RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
PHGDH-203ENST00000462324 EN1Q05925 392 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-203ENST00000462324 DEFB132Q7Z7B7 95 aa17.19■□□□□ 0.34
PHGDH-203ENST00000462324 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
PHGDH-203ENST00000462324 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
PHGDH-203ENST00000462324 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
PHGDH-203ENST00000462324 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
PHGDH-203ENST00000462324 SBF2Q86WG5 1849 aa17.18■□□□□ 0.34
PHGDH-203ENST00000462324 MRC1P22897 1456 aa17.18■□□□□ 0.34
PHGDH-203ENST00000462324 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
PHGDH-203ENST00000462324 ADAMTS7Q9UKP4 1686 aa17.17■□□□□ 0.34
PHGDH-203ENST00000462324 TXNRD1Q16881 649 aa17.17■□□□□ 0.34
PHGDH-203ENST00000462324 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
PHGDH-203ENST00000462324 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
PHGDH-203ENST00000462324 EP400Q96L91 3159 aa17.17■□□□□ 0.34
PHGDH-203ENST00000462324 SCN11AQ9UI33 1791 aa17.16■□□□□ 0.34
PHGDH-203ENST00000462324 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
PHGDH-203ENST00000462324 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
PHGDH-203ENST00000462324 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
PHGDH-203ENST00000462324 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
PHGDH-203ENST00000462324 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
PHGDH-203ENST00000462324 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
PHGDH-203ENST00000462324 CCNL1Q9UK58 526 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-203ENST00000462324 LOC102724428A0A0B4J2F2 783 aa17.14■□□□□ 0.33
PHGDH-203ENST00000462324 SIK1P57059 783 aa17.14■□□□□ 0.33
PHGDH-203ENST00000462324 GNAI1P63096 354 aa17.14■□□□□ 0.33
PHGDH-203ENST00000462324 PROM2Q8N271 834 aa17.14■□□□□ 0.33
PHGDH-203ENST00000462324 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
PHGDH-203ENST00000462324 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-203ENST00000462324 CHL1O00533 1208 aa17.13■□□□□ 0.33
PHGDH-203ENST00000462324 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
PHGDH-203ENST00000462324 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
PHGDH-203ENST00000462324 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
PHGDH-203ENST00000462324 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
PHGDH-203ENST00000462324 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
PHGDH-203ENST00000462324 TSPYL4Q9UJ04 414 aa17.13■□□□□ 0.33
PHGDH-203ENST00000462324 IL16Q14005 1332 aa17.13■□□□□ 0.33
PHGDH-203ENST00000462324 TNS1Q9HBL0 1735 aaKnown RBP17.13■□□□□ 0.33
PHGDH-203ENST00000462324 NBPF14Q5TI25 921 aa17.12■□□□□ 0.33
PHGDH-203ENST00000462324 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-203ENST00000462324 MIS18AQ9NYP9 233 aa17.12■□□□□ 0.33
PHGDH-203ENST00000462324 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
PHGDH-203ENST00000462324 BTAF1O14981 1849 aa17.12■□□□□ 0.33
PHGDH-203ENST00000462324 ITGB4P16144 1822 aa17.12■□□□□ 0.33
PHGDH-203ENST00000462324 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
PHGDH-203ENST00000462324 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
PHGDH-203ENST00000462324 ZNF853P0CG23 659 aa17.1■□□□□ 0.33
PHGDH-203ENST00000462324 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
PHGDH-203ENST00000462324 KCNQ3O43525 872 aa17.09■□□□□ 0.33
PHGDH-203ENST00000462324 ZNF496Q96IT1 587 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-203ENST00000462324 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
PHGDH-203ENST00000462324 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
PHGDH-203ENST00000462324 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
PHGDH-203ENST00000462324 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
PHGDH-203ENST00000462324 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-203ENST00000462324 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 HEG1Q9ULI3 1381 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 STARD3NLO95772 234 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 KCNQ4P56696 695 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
PHGDH-203ENST00000462324 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
PHGDH-203ENST00000462324 ITPK1Q13572 414 aa17.06■□□□□ 0.32
PHGDH-203ENST00000462324 STK32BQ9NY57 414 aa17.06■□□□□ 0.32
PHGDH-203ENST00000462324 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
PHGDH-203ENST00000462324 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
PHGDH-203ENST00000462324 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-203ENST00000462324 GIGYF1O75420 1035 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-203ENST00000462324 DNAJC10Q8IXB1 793 aa17.04■□□□□ 0.32
PHGDH-203ENST00000462324 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
PHGDH-203ENST00000462324 E9PSI1 815 aa17.03■□□□□ 0.32
PHGDH-203ENST00000462324 CYP19A1P11511 503 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-203ENST00000462324 SLC15A2Q16348 729 aa17.03■□□□□ 0.32
PHGDH-203ENST00000462324 LINC00116Q8NCU8 138 aa17.03■□□□□ 0.32
PHGDH-203ENST00000462324 AK7Q96M32 723 aa17.03■□□□□ 0.32
PHGDH-203ENST00000462324 LY75O60449 1722 aa17.03■□□□□ 0.32
PHGDH-203ENST00000462324 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
PHGDH-203ENST00000462324 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
PHGDH-203ENST00000462324 CNTNAP4Q9C0A0 1308 aa17.02■□□□□ 0.32
PHGDH-203ENST00000462324 HOXB7P09629 217 aa17.02■□□□□ 0.32
PHGDH-203ENST00000462324 AKT1S1Q96B36 256 aa17.02■□□□□ 0.32
PHGDH-203ENST00000462324 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
PHGDH-203ENST00000462324 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-203ENST00000462324 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
PHGDH-203ENST00000462324 CRKLP46109 303 aaKnown RBP17.01■□□□□ 0.31
PHGDH-203ENST00000462324 FLAD1Q8NFF5 587 aa17.01■□□□□ 0.31
PHGDH-203ENST00000462324 CCDC87Q9NVE4 849 aa17.01■□□□□ 0.31
PHGDH-203ENST00000462324 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
PHGDH-203ENST00000462324 RPS6KA4O75676 772 aa17■□□□□ 0.31
PHGDH-203ENST00000462324 SLFN5Q08AF3 891 aa17■□□□□ 0.31
PHGDH-203ENST00000462324 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
PHGDH-203ENST00000462324 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
PHGDH-203ENST00000462324 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
PHGDH-203ENST00000462324 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
PHGDH-203ENST00000462324 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
PHGDH-203ENST00000462324 RREB1Q92766 1687 aa16.99■□□□□ 0.31
PHGDH-203ENST00000462324 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
PHGDH-203ENST00000462324 GNPATO15228 680 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms