RNA–Protein interactions for RNA: ENST00000463083.1

SMIM29-204, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 1,487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-204ENST00000463083 MIS18AQ9NYP9 233 aa23.51■■□□□ 1.35
SMIM29-204ENST00000463083 GNAI1P63096 354 aa23.5■■□□□ 1.35
SMIM29-204ENST00000463083 CFAP44Q96MT7 982 aa23.5■■□□□ 1.35
SMIM29-204ENST00000463083 TMOD3Q9NYL9 352 aa23.5■■□□□ 1.35
SMIM29-204ENST00000463083 E9PSI1 815 aa23.49■■□□□ 1.35
SMIM29-204ENST00000463083 BTBD11A6QL63 1104 aa23.49■■□□□ 1.35
SMIM29-204ENST00000463083 SLFN5Q08AF3 891 aa23.49■■□□□ 1.35
SMIM29-204ENST00000463083 FAM196AQ6ZSG2 479 aa23.49■■□□□ 1.35
SMIM29-204ENST00000463083 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
SMIM29-204ENST00000463083 TSPYL4Q9UJ04 414 aa23.49■■□□□ 1.35
SMIM29-204ENST00000463083 MRC1P22897 1456 aa23.48■■□□□ 1.35
SMIM29-204ENST00000463083 TSR2Q969E8 191 aaKnown RBP23.48■■□□□ 1.35
SMIM29-204ENST00000463083 ITGB4P16144 1822 aa23.47■■□□□ 1.35
SMIM29-204ENST00000463083 CHL1O00533 1208 aa23.47■■□□□ 1.35
SMIM29-204ENST00000463083 ZNF853P0CG23 659 aa23.47■■□□□ 1.35
SMIM29-204ENST00000463083 MBIPQ9NS73 344 aa23.47■■□□□ 1.35
SMIM29-204ENST00000463083 KCNQ2O43526 872 aa23.46■■□□□ 1.35
SMIM29-204ENST00000463083 PIGBQ92521 554 aa23.46■■□□□ 1.35
SMIM29-204ENST00000463083 SIPA1L3O60292 1781 aaPredicted RBP23.46■■□□□ 1.35
SMIM29-204ENST00000463083 BCL9O00512 1426 aa23.46■■□□□ 1.35
SMIM29-204ENST00000463083 FANCIQ9NVI1 1328 aa23.45■■□□□ 1.34
SMIM29-204ENST00000463083 SLC39A6Q13433 755 aa23.44■■□□□ 1.34
SMIM29-204ENST00000463083 BABAM1Q9NWV8 329 aa23.43■■□□□ 1.34
SMIM29-204ENST00000463083 KCNQ3O43525 872 aa23.42■■□□□ 1.34
SMIM29-204ENST00000463083 TTC5Q8N0Z6 440 aa23.42■■□□□ 1.34
SMIM29-204ENST00000463083 SBF2Q86WG5 1849 aa23.41■■□□□ 1.34
SMIM29-204ENST00000463083 DUSP27Q5VZP5 1158 aa23.41■■□□□ 1.34
SMIM29-204ENST00000463083 ZNF790Q6PG37 636 aa23.41■■□□□ 1.34
SMIM29-204ENST00000463083 PTF1AQ7RTS3 328 aa23.41■■□□□ 1.34
SMIM29-204ENST00000463083 TRIM37O94972 964 aa23.4■■□□□ 1.34
SMIM29-204ENST00000463083 TRMT2AQ8IZ69 625 aaKnown RBP23.4■■□□□ 1.34
SMIM29-204ENST00000463083 ASAP1Q9ULH1 1129 aa23.4■■□□□ 1.34
SMIM29-204ENST00000463083 NHSQ6T4R5 1651 aa23.4■■□□□ 1.34
SMIM29-204ENST00000463083 KDM3BQ7LBC6 1761 aa23.39■■□□□ 1.33
SMIM29-204ENST00000463083 ATG3Q9NT62 314 aa23.38■■□□□ 1.33
SMIM29-204ENST00000463083 EXOSC9Q06265 439 aaKnown RBP23.37■■□□□ 1.33
SMIM29-204ENST00000463083 BCL11BQ9C0K0 894 aaPredicted RBP23.37■■□□□ 1.33
SMIM29-204ENST00000463083 PTCD1O75127 700 aaKnown RBP23.36■■□□□ 1.33
SMIM29-204ENST00000463083 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
SMIM29-204ENST00000463083 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
SMIM29-204ENST00000463083 ELL2O00472 640 aaPredicted RBP23.35■■□□□ 1.33
SMIM29-204ENST00000463083 ZNF496Q96IT1 587 aaPredicted RBP23.35■■□□□ 1.33
SMIM29-204ENST00000463083 BTAF1O14981 1849 aa23.35■■□□□ 1.33
SMIM29-204ENST00000463083 EP400Q96L91 3159 aa23.34■■□□□ 1.33
SMIM29-204ENST00000463083 C8orf58Q8NAV2 365 aa23.34■■□□□ 1.33
SMIM29-204ENST00000463083 FMNL2Q96PY5 1086 aa23.34■■□□□ 1.33
SMIM29-204ENST00000463083 PAPPAQ13219 1627 aa23.34■■□□□ 1.33
SMIM29-204ENST00000463083 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
SMIM29-204ENST00000463083 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.33
SMIM29-204ENST00000463083 PALLDQ8WX93 1383 aa23.32■■□□□ 1.32
SMIM29-204ENST00000463083 TSPYL6Q8N831 410 aa23.32■■□□□ 1.32
SMIM29-204ENST00000463083 TWISTNBQ3B726 338 aaPredicted RBP23.3■■□□□ 1.32
SMIM29-204ENST00000463083 UBR2Q8IWV8 1755 aa23.3■■□□□ 1.32
SMIM29-204ENST00000463083 KCPQ6ZWJ8 1503 aa23.3■■□□□ 1.32
SMIM29-204ENST00000463083 CENPBP07199 599 aaPredicted RBP23.29■■□□□ 1.32
SMIM29-204ENST00000463083 HEG1Q9ULI3 1381 aa23.28■■□□□ 1.32
SMIM29-204ENST00000463083 GIGYF1O75420 1035 aaPredicted RBP23.28■■□□□ 1.32
SMIM29-204ENST00000463083 SNRPA1P09661 255 aaKnown RBP23.28■■□□□ 1.32
SMIM29-204ENST00000463083 PRAMEF22A3QJZ6 481 aa23.27■■□□□ 1.32
SMIM29-204ENST00000463083 APBA3O96018 575 aa23.27■■□□□ 1.32
SMIM29-204ENST00000463083 LOC102724428A0A0B4J2F2 783 aa23.26■■□□□ 1.31
SMIM29-204ENST00000463083 VAMP4O75379 141 aa23.26■■□□□ 1.31
SMIM29-204ENST00000463083 SIK1P57059 783 aa23.26■■□□□ 1.31
SMIM29-204ENST00000463083 EIF2S2P20042 333 aaKnown RBP23.25■■□□□ 1.31
SMIM29-204ENST00000463083 NECTIN2Q92692 538 aa23.25■■□□□ 1.31
SMIM29-204ENST00000463083 CT47B1P0C2W7 299 aaPredicted RBP23.24■■□□□ 1.31
SMIM29-204ENST00000463083 ATP6V1AP38606 617 aa23.24■■□□□ 1.31
SMIM29-204ENST00000463083 HOXB7P09629 217 aa23.24■■□□□ 1.31
SMIM29-204ENST00000463083 SF3B2Q13435 895 aaKnown RBP23.24■■□□□ 1.31
SMIM29-204ENST00000463083 VSIG10Q8N0Z9 540 aa23.24■■□□□ 1.31
SMIM29-204ENST00000463083 SLC4A9Q96Q91 983 aa23.24■■□□□ 1.31
SMIM29-204ENST00000463083 C5P01031 1676 aa23.23■■□□□ 1.31
SMIM29-204ENST00000463083 DNAJC10Q8IXB1 793 aa23.23■■□□□ 1.31
SMIM29-204ENST00000463083 USP16Q9Y5T5 823 aa23.23■■□□□ 1.31
SMIM29-204ENST00000463083 SOS1Q07889 1333 aaPredicted RBP23.22■■□□□ 1.31
SMIM29-204ENST00000463083 TCERG1O14776 1098 aaKnown RBP23.22■■□□□ 1.31
SMIM29-204ENST00000463083 KCNQ4P56696 695 aa23.22■■□□□ 1.31
SMIM29-204ENST00000463083 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
SMIM29-204ENST00000463083 TNS1Q9HBL0 1735 aaKnown RBP23.22■■□□□ 1.31
SMIM29-204ENST00000463083 CCNL1Q9UK58 526 aaPredicted RBP23.22■■□□□ 1.31
SMIM29-204ENST00000463083 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
SMIM29-204ENST00000463083 RCAN3Q9UKA8 241 aa23.2■■□□□ 1.3
SMIM29-204ENST00000463083 LY75O60449 1722 aa23.2■■□□□ 1.3
SMIM29-204ENST00000463083 CCDC30Q5VVM6 783 aa23.19■■□□□ 1.3
SMIM29-204ENST00000463083 BCL2L13Q9BXK5 485 aa23.19■■□□□ 1.3
SMIM29-204ENST00000463083 PLSCR1O15162 318 aa23.18■■□□□ 1.3
SMIM29-204ENST00000463083 STARD3NLO95772 234 aa23.18■■□□□ 1.3
SMIM29-204ENST00000463083 ITPK1Q13572 414 aa23.18■■□□□ 1.3
SMIM29-204ENST00000463083 ZNF428Q96B54 188 aa23.18■■□□□ 1.3
SMIM29-204ENST00000463083 CHMP4AQ9BY43 222 aa23.18■■□□□ 1.3
SMIM29-204ENST00000463083 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
SMIM29-204ENST00000463083 TJP1Q07157 1748 aa23.17■■□□□ 1.3
SMIM29-204ENST00000463083 LAMB4A4D0S4 1761 aa23.17■■□□□ 1.3
SMIM29-204ENST00000463083 TXNRD1Q16881 649 aa23.17■■□□□ 1.3
SMIM29-204ENST00000463083 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
SMIM29-204ENST00000463083 STK31Q9BXU1 1019 aa23.17■■□□□ 1.3
SMIM29-204ENST00000463083 SMC4Q9NTJ3 1288 aa23.17■■□□□ 1.3
SMIM29-204ENST00000463083 SLC27A3Q5K4L6 730 aa23.16■■□□□ 1.3
SMIM29-204ENST00000463083 ILDR2Q71H61 639 aa23.16■■□□□ 1.3
SMIM29-204ENST00000463083 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms