RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 LINC00116Q8NCU8 138 aa24.94■■□□□ 1.58
PDLIM4-204ENST00000462597 AK7Q96M32 723 aa24.94■■□□□ 1.58
PDLIM4-204ENST00000462597 ATG3Q9NT62 314 aa24.94■■□□□ 1.58
PDLIM4-204ENST00000462597 ITPK1Q13572 414 aa24.93■■□□□ 1.58
PDLIM4-204ENST00000462597 PHF14O94880 888 aa24.92■■□□□ 1.58
PDLIM4-204ENST00000462597 AMOTQ4VCS5 1084 aa24.92■■□□□ 1.58
PDLIM4-204ENST00000462597 DCAF5Q96JK2 942 aa24.92■■□□□ 1.58
PDLIM4-204ENST00000462597 ERVV-2B6SEH9 535 aa24.9■■□□□ 1.58
PDLIM4-204ENST00000462597 HSP90AB1P08238 724 aaKnown RBP24.9■■□□□ 1.58
PDLIM4-204ENST00000462597 ATP6V1AP38606 617 aa24.89■■□□□ 1.58
PDLIM4-204ENST00000462597 C1orf141Q5JVX7 400 aa24.89■■□□□ 1.58
PDLIM4-204ENST00000462597 NLGN2Q8NFZ4 835 aa24.89■■□□□ 1.58
PDLIM4-204ENST00000462597 SCN11AQ9UI33 1791 aa24.89■■□□□ 1.57
PDLIM4-204ENST00000462597 HMOX1P09601 288 aa24.88■■□□□ 1.57
PDLIM4-204ENST00000462597 FLAD1Q8NFF5 587 aa24.88■■□□□ 1.57
PDLIM4-204ENST00000462597 COL5A3P25940 1745 aaPredicted RBP24.88■■□□□ 1.57
PDLIM4-204ENST00000462597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.87■■□□□ 1.57
PDLIM4-204ENST00000462597 PPP2R1AP30153 589 aa24.87■■□□□ 1.57
PDLIM4-204ENST00000462597 CABP4P57796 275 aa24.87■■□□□ 1.57
PDLIM4-204ENST00000462597 ZNF831Q5JPB2 1677 aa24.87■■□□□ 1.57
PDLIM4-204ENST00000462597 VIRMAQ69YN4 1812 aaKnown RBP24.86■■□□□ 1.57
PDLIM4-204ENST00000462597 COL3A1P02461 1466 aaPredicted RBP24.86■■□□□ 1.57
PDLIM4-204ENST00000462597 HMGB2P26583 209 aaKnown RBP24.86■■□□□ 1.57
PDLIM4-204ENST00000462597 RALBP1Q15311 655 aa24.86■■□□□ 1.57
PDLIM4-204ENST00000462597 SLC4A9Q96Q91 983 aa24.86■■□□□ 1.57
PDLIM4-204ENST00000462597 RBM42Q9BTD8 480 aaKnown RBP24.86■■□□□ 1.57
PDLIM4-204ENST00000462597 GNPATO15228 680 aa24.85■■□□□ 1.57
PDLIM4-204ENST00000462597 GOLGB1Q14789 3259 aaKnown RBP24.84■■□□□ 1.57
PDLIM4-204ENST00000462597 DIAPH1O60610 1272 aaKnown RBP24.83■■□□□ 1.57
PDLIM4-204ENST00000462597 SSFA2P28290 1259 aa24.83■■□□□ 1.57
PDLIM4-204ENST00000462597 PELP1Q8IZL8 1130 aaKnown RBP24.83■■□□□ 1.57
PDLIM4-204ENST00000462597 PRKRIP1Q9H875 184 aaPredicted RBP24.83■■□□□ 1.57
PDLIM4-204ENST00000462597 CHD4Q14839 1912 aa24.82■■□□□ 1.56
PDLIM4-204ENST00000462597 TJP1Q07157 1748 aa24.81■■□□□ 1.56
PDLIM4-204ENST00000462597 GPR162Q16538 588 aa24.81■■□□□ 1.56
PDLIM4-204ENST00000462597 NFATC2IPQ8NCF5 419 aa24.81■■□□□ 1.56
PDLIM4-204ENST00000462597 PTCD1O75127 700 aaKnown RBP24.8■■□□□ 1.56
PDLIM4-204ENST00000462597 MYBBP1AQ9BQG0 1328 aaKnown RBP24.8■■□□□ 1.56
PDLIM4-204ENST00000462597 AKAP4Q5JQC9 854 aa24.79■■□□□ 1.56
PDLIM4-204ENST00000462597 MYH14Q7Z406 1995 aaKnown RBP24.78■■□□□ 1.56
PDLIM4-204ENST00000462597 ANP32CO43423 234 aa24.78■■□□□ 1.56
PDLIM4-204ENST00000462597 C4AP0C0L4 1744 aa24.78■■□□□ 1.56
PDLIM4-204ENST00000462597 MRC1P22897 1456 aa24.77■■□□□ 1.56
PDLIM4-204ENST00000462597 LGR6Q9HBX8 967 aa24.77■■□□□ 1.56
PDLIM4-204ENST00000462597 ADAMTS7Q9UKP4 1686 aa24.77■■□□□ 1.56
PDLIM4-204ENST00000462597 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
PDLIM4-204ENST00000462597 MTHFSDQ2M296 383 aaKnown RBP24.76■■□□□ 1.55
PDLIM4-204ENST00000462597 CFAP53Q96M91 514 aa24.76■■□□□ 1.55
PDLIM4-204ENST00000462597 CICQ96RK0 1608 aaPredicted RBP24.75■■□□□ 1.55
PDLIM4-204ENST00000462597 YBX3P16989 372 aaKnown RBP eCLIP24.74■■□□□ 1.55
PDLIM4-204ENST00000462597 RTCBQ9Y3I0 505 aaKnown RBP24.74■■□□□ 1.55
PDLIM4-204ENST00000462597 CNTNAP4Q9C0A0 1308 aa24.74■■□□□ 1.55
PDLIM4-204ENST00000462597 RNMTO43148 476 aaKnown RBP24.73■■□□□ 1.55
PDLIM4-204ENST00000462597 SLC52A2Q9HAB3 445 aa24.73■■□□□ 1.55
PDLIM4-204ENST00000462597 CD2APQ9Y5K6 639 aa24.72■■□□□ 1.55
PDLIM4-204ENST00000462597 TRAPPC3LQ5T215 181 aa24.71■■□□□ 1.55
PDLIM4-204ENST00000462597 RC3H1Q5TC82 1133 aaKnown RBP24.71■■□□□ 1.55
PDLIM4-204ENST00000462597 ARHGEF1Q92888 912 aaKnown RBP24.7■■□□□ 1.54
PDLIM4-204ENST00000462597 KCPQ6ZWJ8 1503 aa24.7■■□□□ 1.54
PDLIM4-204ENST00000462597 RPS6KA4O75676 772 aa24.69■■□□□ 1.54
PDLIM4-204ENST00000462597 CRKLP46109 303 aaKnown RBP24.69■■□□□ 1.54
PDLIM4-204ENST00000462597 SLC39A6Q13433 755 aa24.69■■□□□ 1.54
PDLIM4-204ENST00000462597 ZNF784Q8NCA9 323 aaPredicted RBP24.69■■□□□ 1.54
PDLIM4-204ENST00000462597 MMP10P09238 476 aa24.68■■□□□ 1.54
PDLIM4-204ENST00000462597 DIEXFQ68CQ4 756 aaKnown RBP24.68■■□□□ 1.54
PDLIM4-204ENST00000462597 UBR2Q8IWV8 1755 aa24.67■■□□□ 1.54
PDLIM4-204ENST00000462597 WWC3Q9ULE0 1092 aa24.67■■□□□ 1.54
PDLIM4-204ENST00000462597 ADRA2BP18089 450 aa24.66■■□□□ 1.54
PDLIM4-204ENST00000462597 DNAJC10Q8IXB1 793 aa24.66■■□□□ 1.54
PDLIM4-204ENST00000462597 SIPA1L3O60292 1781 aaPredicted RBP24.65■■□□□ 1.54
PDLIM4-204ENST00000462597 GYS1P13807 737 aa24.65■■□□□ 1.54
PDLIM4-204ENST00000462597 RFC4P35249 363 aa24.65■■□□□ 1.54
PDLIM4-204ENST00000462597 KIAA1551Q9HCM1 1747 aa24.65■■□□□ 1.54
PDLIM4-204ENST00000462597 KIF13BQ9NQT8 1826 aa24.65■■□□□ 1.54
PDLIM4-204ENST00000462597 N4BP2Q86UW6 1770 aaPredicted RBP24.63■■□□□ 1.53
PDLIM4-204ENST00000462597 INTS5Q6P9B9 1019 aaKnown RBP24.63■■□□□ 1.53
PDLIM4-204ENST00000462597 SRP68Q9UHB9 627 aaKnown RBP24.63■■□□□ 1.53
PDLIM4-204ENST00000462597 NUDCQ9Y266 331 aa24.63■■□□□ 1.53
PDLIM4-204ENST00000462597 PRKAR2BP31323 418 aa24.62■■□□□ 1.53
PDLIM4-204ENST00000462597 NLGN1Q8N2Q7 840 aa24.62■■□□□ 1.53
PDLIM4-204ENST00000462597 GRIN3BO60391 1043 aa24.61■■□□□ 1.53
PDLIM4-204ENST00000462597 IL17REQ8NFR9 667 aa24.61■■□□□ 1.53
PDLIM4-204ENST00000462597 GAS2L2Q8NHY3 880 aa24.61■■□□□ 1.53
PDLIM4-204ENST00000462597 PHACTR3Q96KR7 559 aa24.61■■□□□ 1.53
PDLIM4-204ENST00000462597 RSPH6AQ9H0K4 717 aa24.61■■□□□ 1.53
PDLIM4-204ENST00000462597 GNAT3A8MTJ3 354 aa24.6■■□□□ 1.53
PDLIM4-204ENST00000462597 CCDC87Q9NVE4 849 aa24.6■■□□□ 1.53
PDLIM4-204ENST00000462597 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
PDLIM4-204ENST00000462597 PXDNLA1KZ92 1463 aa24.59■■□□□ 1.53
PDLIM4-204ENST00000462597 CYP19A1P11511 503 aaPredicted RBP24.59■■□□□ 1.53
PDLIM4-204ENST00000462597 USP42Q9H9J4 1324 aaKnown RBP24.59■■□□□ 1.53
PDLIM4-204ENST00000462597 U2AF1L5P0DN76 240 aaPredicted RBP24.58■■□□□ 1.53
PDLIM4-204ENST00000462597 U2AF1Q01081 240 aaKnown RBP eCLIP24.58■■□□□ 1.53
PDLIM4-204ENST00000462597 TEFQ10587 303 aa24.57■■□□□ 1.52
PDLIM4-204ENST00000462597 FKBP8Q14318 412 aa24.57■■□□□ 1.52
PDLIM4-204ENST00000462597 CCDC184Q52MB2 194 aa24.57■■□□□ 1.52
PDLIM4-204ENST00000462597 SOS1Q07889 1333 aaPredicted RBP24.57■■□□□ 1.52
PDLIM4-204ENST00000462597 ZBTB1Q9Y2K1 713 aa24.55■■□□□ 1.52
PDLIM4-204ENST00000462597 PARP3Q9Y6F1 533 aa24.55■■□□□ 1.52
PDLIM4-204ENST00000462597 TTC5Q8N0Z6 440 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms