RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 CC2D2BQ6DHV5 1058 aa8.9□□□□□ -0.98
COPS3-205ENST00000463097 C16orf46Q6P387 395 aa8.9□□□□□ -0.98
COPS3-205ENST00000463097 PUS7Q96PZ0 661 aaKnown RBP8.9□□□□□ -0.98
COPS3-205ENST00000463097 CITED4Q96RK1 184 aa8.9□□□□□ -0.98
COPS3-205ENST00000463097 ERCC5P28715 1186 aaPredicted RBP8.89□□□□□ -0.99
COPS3-205ENST00000463097 EPHA4P54764 986 aa8.89□□□□□ -0.99
COPS3-205ENST00000463097 FMR1Q06787 632 aaKnown RBP eCLIP8.89□□□□□ -0.99
COPS3-205ENST00000463097 VASH1Q7L8A9 365 aaPredicted RBP8.89□□□□□ -0.99
COPS3-205ENST00000463097 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
COPS3-205ENST00000463097 CHMP7Q8WUX9 453 aaPredicted RBP8.89□□□□□ -0.99
COPS3-205ENST00000463097 SAP130Q9H0E3 1048 aa8.89□□□□□ -0.99
COPS3-205ENST00000463097 TSPAN10Q9H1Z9 355 aaPredicted RBP8.89□□□□□ -0.99
COPS3-205ENST00000463097 MAP4K5Q9Y4K4 846 aa8.89□□□□□ -0.99
COPS3-205ENST00000463097 SCAMP3O14828 347 aaKnown RBP8.88□□□□□ -0.99
COPS3-205ENST00000463097 STAU1O95793 577 aaKnown RBP8.88□□□□□ -0.99
COPS3-205ENST00000463097 HSP90B1P14625 803 aaKnown RBP8.88□□□□□ -0.99
COPS3-205ENST00000463097 FGD1P98174 961 aa8.88□□□□□ -0.99
COPS3-205ENST00000463097 PLCB3Q01970 1234 aa8.88□□□□□ -0.99
COPS3-205ENST00000463097 FAM177A1Q8N128 213 aaPredicted RBP8.88□□□□□ -0.99
COPS3-205ENST00000463097 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
COPS3-205ENST00000463097 OSBPL3Q9H4L5 887 aa8.88□□□□□ -0.99
COPS3-205ENST00000463097 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
COPS3-205ENST00000463097 INHAP05111 366 aa8.87□□□□□ -0.99
COPS3-205ENST00000463097 VARSP26640 1264 aaKnown RBP8.87□□□□□ -0.99
COPS3-205ENST00000463097 HDLBPQ00341 1268 aaKnown RBP8.87□□□□□ -0.99
COPS3-205ENST00000463097 DSC3Q14574 896 aa8.87□□□□□ -0.99
COPS3-205ENST00000463097 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
COPS3-205ENST00000463097 ALKBH2Q6NS38 261 aa8.87□□□□□ -0.99
COPS3-205ENST00000463097 TRIM52Q96A61 297 aa8.87□□□□□ -0.99
COPS3-205ENST00000463097 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
COPS3-205ENST00000463097 PPP1R12BO60237 982 aaPredicted RBP8.86□□□□□ -0.99
COPS3-205ENST00000463097 EIF1AXP47813 144 aaKnown RBP8.86□□□□□ -0.99
COPS3-205ENST00000463097 XPCQ01831 940 aaPredicted RBP8.86□□□□□ -0.99
COPS3-205ENST00000463097 AAMPQ13685 434 aa8.86□□□□□ -0.99
COPS3-205ENST00000463097 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
COPS3-205ENST00000463097 KCTD12Q96CX2 325 aaKnown RBP8.86□□□□□ -0.99
COPS3-205ENST00000463097 DMRTB1Q96MA1 342 aa8.86□□□□□ -0.99
COPS3-205ENST00000463097 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
COPS3-205ENST00000463097 PRKD2Q9BZL6 878 aa8.86□□□□□ -0.99
COPS3-205ENST00000463097 CCDC87Q9NVE4 849 aa8.86□□□□□ -0.99
COPS3-205ENST00000463097 ZBTB24O43167 697 aaPredicted RBP8.85□□□□□ -0.99
COPS3-205ENST00000463097 FZD6O60353 706 aa8.85□□□□□ -0.99
COPS3-205ENST00000463097 LDHBP07195 334 aaKnown RBP8.85□□□□□ -0.99
COPS3-205ENST00000463097 LDLRAD1Q5T700 205 aa8.85□□□□□ -0.99
COPS3-205ENST00000463097 C9orf131Q5VYM1 1079 aa8.85□□□□□ -0.99
COPS3-205ENST00000463097 ETNK1Q9HBU6 452 aa8.85□□□□□ -0.99
COPS3-205ENST00000463097 CYLDQ9NQC7 956 aa8.85□□□□□ -0.99
COPS3-205ENST00000463097 STIM2Q9P246 746 aa8.85□□□□□ -0.99
COPS3-205ENST00000463097 PPP1R1BQ9UD71 204 aaPredicted RBP8.85□□□□□ -0.99
COPS3-205ENST00000463097 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
COPS3-205ENST00000463097 MAPK8P45983 427 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 FOXK2Q01167 660 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 EHHADHQ08426 723 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 COX20Q5RI15 118 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 STAG2Q8N3U4 1231 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 UBXN4Q92575 508 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 TMPRSS4Q9NRS4 437 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 PARP2Q9UGN5 583 aa8.84□□□□□ -0.99
COPS3-205ENST00000463097 TNFRSF10BO14763 440 aa8.83□□□□□ -1
COPS3-205ENST00000463097 ITGAEP38570 1179 aa8.83□□□□□ -1
COPS3-205ENST00000463097 DHX9Q08211 1270 aaKnown RBP8.83□□□□□ -1
COPS3-205ENST00000463097 TMEM87AQ8NBN3 555 aa8.83□□□□□ -1
COPS3-205ENST00000463097 DUSP9Q99956 384 aaKnown RBP8.83□□□□□ -1
COPS3-205ENST00000463097 C2orf49Q9BVC5 232 aaPredicted RBP8.83□□□□□ -1
COPS3-205ENST00000463097 MRS2Q9HD23 443 aa8.83□□□□□ -1
COPS3-205ENST00000463097 IGHA2P01877 340 aa8.82□□□□□ -1
COPS3-205ENST00000463097 WNT7BP56706 349 aa8.82□□□□□ -1
COPS3-205ENST00000463097 TRIM32Q13049 653 aa8.82□□□□□ -1
COPS3-205ENST00000463097 PDE3BQ13370 1112 aa8.82□□□□□ -1
COPS3-205ENST00000463097 ESCO1Q5FWF5 840 aa8.82□□□□□ -1
COPS3-205ENST00000463097 LHX8Q68G74 356 aa8.82□□□□□ -1
COPS3-205ENST00000463097 TMC4Q7Z404 712 aa8.82□□□□□ -1
COPS3-205ENST00000463097 SLC9A9Q8IVB4 645 aa8.82□□□□□ -1
COPS3-205ENST00000463097 FAM161BQ96MY7 647 aa8.82□□□□□ -1
COPS3-205ENST00000463097 FAM129BQ96TA1 746 aa8.82□□□□□ -1
COPS3-205ENST00000463097 SCHIP1Q9P0W5 487 aaPredicted RBP8.82□□□□□ -1
COPS3-205ENST00000463097 A6NJY4 79 aa8.81□□□□□ -1
COPS3-205ENST00000463097 GNRH1P01148 92 aa8.81□□□□□ -1
COPS3-205ENST00000463097 SKOR1P84550 965 aa8.81□□□□□ -1
COPS3-205ENST00000463097 DAB2P98082 770 aa8.81□□□□□ -1
COPS3-205ENST00000463097 ARID5BQ14865 1188 aa8.81□□□□□ -1
COPS3-205ENST00000463097 TBCELQ5QJ74 424 aa8.81□□□□□ -1
COPS3-205ENST00000463097 CYP2U1Q7Z449 544 aa8.81□□□□□ -1
COPS3-205ENST00000463097 PIK3R5Q8WYR1 880 aa8.81□□□□□ -1
COPS3-205ENST00000463097 PPEF1O14829 653 aaPredicted RBP8.8□□□□□ -1
COPS3-205ENST00000463097 GPR182O15218 404 aa8.8□□□□□ -1
COPS3-205ENST00000463097 SORBS3O60504 671 aa8.8□□□□□ -1
COPS3-205ENST00000463097 SMTNP53814 917 aa8.8□□□□□ -1
COPS3-205ENST00000463097 PSMA6P60900 246 aaKnown RBP8.8□□□□□ -1
COPS3-205ENST00000463097 RAD51AP2Q09MP3 1159 aa8.8□□□□□ -1
COPS3-205ENST00000463097 ABTB2Q8N961 1025 aa8.8□□□□□ -1
COPS3-205ENST00000463097 ZNF784Q8NCA9 323 aaPredicted RBP8.8□□□□□ -1
COPS3-205ENST00000463097 ALKBH8Q96BT7 664 aaKnown RBP8.8□□□□□ -1
COPS3-205ENST00000463097 CDK15Q96Q40 435 aa8.8□□□□□ -1
COPS3-205ENST00000463097 QTRT2Q9H974 415 aaKnown RBP8.8□□□□□ -1
COPS3-205ENST00000463097 POTEMA6NI47 508 aa8.79□□□□□ -1
COPS3-205ENST00000463097 FSHRP23945 695 aa8.79□□□□□ -1
COPS3-205ENST00000463097 GRM5P41594 1212 aa8.79□□□□□ -1
COPS3-205ENST00000463097 PTPN5P54829 565 aa8.79□□□□□ -1
COPS3-205ENST00000463097 MYT1Q01538 1121 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms