RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 VSIG8P0DPA2 414 aa5.65□□□□□ -1.5
CNOT11-203ENST00000462489 GDF10P55107 478 aa5.65□□□□□ -1.5
CNOT11-203ENST00000462489 CENPCQ03188 943 aa5.65□□□□□ -1.5
CNOT11-203ENST00000462489 LYSMD3Q7Z3D4 306 aa5.65□□□□□ -1.5
CNOT11-203ENST00000462489 SIX5Q8N196 739 aa5.65□□□□□ -1.5
CNOT11-203ENST00000462489 FHDC1Q9C0D6 1143 aaPredicted RBP5.65□□□□□ -1.5
CNOT11-203ENST00000462489 FIGNL2A6NMB9 653 aa5.64□□□□□ -1.51
CNOT11-203ENST00000462489 TMEM229AB2RXF0 380 aa5.64□□□□□ -1.51
CNOT11-203ENST00000462489 M0R2N6 131 aa5.64□□□□□ -1.51
CNOT11-203ENST00000462489 BACH1O14867 736 aa5.64□□□□□ -1.51
CNOT11-203ENST00000462489 LMOD1P29536 600 aaPredicted RBP5.64□□□□□ -1.51
CNOT11-203ENST00000462489 CLDN10P78369 228 aa5.64□□□□□ -1.51
CNOT11-203ENST00000462489 OGFOD1Q8N543 542 aa5.64□□□□□ -1.51
CNOT11-203ENST00000462489 RAB6BQ9NRW1 208 aa5.64□□□□□ -1.51
CNOT11-203ENST00000462489 DNAAF2Q9NVR5 837 aaKnown RBP5.64□□□□□ -1.51
CNOT11-203ENST00000462489 FAM196BA6NMK8 535 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 PPFIA3O75145 1194 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 DKK1O94907 266 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 SMTNP53814 917 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 MTFR1Q15390 333 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 SLC27A3Q5K4L6 730 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 PPARGC1BQ86YN6 1023 aaKnown RBP5.63□□□□□ -1.51
CNOT11-203ENST00000462489 KCTD17Q8N5Z5 321 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 CCDC97Q96F63 343 aaPredicted RBP5.63□□□□□ -1.51
CNOT11-203ENST00000462489 VRTNQ9H8Y1 702 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 TIMELESSQ9UNS1 1208 aa5.63□□□□□ -1.51
CNOT11-203ENST00000462489 SLC35F4A4IF30 521 aa5.62□□□□□ -1.51
CNOT11-203ENST00000462489 CDK2AP1O14519 115 aa5.62□□□□□ -1.51
CNOT11-203ENST00000462489 SRPK2P78362 688 aaKnown RBP5.62□□□□□ -1.51
CNOT11-203ENST00000462489 PTSQ03393 145 aa5.62□□□□□ -1.51
CNOT11-203ENST00000462489 PSME1Q06323 249 aa5.62□□□□□ -1.51
CNOT11-203ENST00000462489 KCNMA1Q12791 1236 aa5.62□□□□□ -1.51
CNOT11-203ENST00000462489 PTK7Q13308 1070 aa5.62□□□□□ -1.51
CNOT11-203ENST00000462489 CCDC102BQ68D86 513 aa5.62□□□□□ -1.51
CNOT11-203ENST00000462489 LARP1Q6PKG0 1096 aaKnown RBP5.62□□□□□ -1.51
CNOT11-203ENST00000462489 ZSCAN10Q96SZ4 725 aaPredicted RBP5.62□□□□□ -1.51
CNOT11-203ENST00000462489 SENP3-EIF4A1A0A087X0R7 540 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 ARID3CA6NKF2 412 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 STAU1O95793 577 aaKnown RBP5.61□□□□□ -1.51
CNOT11-203ENST00000462489 RASA1P20936 1047 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 GTF2E1P29083 439 aaPredicted RBP5.61□□□□□ -1.51
CNOT11-203ENST00000462489 EPHA4P54764 986 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 TLR1Q15399 786 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 NBPF10Q6P3W6 841 aaKnown RBP5.61□□□□□ -1.51
CNOT11-203ENST00000462489 TAS1R3Q7RTX0 852 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 PRICKLE2Q7Z3G6 844 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 NBPF15Q8N660 670 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 TPCN2Q8NHX9 752 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 ZNF358Q9NW07 568 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 KIAA1024Q9UPX6 916 aa5.61□□□□□ -1.51
CNOT11-203ENST00000462489 A6NJY4 79 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 FOXK2Q01167 660 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 KRT76Q01546 638 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 POU4F2Q12837 409 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 ELOAQ14241 798 aaKnown RBP5.6□□□□□ -1.51
CNOT11-203ENST00000462489 GNASQ5JWF2 1037 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 ZNF295-AS1Q8N0V1 137 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 CCDC155Q8N6L0 562 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 GPR161Q8N6U8 529 aaKnown RBP5.6□□□□□ -1.51
CNOT11-203ENST00000462489 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
CNOT11-203ENST00000462489 RHBDD1Q8TEB9 315 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 C1orf115Q9H7X2 142 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 IQSEC3Q9UPP2 1182 aaPredicted RBP5.6□□□□□ -1.51
CNOT11-203ENST00000462489 DYRK1BQ9Y463 629 aa5.6□□□□□ -1.51
CNOT11-203ENST00000462489 RBM19Q9Y4C8 960 aaKnown RBP5.6□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L15C9J2P7 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L10C9JJH3 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L13C9JLJ4 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L12C9JPN9 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L11C9JVI0 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L21D6R901 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L18D6R9N7 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L22D6RA61 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L17D6RBQ6 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L19D6RCP7 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L20D6RJB6 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 SEC13P55735 322 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 USP17L24Q0WX57 530 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 CRTC2Q53ET0 693 aaPredicted RBP5.59□□□□□ -1.51
CNOT11-203ENST00000462489 TMEM214Q6NUQ4 689 aaKnown RBP5.59□□□□□ -1.51
CNOT11-203ENST00000462489 ANKMY2Q8IV38 441 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 CCDC82Q8N4S0 544 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 NANOS1Q8WY41 292 aaKnown RBP5.59□□□□□ -1.51
CNOT11-203ENST00000462489 PBXIP1Q96AQ6 731 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 GMCL1Q96IK5 515 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 NIFKQ9BYG3 293 aaKnown RBP5.59□□□□□ -1.51
CNOT11-203ENST00000462489 SCHIP1Q9P0W5 487 aaPredicted RBP5.59□□□□□ -1.51
CNOT11-203ENST00000462489 SERTAD1Q9UHV2 236 aa5.59□□□□□ -1.51
CNOT11-203ENST00000462489 ATG7O95352 703 aa5.58□□□□□ -1.52
CNOT11-203ENST00000462489 C4orf17Q53FE4 359 aa5.58□□□□□ -1.52
CNOT11-203ENST00000462489 ZNF594Q96JF6 807 aaPredicted RBP5.58□□□□□ -1.52
CNOT11-203ENST00000462489 ARXQ96QS3 562 aa5.58□□□□□ -1.52
CNOT11-203ENST00000462489 A0A1B0GTH6 734 aa5.57□□□□□ -1.52
CNOT11-203ENST00000462489 PPP1R15AO75807 674 aaPredicted RBP5.57□□□□□ -1.52
CNOT11-203ENST00000462489 F11P03951 625 aa5.57□□□□□ -1.52
CNOT11-203ENST00000462489 RHOQP17081 205 aa5.57□□□□□ -1.52
CNOT11-203ENST00000462489 RFX1P22670 979 aa5.57□□□□□ -1.52
CNOT11-203ENST00000462489 ITGA6P23229 1130 aa5.57□□□□□ -1.52
CNOT11-203ENST00000462489 TEAD4Q15561 434 aa5.57□□□□□ -1.52
CNOT11-203ENST00000462489 POTEAQ6S8J7 498 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms