RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 NPM2Q86SE8 214 aaKnown RBP9.54□□□□□ -0.88
EPHA4-210ENST00000463446 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
EPHA4-210ENST00000463446 RGPD5Q99666 1765 aa9.54□□□□□ -0.88
EPHA4-210ENST00000463446 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.53□□□□□ -0.88
EPHA4-210ENST00000463446 LRP6O75581 1613 aa9.53□□□□□ -0.88
EPHA4-210ENST00000463446 IPO8O15397 1037 aaKnown RBP9.53□□□□□ -0.88
EPHA4-210ENST00000463446 CCDC125Q86Z20 511 aa9.53□□□□□ -0.88
EPHA4-210ENST00000463446 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
EPHA4-210ENST00000463446 FMNL2Q96PY5 1086 aa9.53□□□□□ -0.88
EPHA4-210ENST00000463446 LGR6Q9HBX8 967 aa9.53□□□□□ -0.88
EPHA4-210ENST00000463446 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
EPHA4-210ENST00000463446 PLCH1Q4KWH8 1693 aa9.52□□□□□ -0.89
EPHA4-210ENST00000463446 DISP2A7MBM2 1401 aa9.52□□□□□ -0.89
EPHA4-210ENST00000463446 BCL9O00512 1426 aa9.52□□□□□ -0.89
EPHA4-210ENST00000463446 CCDC30Q5VVM6 783 aa9.52□□□□□ -0.89
EPHA4-210ENST00000463446 ZNF790Q6PG37 636 aa9.52□□□□□ -0.89
EPHA4-210ENST00000463446 CHMP4BQ9H444 224 aaKnown RBP9.52□□□□□ -0.89
EPHA4-210ENST00000463446 STARD3NLO95772 234 aa9.51□□□□□ -0.89
EPHA4-210ENST00000463446 SNRPA1P09661 255 aaKnown RBP9.51□□□□□ -0.89
EPHA4-210ENST00000463446 ALDH1L2Q3SY69 923 aa9.51□□□□□ -0.89
EPHA4-210ENST00000463446 DUSP27Q5VZP5 1158 aa9.51□□□□□ -0.89
EPHA4-210ENST00000463446 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
EPHA4-210ENST00000463446 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
EPHA4-210ENST00000463446 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
EPHA4-210ENST00000463446 TNS2Q63HR2 1409 aa9.5□□□□□ -0.89
EPHA4-210ENST00000463446 PRIM1P49642 420 aaKnown RBP9.5□□□□□ -0.89
EPHA4-210ENST00000463446 SF3B2Q13435 895 aaKnown RBP9.5□□□□□ -0.89
EPHA4-210ENST00000463446 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
EPHA4-210ENST00000463446 MARCH10Q8NA82 808 aaPredicted RBP9.5□□□□□ -0.89
EPHA4-210ENST00000463446 MBIPQ9NS73 344 aa9.5□□□□□ -0.89
EPHA4-210ENST00000463446 RCAN3Q9UKA8 241 aa9.5□□□□□ -0.89
EPHA4-210ENST00000463446 MEGF6O75095 1541 aa9.5□□□□□ -0.89
EPHA4-210ENST00000463446 TWISTNBQ3B726 338 aaPredicted RBP9.49□□□□□ -0.89
EPHA4-210ENST00000463446 NRAPQ86VF7 1730 aa9.48□□□□□ -0.89
EPHA4-210ENST00000463446 NEFLP07196 543 aa9.48□□□□□ -0.89
EPHA4-210ENST00000463446 BRPF1P55201 1214 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-210ENST00000463446 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
EPHA4-210ENST00000463446 EXOSC9Q06265 439 aaKnown RBP9.48□□□□□ -0.89
EPHA4-210ENST00000463446 ARHGAP45Q92619 1136 aa9.48□□□□□ -0.89
EPHA4-210ENST00000463446 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
EPHA4-210ENST00000463446 DBF4Q9UBU7 674 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-210ENST00000463446 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
EPHA4-210ENST00000463446 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
EPHA4-210ENST00000463446 VAMP4O75379 141 aa9.47□□□□□ -0.89
EPHA4-210ENST00000463446 GIGYF1O75420 1035 aaPredicted RBP9.47□□□□□ -0.89
EPHA4-210ENST00000463446 DDX58O95786 925 aaKnown RBP9.47□□□□□ -0.89
EPHA4-210ENST00000463446 AAMPQ13685 434 aa9.47□□□□□ -0.89
EPHA4-210ENST00000463446 PIGBQ92521 554 aa9.47□□□□□ -0.89
EPHA4-210ENST00000463446 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
EPHA4-210ENST00000463446 HYPKQ9NX55 129 aa9.47□□□□□ -0.89
EPHA4-210ENST00000463446 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
EPHA4-210ENST00000463446 RGPD2P0DJD1 1756 aa9.47□□□□□ -0.89
EPHA4-210ENST00000463446 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.89
EPHA4-210ENST00000463446 PLSCR1O15162 318 aa9.46□□□□□ -0.9
EPHA4-210ENST00000463446 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
EPHA4-210ENST00000463446 SLC27A3Q5K4L6 730 aa9.46□□□□□ -0.9
EPHA4-210ENST00000463446 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.9
EPHA4-210ENST00000463446 KIF16BQ96L93 1317 aa9.46□□□□□ -0.9
EPHA4-210ENST00000463446 HDGFL1Q5TGJ6 251 aa9.45□□□□□ -0.9
EPHA4-210ENST00000463446 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
EPHA4-210ENST00000463446 TSR2Q969E8 191 aaKnown RBP9.45□□□□□ -0.9
EPHA4-210ENST00000463446 RBM42Q9BTD8 480 aaKnown RBP9.45□□□□□ -0.9
EPHA4-210ENST00000463446 ATG3Q9NT62 314 aa9.45□□□□□ -0.9
EPHA4-210ENST00000463446 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
EPHA4-210ENST00000463446 RGS17Q9UGC6 210 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-210ENST00000463446 RARSP54136 660 aaKnown RBP9.44□□□□□ -0.9
EPHA4-210ENST00000463446 ACSBG1Q96GR2 724 aa9.44□□□□□ -0.9
EPHA4-210ENST00000463446 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
EPHA4-210ENST00000463446 PTPRCP08575 1304 aa9.44□□□□□ -0.9
EPHA4-210ENST00000463446 KDM6AO15550 1401 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-210ENST00000463446 HEG1Q9ULI3 1381 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 A0A087WZG4 1122 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 ELL2O00472 640 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-210ENST00000463446 PTCD1O75127 700 aaKnown RBP9.43□□□□□ -0.9
EPHA4-210ENST00000463446 SLC4A2P04920 1241 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 ATP6V1AP38606 617 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 PDE3AQ14432 1141 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
EPHA4-210ENST00000463446 ZKSCAN2Q63HK3 967 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 C8orf58Q8NAV2 365 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 ZNF496Q96IT1 587 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-210ENST00000463446 SPINK5Q9NQ38 1064 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-210ENST00000463446 DDX21Q9NR30 783 aaKnown RBP eCLIP9.43□□□□□ -0.9
EPHA4-210ENST00000463446 SMC4Q9NTJ3 1288 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 ASAP1Q9ULH1 1129 aa9.43□□□□□ -0.9
EPHA4-210ENST00000463446 SENP3-EIF4A1A0A087X0R7 540 aa9.42□□□□□ -0.9
EPHA4-210ENST00000463446 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
EPHA4-210ENST00000463446 RGL2O15211 777 aa9.42□□□□□ -0.9
EPHA4-210ENST00000463446 EIF2S2P20042 333 aaKnown RBP9.42□□□□□ -0.9
EPHA4-210ENST00000463446 SIK1P57059 783 aa9.42□□□□□ -0.9
EPHA4-210ENST00000463446 SLC39A6Q13433 755 aa9.42□□□□□ -0.9
EPHA4-210ENST00000463446 FLAD1Q8NFF5 587 aa9.42□□□□□ -0.9
EPHA4-210ENST00000463446 GLI3P10071 1580 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 DLG5Q8TDM6 1919 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 TRIM37O94972 964 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 APBA3O96018 575 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
EPHA4-210ENST00000463446 BAG6P46379 1132 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 NEXNQ0ZGT2 675 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 FTSJ3Q8IY81 847 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms