RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
LINC00879-202ENST00000463200 ASAP1Q9ULH1 1129 aa16.29■□□□□ 0.2
LINC00879-202ENST00000463200 PNPLA7Q6ZV29 1317 aa16.28■□□□□ 0.2
LINC00879-202ENST00000463200 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
LINC00879-202ENST00000463200 TUBGCP6Q96RT7 1819 aa16.28■□□□□ 0.2
LINC00879-202ENST00000463200 SCN11AQ9UI33 1791 aa16.28■□□□□ 0.2
LINC00879-202ENST00000463200 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
LINC00879-202ENST00000463200 U2AF1L5P0DN76 240 aaPredicted RBP16.27■□□□□ 0.2
LINC00879-202ENST00000463200 U2AF1Q01081 240 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC00879-202ENST00000463200 ARXQ96QS3 562 aa16.27■□□□□ 0.2
LINC00879-202ENST00000463200 COL3A1P02461 1466 aaPredicted RBP16.27■□□□□ 0.19
LINC00879-202ENST00000463200 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
LINC00879-202ENST00000463200 NFATC2IPQ8NCF5 419 aa16.26■□□□□ 0.19
LINC00879-202ENST00000463200 KDM6AO15550 1401 aaPredicted RBP16.26■□□□□ 0.19
LINC00879-202ENST00000463200 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
LINC00879-202ENST00000463200 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
LINC00879-202ENST00000463200 PHF14O94880 888 aa16.24■□□□□ 0.19
LINC00879-202ENST00000463200 PTGER2P43116 358 aa16.24■□□□□ 0.19
LINC00879-202ENST00000463200 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
LINC00879-202ENST00000463200 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
LINC00879-202ENST00000463200 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
LINC00879-202ENST00000463200 GNPATO15228 680 aa16.23■□□□□ 0.19
LINC00879-202ENST00000463200 RNMTO43148 476 aaKnown RBP16.23■□□□□ 0.19
LINC00879-202ENST00000463200 SSFA2P28290 1259 aa16.23■□□□□ 0.19
LINC00879-202ENST00000463200 PRKAR2BP31323 418 aa16.23■□□□□ 0.19
LINC00879-202ENST00000463200 TEFQ10587 303 aa16.23■□□□□ 0.19
LINC00879-202ENST00000463200 RALBP1Q15311 655 aa16.23■□□□□ 0.19
LINC00879-202ENST00000463200 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
LINC00879-202ENST00000463200 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
LINC00879-202ENST00000463200 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
LINC00879-202ENST00000463200 PTCD1O75127 700 aaKnown RBP16.22■□□□□ 0.19
LINC00879-202ENST00000463200 FCHSD2O94868 740 aa16.22■□□□□ 0.19
LINC00879-202ENST00000463200 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
LINC00879-202ENST00000463200 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
LINC00879-202ENST00000463200 RTCBQ9Y3I0 505 aaKnown RBP16.22■□□□□ 0.19
LINC00879-202ENST00000463200 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
LINC00879-202ENST00000463200 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
LINC00879-202ENST00000463200 UBR3Q6ZT12 1888 aa16.2■□□□□ 0.18
LINC00879-202ENST00000463200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.2■□□□□ 0.18
LINC00879-202ENST00000463200 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
LINC00879-202ENST00000463200 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
LINC00879-202ENST00000463200 ITPK1Q13572 414 aa16.19■□□□□ 0.18
LINC00879-202ENST00000463200 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
LINC00879-202ENST00000463200 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
LINC00879-202ENST00000463200 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
LINC00879-202ENST00000463200 MRC1P22897 1456 aa16.18■□□□□ 0.18
LINC00879-202ENST00000463200 RC3H1Q5TC82 1133 aaKnown RBP16.18■□□□□ 0.18
LINC00879-202ENST00000463200 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
LINC00879-202ENST00000463200 SYT17Q9BSW7 474 aa16.18■□□□□ 0.18
LINC00879-202ENST00000463200 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
LINC00879-202ENST00000463200 COL5A3P25940 1745 aaPredicted RBP16.17■□□□□ 0.18
LINC00879-202ENST00000463200 COL24A1Q17RW2 1714 aa16.17■□□□□ 0.18
LINC00879-202ENST00000463200 RFC4P35249 363 aa16.17■□□□□ 0.18
LINC00879-202ENST00000463200 MAPK8IP3Q9UPT6 1336 aa16.17■□□□□ 0.18
LINC00879-202ENST00000463200 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
LINC00879-202ENST00000463200 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
LINC00879-202ENST00000463200 RPS6KA4O75676 772 aa16.14■□□□□ 0.17
LINC00879-202ENST00000463200 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
LINC00879-202ENST00000463200 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
LINC00879-202ENST00000463200 VSIG10Q8N0Z9 540 aa16.14■□□□□ 0.17
LINC00879-202ENST00000463200 PHACTR3Q96KR7 559 aa16.14■□□□□ 0.17
LINC00879-202ENST00000463200 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
LINC00879-202ENST00000463200 STARD3NLO95772 234 aa16.13■□□□□ 0.17
LINC00879-202ENST00000463200 CRKLP46109 303 aaKnown RBP16.13■□□□□ 0.17
LINC00879-202ENST00000463200 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
LINC00879-202ENST00000463200 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
LINC00879-202ENST00000463200 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
LINC00879-202ENST00000463200 CICQ96RK0 1608 aaPredicted RBP16.12■□□□□ 0.17
LINC00879-202ENST00000463200 TJP1Q07157 1748 aa16.12■□□□□ 0.17
LINC00879-202ENST00000463200 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
LINC00879-202ENST00000463200 GPR162Q16538 588 aa16.12■□□□□ 0.17
LINC00879-202ENST00000463200 PELP1Q8IZL8 1130 aaKnown RBP16.12■□□□□ 0.17
LINC00879-202ENST00000463200 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
LINC00879-202ENST00000463200 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC00879-202ENST00000463200 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
LINC00879-202ENST00000463200 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
LINC00879-202ENST00000463200 ARHGEF1Q92888 912 aaKnown RBP16.11■□□□□ 0.17
LINC00879-202ENST00000463200 FMNL2Q96PY5 1086 aa16.11■□□□□ 0.17
LINC00879-202ENST00000463200 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
LINC00879-202ENST00000463200 ZPR1O75312 459 aa16.1■□□□□ 0.17
LINC00879-202ENST00000463200 CD2APQ9Y5K6 639 aa16.1■□□□□ 0.17
LINC00879-202ENST00000463200 SIPA1L3O60292 1781 aaPredicted RBP16.1■□□□□ 0.17
LINC00879-202ENST00000463200 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
LINC00879-202ENST00000463200 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
LINC00879-202ENST00000463200 CEMIPQ8WUJ3 1361 aa16.09■□□□□ 0.17
LINC00879-202ENST00000463200 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
LINC00879-202ENST00000463200 MYH14Q7Z406 1995 aaKnown RBP16.08■□□□□ 0.16
LINC00879-202ENST00000463200 MCM10Q7L590 875 aa16.08■□□□□ 0.16
LINC00879-202ENST00000463200 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
LINC00879-202ENST00000463200 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.16
LINC00879-202ENST00000463200 MMP10P09238 476 aa16.07■□□□□ 0.16
LINC00879-202ENST00000463200 CYP19A1P11511 503 aaPredicted RBP16.07■□□□□ 0.16
LINC00879-202ENST00000463200 YY1P25490 414 aa16.07■□□□□ 0.16
LINC00879-202ENST00000463200 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
LINC00879-202ENST00000463200 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
LINC00879-202ENST00000463200 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
LINC00879-202ENST00000463200 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
LINC00879-202ENST00000463200 A0A087WZG4 1122 aa16.06■□□□□ 0.16
LINC00879-202ENST00000463200 LMOD3Q0VAK6 560 aa16.06■□□□□ 0.16
LINC00879-202ENST00000463200 NFE2L2Q16236 605 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms