RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 AKAP4Q5JQC9 854 aa27.55■■■□□ 2
PRDM16-204ENST00000463591 KDM6AO15550 1401 aaPredicted RBP27.55■■■□□ 2
PRDM16-204ENST00000463591 SSFA2P28290 1259 aa27.54■■■□□ 2
PRDM16-204ENST00000463591 LINC00116Q8NCU8 138 aa27.54■■■□□ 2
PRDM16-204ENST00000463591 HMOX1P09601 288 aa27.53■■■□□ 2
PRDM16-204ENST00000463591 ITPK1Q13572 414 aa27.53■■■□□ 2
PRDM16-204ENST00000463591 CNGB1Q14028 1251 aaPredicted RBP27.51■■□□□ 1.99
PRDM16-204ENST00000463591 RBM42Q9BTD8 480 aaKnown RBP27.51■■□□□ 1.99
PRDM16-204ENST00000463591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
PRDM16-204ENST00000463591 NFATC2IPQ8NCF5 419 aa27.5■■□□□ 1.99
PRDM16-204ENST00000463591 YY1P25490 414 aa27.49■■□□□ 1.99
PRDM16-204ENST00000463591 ZNF831Q5JPB2 1677 aa27.47■■□□□ 1.99
PRDM16-204ENST00000463591 PHF14O94880 888 aa27.47■■□□□ 1.99
PRDM16-204ENST00000463591 RC3H1Q5TC82 1133 aaKnown RBP27.47■■□□□ 1.99
PRDM16-204ENST00000463591 MSL1Q68DK7 614 aa27.47■■□□□ 1.99
PRDM16-204ENST00000463591 AMIGO3Q86WK7 504 aa27.47■■□□□ 1.99
PRDM16-204ENST00000463591 KLHL34Q8N239 644 aa27.47■■□□□ 1.99
PRDM16-204ENST00000463591 SLC4A9Q96Q91 983 aa27.47■■□□□ 1.99
PRDM16-204ENST00000463591 GNPATO15228 680 aa27.46■■□□□ 1.99
PRDM16-204ENST00000463591 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
PRDM16-204ENST00000463591 UBR3Q6ZT12 1888 aa27.45■■□□□ 1.99
PRDM16-204ENST00000463591 COL3A1P02461 1466 aaPredicted RBP27.44■■□□□ 1.98
PRDM16-204ENST00000463591 U2SURPO15042 1029 aaKnown RBP27.44■■□□□ 1.98
PRDM16-204ENST00000463591 RNMTO43148 476 aaKnown RBP27.44■■□□□ 1.98
PRDM16-204ENST00000463591 MTHFSDQ2M296 383 aaKnown RBP27.44■■□□□ 1.98
PRDM16-204ENST00000463591 SLC52A2Q9HAB3 445 aa27.44■■□□□ 1.98
PRDM16-204ENST00000463591 RTCBQ9Y3I0 505 aaKnown RBP27.44■■□□□ 1.98
PRDM16-204ENST00000463591 LGR6Q9HBX8 967 aa27.43■■□□□ 1.98
PRDM16-204ENST00000463591 SMIM5Q71RC9 77 aa27.42■■□□□ 1.98
PRDM16-204ENST00000463591 CNTNAP4Q9C0A0 1308 aa27.41■■□□□ 1.98
PRDM16-204ENST00000463591 SCN11AQ9UI33 1791 aa27.41■■□□□ 1.98
PRDM16-204ENST00000463591 PTCD1O75127 700 aaKnown RBP27.41■■□□□ 1.98
PRDM16-204ENST00000463591 GPR162Q16538 588 aa27.41■■□□□ 1.98
PRDM16-204ENST00000463591 TRAPPC3LQ5T215 181 aa27.41■■□□□ 1.98
PRDM16-204ENST00000463591 ADRA2BP18089 450 aa27.4■■□□□ 1.98
PRDM16-204ENST00000463591 NUDCQ9Y266 331 aa27.4■■□□□ 1.98
PRDM16-204ENST00000463591 CD2APQ9Y5K6 639 aa27.4■■□□□ 1.98
PRDM16-204ENST00000463591 RPS6KA4O75676 772 aa27.39■■□□□ 1.98
PRDM16-204ENST00000463591 PPP2R1AP30153 589 aa27.38■■□□□ 1.97
PRDM16-204ENST00000463591 NLGN2Q8NFZ4 835 aa27.38■■□□□ 1.97
PRDM16-204ENST00000463591 GAS2L2Q8NHY3 880 aa27.38■■□□□ 1.97
PRDM16-204ENST00000463591 ARHGEF1Q92888 912 aaKnown RBP27.35■■□□□ 1.97
PRDM16-204ENST00000463591 MRC1P22897 1456 aa27.35■■□□□ 1.97
PRDM16-204ENST00000463591 NLGN1Q8N2Q7 840 aa27.34■■□□□ 1.97
PRDM16-204ENST00000463591 COL5A3P25940 1745 aaPredicted RBP27.33■■□□□ 1.97
PRDM16-204ENST00000463591 GNAT3A8MTJ3 354 aa27.33■■□□□ 1.97
PRDM16-204ENST00000463591 CRKLP46109 303 aaKnown RBP27.33■■□□□ 1.97
PRDM16-204ENST00000463591 RFC4P35249 363 aa27.32■■□□□ 1.96
PRDM16-204ENST00000463591 ADAMTS7Q9UKP4 1686 aa27.32■■□□□ 1.96
PRDM16-204ENST00000463591 PELP1Q8IZL8 1130 aaKnown RBP27.31■■□□□ 1.96
PRDM16-204ENST00000463591 GRIN3BO60391 1043 aa27.3■■□□□ 1.96
PRDM16-204ENST00000463591 SLC39A6Q13433 755 aa27.3■■□□□ 1.96
PRDM16-204ENST00000463591 RSPH6AQ9H0K4 717 aa27.3■■□□□ 1.96
PRDM16-204ENST00000463591 PRKAR2BP31323 418 aa27.29■■□□□ 1.96
PRDM16-204ENST00000463591 VSIG10Q8N0Z9 540 aa27.29■■□□□ 1.96
PRDM16-204ENST00000463591 CICQ96RK0 1608 aaPredicted RBP27.29■■□□□ 1.96
PRDM16-204ENST00000463591 FCHSD2O94868 740 aa27.28■■□□□ 1.96
PRDM16-204ENST00000463591 MMP10P09238 476 aa27.28■■□□□ 1.96
PRDM16-204ENST00000463591 U2AF1L5P0DN76 240 aaPredicted RBP27.28■■□□□ 1.96
PRDM16-204ENST00000463591 U2AF1Q01081 240 aaKnown RBP eCLIP27.28■■□□□ 1.96
PRDM16-204ENST00000463591 TEFQ10587 303 aa27.28■■□□□ 1.96
PRDM16-204ENST00000463591 IL17REQ8NFR9 667 aa27.28■■□□□ 1.96
PRDM16-204ENST00000463591 GYS1P13807 737 aa27.27■■□□□ 1.96
PRDM16-204ENST00000463591 DNAJC10Q8IXB1 793 aa27.27■■□□□ 1.96
PRDM16-204ENST00000463591 PHACTR3Q96KR7 559 aa27.27■■□□□ 1.96
PRDM16-204ENST00000463591 MYH14Q7Z406 1995 aaKnown RBP27.26■■□□□ 1.95
PRDM16-204ENST00000463591 INTS5Q6P9B9 1019 aaKnown RBP27.26■■□□□ 1.95
PRDM16-204ENST00000463591 CCDC87Q9NVE4 849 aa27.26■■□□□ 1.95
PRDM16-204ENST00000463591 CHD4Q14839 1912 aa27.25■■□□□ 1.95
PRDM16-204ENST00000463591 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
PRDM16-204ENST00000463591 TJP1Q07157 1748 aa27.24■■□□□ 1.95
PRDM16-204ENST00000463591 CYP19A1P11511 503 aaPredicted RBP27.24■■□□□ 1.95
PRDM16-204ENST00000463591 TTC5Q8N0Z6 440 aa27.24■■□□□ 1.95
PRDM16-204ENST00000463591 KCPQ6ZWJ8 1503 aa27.22■■□□□ 1.95
PRDM16-204ENST00000463591 YBX3P16989 372 aaKnown RBP eCLIP27.22■■□□□ 1.95
PRDM16-204ENST00000463591 PARP3Q9Y6F1 533 aa27.21■■□□□ 1.95
PRDM16-204ENST00000463591 CEMIPQ8WUJ3 1361 aa27.21■■□□□ 1.95
PRDM16-204ENST00000463591 USP42Q9H9J4 1324 aaKnown RBP27.2■■□□□ 1.95
PRDM16-204ENST00000463591 ZNF790Q6PG37 636 aa27.2■■□□□ 1.94
PRDM16-204ENST00000463591 TEX13AQ9BXU3 409 aaPredicted RBP27.2■■□□□ 1.94
PRDM16-204ENST00000463591 SOS1Q07889 1333 aaPredicted RBP27.18■■□□□ 1.94
PRDM16-204ENST00000463591 STARD3NLO95772 234 aa27.18■■□□□ 1.94
PRDM16-204ENST00000463591 TGFB2P61812 414 aa27.18■■□□□ 1.94
PRDM16-204ENST00000463591 ZNF784Q8NCA9 323 aaPredicted RBP27.18■■□□□ 1.94
PRDM16-204ENST00000463591 RTF1Q92541 710 aaKnown RBP27.18■■□□□ 1.94
PRDM16-204ENST00000463591 UTRNP46939 3433 aa27.17■■□□□ 1.94
PRDM16-204ENST00000463591 HTATSF1O43719 755 aaKnown RBP27.17■■□□□ 1.94
PRDM16-204ENST00000463591 ZPR1O75312 459 aa27.17■■□□□ 1.94
PRDM16-204ENST00000463591 NEFMP07197 916 aa27.16■■□□□ 1.94
PRDM16-204ENST00000463591 ZNF496Q96IT1 587 aaPredicted RBP27.16■■□□□ 1.94
PRDM16-204ENST00000463591 SRP68Q9UHB9 627 aaKnown RBP27.16■■□□□ 1.94
PRDM16-204ENST00000463591 UBR2Q8IWV8 1755 aa27.15■■□□□ 1.94
PRDM16-204ENST00000463591 C4AP0C0L4 1744 aa27.15■■□□□ 1.94
PRDM16-204ENST00000463591 HEG1Q9ULI3 1381 aa27.14■■□□□ 1.94
PRDM16-204ENST00000463591 BTBD11A6QL63 1104 aa27.14■■□□□ 1.94
PRDM16-204ENST00000463591 FKBP8Q14318 412 aa27.14■■□□□ 1.94
PRDM16-204ENST00000463591 RALBP1Q15311 655 aa27.14■■□□□ 1.94
PRDM16-204ENST00000463591 FMNL2Q96PY5 1086 aa27.14■■□□□ 1.94
PRDM16-204ENST00000463591 ZBTB1Q9Y2K1 713 aa27.14■■□□□ 1.94
PRDM16-204ENST00000463591 PNNQ9H307 717 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms