RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 LRRC4BQ9NT99 713 aa11.9□□□□□ -0.5
DDX39B-216ENST00000462421 KCNQ4P56696 695 aa11.89□□□□□ -0.51
DDX39B-216ENST00000462421 ZNF827Q17R98 1081 aa11.89□□□□□ -0.51
DDX39B-216ENST00000462421 ARXQ96QS3 562 aa11.89□□□□□ -0.51
DDX39B-216ENST00000462421 GNAT3A8MTJ3 354 aa11.88□□□□□ -0.51
DDX39B-216ENST00000462421 GNPATO15228 680 aa11.88□□□□□ -0.51
DDX39B-216ENST00000462421 DDX10Q13206 875 aaKnown RBP11.88□□□□□ -0.51
DDX39B-216ENST00000462421 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
DDX39B-216ENST00000462421 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
DDX39B-216ENST00000462421 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
DDX39B-216ENST00000462421 SHANK3Q9BYB0 1731 aa11.87□□□□□ -0.51
DDX39B-216ENST00000462421 SSFA2P28290 1259 aa11.87□□□□□ -0.51
DDX39B-216ENST00000462421 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
DDX39B-216ENST00000462421 WDR43Q15061 677 aaKnown RBP eCLIP11.87□□□□□ -0.51
DDX39B-216ENST00000462421 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
DDX39B-216ENST00000462421 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
DDX39B-216ENST00000462421 PTCD1O75127 700 aaKnown RBP11.86□□□□□ -0.51
DDX39B-216ENST00000462421 ATG3Q9NT62 314 aa11.86□□□□□ -0.51
DDX39B-216ENST00000462421 MAP3K5Q99683 1374 aa11.86□□□□□ -0.51
DDX39B-216ENST00000462421 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
DDX39B-216ENST00000462421 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
DDX39B-216ENST00000462421 FCHSD2O94868 740 aa11.85□□□□□ -0.51
DDX39B-216ENST00000462421 RFC4P35249 363 aa11.85□□□□□ -0.51
DDX39B-216ENST00000462421 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
DDX39B-216ENST00000462421 TRAPPC3LQ5T215 181 aa11.85□□□□□ -0.51
DDX39B-216ENST00000462421 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
DDX39B-216ENST00000462421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
DDX39B-216ENST00000462421 STARD3NLO95772 234 aa11.83□□□□□ -0.52
DDX39B-216ENST00000462421 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-216ENST00000462421 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
DDX39B-216ENST00000462421 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-216ENST00000462421 FHDC1Q9C0D6 1143 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-216ENST00000462421 KDM6AO15550 1401 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-216ENST00000462421 MYBBP1AQ9BQG0 1328 aaKnown RBP11.83□□□□□ -0.52
DDX39B-216ENST00000462421 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
DDX39B-216ENST00000462421 ZPR1O75312 459 aa11.82□□□□□ -0.52
DDX39B-216ENST00000462421 LMOD3Q0VAK6 560 aa11.82□□□□□ -0.52
DDX39B-216ENST00000462421 GPR162Q16538 588 aa11.82□□□□□ -0.52
DDX39B-216ENST00000462421 LINC00116Q8NCU8 138 aa11.82□□□□□ -0.52
DDX39B-216ENST00000462421 TEX13AQ9BXU3 409 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-216ENST00000462421 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-216ENST00000462421 LY75O60449 1722 aa11.82□□□□□ -0.52
DDX39B-216ENST00000462421 C5P01031 1676 aa11.81□□□□□ -0.52
DDX39B-216ENST00000462421 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
DDX39B-216ENST00000462421 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
DDX39B-216ENST00000462421 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
DDX39B-216ENST00000462421 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 BTBD11A6QL63 1104 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 NPHP1O15259 732 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
DDX39B-216ENST00000462421 PTGER2P43116 358 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 LGR6Q9HBX8 967 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 COL3A1P02461 1466 aaPredicted RBP11.8□□□□□ -0.52
DDX39B-216ENST00000462421 C4BP0C0L5 1744 aa11.8□□□□□ -0.52
DDX39B-216ENST00000462421 A0A087WZG4 1122 aa11.79□□□□□ -0.52
DDX39B-216ENST00000462421 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
DDX39B-216ENST00000462421 ITPK1Q13572 414 aa11.79□□□□□ -0.52
DDX39B-216ENST00000462421 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
DDX39B-216ENST00000462421 PNISRQ8TF01 805 aaKnown RBP11.79□□□□□ -0.52
DDX39B-216ENST00000462421 SYT17Q9BSW7 474 aa11.79□□□□□ -0.52
DDX39B-216ENST00000462421 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
DDX39B-216ENST00000462421 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
DDX39B-216ENST00000462421 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
DDX39B-216ENST00000462421 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
DDX39B-216ENST00000462421 ITGB4P16144 1822 aa11.78□□□□□ -0.52
DDX39B-216ENST00000462421 ANP32CO43423 234 aa11.77□□□□□ -0.53
DDX39B-216ENST00000462421 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
DDX39B-216ENST00000462421 ZNF790Q6PG37 636 aa11.77□□□□□ -0.53
DDX39B-216ENST00000462421 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.53
DDX39B-216ENST00000462421 GRIN3BO60391 1043 aa11.76□□□□□ -0.53
DDX39B-216ENST00000462421 YY1P25490 414 aa11.76□□□□□ -0.53
DDX39B-216ENST00000462421 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
DDX39B-216ENST00000462421 SRCAPQ6ZRS2 3230 aa11.76□□□□□ -0.53
DDX39B-216ENST00000462421 MRC1P22897 1456 aa11.76□□□□□ -0.53
DDX39B-216ENST00000462421 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-216ENST00000462421 MMP10P09238 476 aa11.75□□□□□ -0.53
DDX39B-216ENST00000462421 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
DDX39B-216ENST00000462421 MCM10Q7L590 875 aa11.75□□□□□ -0.53
DDX39B-216ENST00000462421 DNAJC10Q8IXB1 793 aa11.75□□□□□ -0.53
DDX39B-216ENST00000462421 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
DDX39B-216ENST00000462421 PHACTR3Q96KR7 559 aa11.75□□□□□ -0.53
DDX39B-216ENST00000462421 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
DDX39B-216ENST00000462421 TAF7Q15545 349 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-216ENST00000462421 SNRPA1P09661 255 aaKnown RBP11.73□□□□□ -0.53
DDX39B-216ENST00000462421 RIPK4P57078 832 aa11.73□□□□□ -0.53
DDX39B-216ENST00000462421 IL17REQ8NFR9 667 aa11.73□□□□□ -0.53
DDX39B-216ENST00000462421 SGIP1Q9BQI5 828 aa11.73□□□□□ -0.53
DDX39B-216ENST00000462421 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
DDX39B-216ENST00000462421 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
DDX39B-216ENST00000462421 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
DDX39B-216ENST00000462421 COL15A1P39059 1388 aa11.72□□□□□ -0.53
DDX39B-216ENST00000462421 CYP19A1P11511 503 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-216ENST00000462421 CALD1Q05682 793 aaKnown RBP11.72□□□□□ -0.53
DDX39B-216ENST00000462421 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
DDX39B-216ENST00000462421 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-216ENST00000462421 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms