RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.99□□□□□ -0.65
EIF3A-202ENST00000462527 NUP160Q12769 1436 aa10.99□□□□□ -0.65
EIF3A-202ENST00000462527 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
EIF3A-202ENST00000462527 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
EIF3A-202ENST00000462527 GUCA2AQ02747 115 aa10.98□□□□□ -0.65
EIF3A-202ENST00000462527 ZDHHC16Q969W1 377 aa10.98□□□□□ -0.65
EIF3A-202ENST00000462527 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
EIF3A-202ENST00000462527 PRIMPOLQ96LW4 560 aa10.98□□□□□ -0.65
EIF3A-202ENST00000462527 CARMIL1Q5VZK9 1371 aa10.98□□□□□ -0.65
EIF3A-202ENST00000462527 MAP4K4O95819 1239 aaPredicted RBP10.97□□□□□ -0.65
EIF3A-202ENST00000462527 ECM1Q16610 540 aa10.97□□□□□ -0.65
EIF3A-202ENST00000462527 PPP1R18Q6NYC8 613 aa10.97□□□□□ -0.65
EIF3A-202ENST00000462527 VPS37DQ86XT2 251 aa10.97□□□□□ -0.65
EIF3A-202ENST00000462527 VTI1BQ9UEU0 232 aa10.97□□□□□ -0.65
EIF3A-202ENST00000462527 PARP2Q9UGN5 583 aa10.97□□□□□ -0.65
EIF3A-202ENST00000462527 KIF21BO75037 1637 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 ARHGEF11O15085 1522 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 RAPGEF2Q9Y4G8 1499 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 PEX14O75381 377 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 PRPF40AO75400 957 aaKnown RBP10.96□□□□□ -0.65
EIF3A-202ENST00000462527 STK10O94804 968 aaKnown RBP10.96□□□□□ -0.65
EIF3A-202ENST00000462527 NFE2L2Q16236 605 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 OCLNQ16625 522 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 GRIPAP1Q4V328 841 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 SMC5Q8IY18 1101 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 PLPP7Q8NBV4 271 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 RBCK1Q9BYM8 510 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 CHPF2Q9P2E5 772 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 COL4A3BPQ9Y5P4 624 aa10.96□□□□□ -0.65
EIF3A-202ENST00000462527 PRXQ9BXM0 1461 aa10.95□□□□□ -0.66
EIF3A-202ENST00000462527 MMRN1Q13201 1228 aa10.95□□□□□ -0.66
EIF3A-202ENST00000462527 POTEEQ6S8J3 1075 aa10.95□□□□□ -0.66
EIF3A-202ENST00000462527 TMC4Q7Z404 712 aa10.95□□□□□ -0.66
EIF3A-202ENST00000462527 CCAR1Q8IX12 1150 aaKnown RBP10.95□□□□□ -0.66
EIF3A-202ENST00000462527 MRFAP1L1Q96HT8 127 aa10.95□□□□□ -0.66
EIF3A-202ENST00000462527 INPP5FQ9Y2H2 1132 aa10.95□□□□□ -0.66
EIF3A-202ENST00000462527 FAN1Q9Y2M0 1017 aa10.95□□□□□ -0.66
EIF3A-202ENST00000462527 DNMT3AQ9Y6K1 912 aaPredicted RBP10.95□□□□□ -0.66
EIF3A-202ENST00000462527 CCDC194A0A1B0GVG4 234 aa10.94□□□□□ -0.66
EIF3A-202ENST00000462527 EIF3JO75822 258 aaKnown RBP10.94□□□□□ -0.66
EIF3A-202ENST00000462527 LDHBP07195 334 aaKnown RBP10.94□□□□□ -0.66
EIF3A-202ENST00000462527 SEC13P55735 322 aa10.94□□□□□ -0.66
EIF3A-202ENST00000462527 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
EIF3A-202ENST00000462527 NOD1Q9Y239 953 aa10.94□□□□□ -0.66
EIF3A-202ENST00000462527 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
EIF3A-202ENST00000462527 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
EIF3A-202ENST00000462527 EEA1Q15075 1411 aa10.93□□□□□ -0.66
EIF3A-202ENST00000462527 NBPF26B4DH59 902 aa10.93□□□□□ -0.66
EIF3A-202ENST00000462527 PSMD2Q13200 908 aa10.93□□□□□ -0.66
EIF3A-202ENST00000462527 NUDT18Q6ZVK8 323 aa10.93□□□□□ -0.66
EIF3A-202ENST00000462527 TMC7Q7Z402 723 aa10.93□□□□□ -0.66
EIF3A-202ENST00000462527 JAZF1Q86VZ6 243 aa10.93□□□□□ -0.66
EIF3A-202ENST00000462527 CEP126Q9P2H0 1117 aa10.93□□□□□ -0.66
EIF3A-202ENST00000462527 NDUFB5O43674 189 aa10.92□□□□□ -0.66
EIF3A-202ENST00000462527 TNNI2P48788 182 aa10.92□□□□□ -0.66
EIF3A-202ENST00000462527 FMR1Q06787 632 aaKnown RBP eCLIP10.92□□□□□ -0.66
EIF3A-202ENST00000462527 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
EIF3A-202ENST00000462527 ZNF454Q8N9F8 522 aa10.92□□□□□ -0.66
EIF3A-202ENST00000462527 DUSP9Q99956 384 aaKnown RBP10.92□□□□□ -0.66
EIF3A-202ENST00000462527 PTCD1O75127 700 aaKnown RBP10.91□□□□□ -0.66
EIF3A-202ENST00000462527 FAM13AO94988 1023 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 CLDN10P78369 228 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 DAB2P98082 770 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 PLCB3Q01970 1234 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 KCNH2Q12809 1159 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 PDE3BQ13370 1112 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 FILIP1Q7Z7B0 1213 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 SIX5Q8N196 739 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 HLA-CQ95604 372 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 FAM161BQ96MY7 647 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 SEPT3Q9UH03 358 aa10.91□□□□□ -0.66
EIF3A-202ENST00000462527 DMGDHQ9UI17 866 aaKnown RBP10.91□□□□□ -0.66
EIF3A-202ENST00000462527 PER1O15534 1290 aaPredicted RBP10.9□□□□□ -0.66
EIF3A-202ENST00000462527 TREHO43280 583 aa10.9□□□□□ -0.66
EIF3A-202ENST00000462527 ATP2B2Q01814 1243 aa10.9□□□□□ -0.66
EIF3A-202ENST00000462527 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
EIF3A-202ENST00000462527 CCDC136Q96JN2 1154 aa10.9□□□□□ -0.66
EIF3A-202ENST00000462527 PCDH12Q9NPG4 1184 aa10.9□□□□□ -0.66
EIF3A-202ENST00000462527 FAM198AQ9UFP1 575 aa10.9□□□□□ -0.66
EIF3A-202ENST00000462527 ARAP1Q96P48 1450 aa10.89□□□□□ -0.67
EIF3A-202ENST00000462527 PPP1R12AO14974 1030 aaPredicted RBP10.89□□□□□ -0.67
EIF3A-202ENST00000462527 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
EIF3A-202ENST00000462527 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
EIF3A-202ENST00000462527 IFT57Q9NWB7 429 aa10.89□□□□□ -0.67
EIF3A-202ENST00000462527 FKBPLQ9UIM3 349 aa10.89□□□□□ -0.67
EIF3A-202ENST00000462527 PNMA3Q9UL41 463 aa10.89□□□□□ -0.67
EIF3A-202ENST00000462527 KIAA0586Q9BVV6 1533 aa10.89□□□□□ -0.67
EIF3A-202ENST00000462527 DNAJC6O75061 913 aa10.88□□□□□ -0.67
EIF3A-202ENST00000462527 XRCC5P13010 732 aaKnown RBP10.88□□□□□ -0.67
EIF3A-202ENST00000462527 MAPK8P45983 427 aa10.88□□□□□ -0.67
EIF3A-202ENST00000462527 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
EIF3A-202ENST00000462527 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
EIF3A-202ENST00000462527 TMX1Q9H3N1 280 aa10.88□□□□□ -0.67
EIF3A-202ENST00000462527 MRPL42Q9Y6G3 142 aaKnown RBP10.88□□□□□ -0.67
EIF3A-202ENST00000462527 IRX6P78412 446 aaPredicted RBP10.87□□□□□ -0.67
EIF3A-202ENST00000462527 MTMR3Q13615 1198 aa10.87□□□□□ -0.67
EIF3A-202ENST00000462527 TEX2Q8IWB9 1127 aa10.87□□□□□ -0.67
EIF3A-202ENST00000462527 PHTF2Q8N3S3 785 aa10.87□□□□□ -0.67
EIF3A-202ENST00000462527 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms