.37□□□□□ -1.39
SCFD1-204ENST00000463622 CEP170Q5SW79 1584 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 OXLD1Q5BKU9 147 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 SLC27A3Q5K4L6 730 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 CCDC125Q86Z20 511 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 ZSCAN1Q8NBB4 408 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 CNTNAP3BQ96NU0 1288 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 CNTNAP3Q9BZ76 1288 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 CUEDC1Q9NWM3 386 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-204ENST00000463622 DOLKQ9UPQ8 538 aa6.36□□□□□ -1.39
SCFD1-204ENST00000463622 FHAD1B1AJZ9 1412 aa6.35□□□□□ -1.39
SCFD1-204ENST00000463622 PRG4Q92954 1404 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-204ENST00000463622 MYCP01106 439 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-204ENST00000463622 IL2RAP01589 272 aa6.35□□□□□ -1.39
SCFD1-204ENST00000463622 SEMA3FQ13275 785 aa6.35□□□□□ -1.39
SCFD1-204ENST00000463622 CLN3Q13286 438 aa6.35□□□□□ -1.39
SCFD1-204ENST00000463622 RNFT1Q5M7Z0 435 aa6.35□□□□□ -1.39
SCFD1-204ENST00000463622 CNKSR1Q969H4 720 aa6.35□□□□□ -1.39
SCFD1-204ENST00000463622 COL25A1Q9BXS0 654 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-204ENST00000463622 STK17AQ9UEE5 414 aa6.35□□□□□ -1.39
SCFD1-204ENST00000463622 PIK3CDO00329 1044 aa6.34□□□□□ -1.39
SCFD1-204ENST00000463622 WASHC4Q2M389 1173 aa6.34□□□□□ -1.39
SCFD1-204ENST00000463622 TRIM52Q96A61 297 aa6.34□□□□□ -1.39
SCFD1-204ENST00000463622 NANOS1Q8WY41 292 aaKnown RBP6.33□□□□□ -1.4
SCFD1-204ENST00000463622 GAS2L1Q99501 681 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-204ENST00000463622 GRIP2Q9C0E4 1043 aa6.33□□□□□ -1.4
SCFD1-204ENST00000463622 GPC1P35052 558 aa6.33□□□□□ -1.4
SCFD1-204ENST00000463622 PHKA2P46019 1235 aa6.33□□□□□ -1.4
SCFD1-204ENST00000463622 CENPCQ03188 943 aa6.33□□□□□ -1.4
SCFD1-204ENST00000463622 RIPOR1Q6ZS17 1223 aa6.33□□□□□ -1.4
SCFD1-204ENST00000463622 SV2AQ7L0J3 742 aa6.33□□□□□ -1.4
SCFD1-204ENST00000463622 SHROOM2Q13796 1616 aa6.32□□□□□ -1.4
SCFD1-204ENST00000463622 ABCA5Q8WWZ7 1642 aa6.32□□□□□ -1.4
SCFD1-204ENST00000463622 WRNQ14191 1432 aaPredicted RBP eCLIP6.32□□□□□ -1.4
SCFD1-204ENST00000463622 GNRH1P01148 92 aa6.32□□□□□ -1.4
SCFD1-204ENST00000463622 USP4Q13107 963 aa6.32□□□□□ -1.4
SCFD1-204ENST00000463622 ESYT1Q9BSJ8 1104 aa6.32□□□□□ -1.4
SCFD1-204ENST00000463622 MAPKBP1O60336 1514 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 POM121CA8CG34 1229 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 UBTFP17480 764 aaKnown RBP6.31□□□□□ -1.4
SCFD1-204ENST00000463622 NBPF10Q6P3W6 841 aaKnown RBP6.31□□□□□ -1.4
SCFD1-204ENST00000463622 NBPF15Q8N660 670 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 PLPP7Q8NBV4 271 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 CHIC2Q9UKJ5 165 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 GPR25O00155 361 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 RAD21O60216 631 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 ETNK1Q9HBU6 452 aa6.31□□□□□ -1.4
SCFD1-204ENST00000463622 DBN1Q16643 649 aa6.3□□□□□ -1.4
SCFD1-204ENST00000463622 XAGE2Q96GT9 111 aa6.3□□□□□ -1.4
SCFD1-204ENST00000463622 KIF13AQ9H1H9 1805 aa6.3□□□□□ -1.4
SCFD1-204ENST00000463622 TMEM132AQ24JP5 1023 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 CLUAP1Q96AJ1 413 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 ZSCAN10Q96SZ4 725 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-204ENST00000463622 ALG2Q9H553 416 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 TIMMDC1Q9NPL8 285 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 HRH3Q9Y5N1 445 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 ADAMTS12P58397 1594 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 WASLO00401 505 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-204ENST00000463622 SKIP12755 728 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 FLIIQ13045 1269 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 TAS1R3Q7RTX0 852 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-204ENST00000463622 GPAMQ9HCL2 828 aa6.29□□□□□ -1.4
SCFD1-204ENST00000463622 PBRM1Q86U86 1689 aa6.28□□□□□ -1.4
SCFD1-204ENST00000463622 SPATA31C2B4DYI2 1134 aa6.28□□□□□ -1.4
SCFD1-204ENST00000463622 DEPDC4Q8N2C3 294 aa6.28□□□□□ -1.4
SCFD1-204ENST00000463622 ADAMTS19Q8TE59 1207 aa6.28□□□□□ -1.4
SCFD1-204ENST00000463622 WHAMMQ8TF30 809 aa6.28□□□□□ -1.4
SCFD1-204ENST00000463622 FHDC1Q9C0D6 1143 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-204ENST00000463622 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
SCFD1-204ENST00000463622 ERICH3Q5RHP9 1530 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 SOX11P35716 441 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 SCNN1DP51172 638 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 TMEM214Q6NUQ4 689 aaKnown RBP6.27□□□□□ -1.41
SCFD1-204ENST00000463622 GTPBP3Q969Y2 492 aaKnown RBP6.27□□□□□ -1.41
SCFD1-204ENST00000463622 SERTAD1Q9UHV2 236 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 DIP2BQ9P265 1576 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 FAM181BA6NEQ2 426 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 GDF10P55107 478 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 GAS6Q14393 721 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 TLR1Q15399 786 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 MAP7D1Q3KQU3 841 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 C4orf17Q53FE4 359 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 ESCO1Q5FWF5 840 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 TRIM22Q8IYM9 498 aa6.27□□□□□ -1.41
SCFD1-204ENST00000463622 HDGFL1Q5TGJ6 251 aa6.26□□□□□ -1.41
SCFD1-204ENST00000463622 WWC1Q8IX03 1113 aa6.26□□□□□ -1.41
SCFD1-204ENST00000463622 FBXO41Q8TF61 875 aa6.26□□□□□ -1.41
SCFD1-204ENST00000463622 SIRT1Q96EB6 747 aa6.26□□□□□ -1.41
SCFD1-204ENST00000463622 NCOA4Q13772 614 aa6.25□□□□□ -1.41
SCFD1-204ENST00000463622 COL17A1Q9UMD9 1497 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms