RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 VAMP4O75379 141 aa25.63■■□□□ 1.69
PTPN18-207ENST00000462321 KDM3BQ7LBC6 1761 aa25.63■■□□□ 1.69
PTPN18-207ENST00000462321 BCAR3O75815 825 aa25.63■■□□□ 1.69
PTPN18-207ENST00000462321 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.62■■□□□ 1.69
PTPN18-207ENST00000462321 DDB1Q16531 1140 aa25.61■■□□□ 1.69
PTPN18-207ENST00000462321 ALDH1L2Q3SY69 923 aa25.61■■□□□ 1.69
PTPN18-207ENST00000462321 ATRNO75882 1429 aa25.61■■□□□ 1.69
PTPN18-207ENST00000462321 ERVV-2B6SEH9 535 aa25.6■■□□□ 1.69
PTPN18-207ENST00000462321 SOS1Q07889 1333 aaPredicted RBP25.6■■□□□ 1.69
PTPN18-207ENST00000462321 FKBP8Q14318 412 aa25.6■■□□□ 1.69
PTPN18-207ENST00000462321 KRT24Q2M2I5 525 aa25.6■■□□□ 1.69
PTPN18-207ENST00000462321 ELL2O00472 640 aaPredicted RBP25.59■■□□□ 1.69
PTPN18-207ENST00000462321 CABP4P57796 275 aa25.59■■□□□ 1.69
PTPN18-207ENST00000462321 SSH1Q8WYL5 1049 aa25.59■■□□□ 1.69
PTPN18-207ENST00000462321 FAM98CQ17RN3 349 aaKnown RBP25.58■■□□□ 1.69
PTPN18-207ENST00000462321 NFATC2IPQ8NCF5 419 aa25.58■■□□□ 1.69
PTPN18-207ENST00000462321 SMC4Q9NTJ3 1288 aa25.58■■□□□ 1.69
PTPN18-207ENST00000462321 TRPC5Q9UL62 973 aaPredicted RBP25.58■■□□□ 1.69
PTPN18-207ENST00000462321 EIF4A1P60842 406 aaKnown RBP25.57■■□□□ 1.68
PTPN18-207ENST00000462321 IRX6P78412 446 aaPredicted RBP25.57■■□□□ 1.68
PTPN18-207ENST00000462321 BCL2L13Q9BXK5 485 aa25.57■■□□□ 1.68
PTPN18-207ENST00000462321 PLIN1O60240 522 aa25.56■■□□□ 1.68
PTPN18-207ENST00000462321 GJD4Q96KN9 370 aaPredicted RBP25.56■■□□□ 1.68
PTPN18-207ENST00000462321 GLI3P10071 1580 aa25.56■■□□□ 1.68
PTPN18-207ENST00000462321 BRPF1P55201 1214 aaPredicted RBP25.55■■□□□ 1.68
PTPN18-207ENST00000462321 TOGARAM1Q9Y4F4 1720 aa25.55■■□□□ 1.68
PTPN18-207ENST00000462321 KCNQ3O43525 872 aa25.54■■□□□ 1.68
PTPN18-207ENST00000462321 THSD7AQ9UPZ6 1657 aa25.54■■□□□ 1.68
PTPN18-207ENST00000462321 ZNF790Q6PG37 636 aa25.54■■□□□ 1.68
PTPN18-207ENST00000462321 HOXB7P09629 217 aa25.53■■□□□ 1.68
PTPN18-207ENST00000462321 KIF16BQ96L93 1317 aa25.53■■□□□ 1.68
PTPN18-207ENST00000462321 ERICH6BQ5W0A0 696 aa25.52■■□□□ 1.68
PTPN18-207ENST00000462321 HEG1Q9ULI3 1381 aa25.52■■□□□ 1.68
PTPN18-207ENST00000462321 CANXP27824 592 aaKnown RBP25.51■■□□□ 1.68
PTPN18-207ENST00000462321 MRPL50Q8N5N7 158 aaKnown RBP25.5■■□□□ 1.67
PTPN18-207ENST00000462321 MARCH10Q8NA82 808 aaPredicted RBP25.5■■□□□ 1.67
PTPN18-207ENST00000462321 FRAT1Q92837 279 aaPredicted RBP25.5■■□□□ 1.67
PTPN18-207ENST00000462321 SLC39A6Q13433 755 aa25.49■■□□□ 1.67
PTPN18-207ENST00000462321 TTC5Q8N0Z6 440 aa25.49■■□□□ 1.67
PTPN18-207ENST00000462321 TMOD3Q9NYL9 352 aa25.49■■□□□ 1.67
PTPN18-207ENST00000462321 QTRT2Q9H974 415 aaKnown RBP25.49■■□□□ 1.67
PTPN18-207ENST00000462321 CHMP4AQ9BY43 222 aa25.48■■□□□ 1.67
PTPN18-207ENST00000462321 PAPPAQ13219 1627 aa25.48■■□□□ 1.67
PTPN18-207ENST00000462321 A0A0G2JS52 829 aa25.47■■□□□ 1.67
PTPN18-207ENST00000462321 ONECUT3O60422 494 aaPredicted RBP25.47■■□□□ 1.67
PTPN18-207ENST00000462321 MYT1Q01538 1121 aa25.47■■□□□ 1.67
PTPN18-207ENST00000462321 PDE3AQ14432 1141 aa25.47■■□□□ 1.67
PTPN18-207ENST00000462321 ZKSCAN2Q63HK3 967 aa25.47■■□□□ 1.67
PTPN18-207ENST00000462321 C20orf194Q5TEA3 1177 aa25.46■■□□□ 1.67
PTPN18-207ENST00000462321 CCDC30Q5VVM6 783 aa25.46■■□□□ 1.67
PTPN18-207ENST00000462321 GIGYF1O75420 1035 aaPredicted RBP25.46■■□□□ 1.67
PTPN18-207ENST00000462321 ZNF772Q68DY9 489 aaPredicted RBP25.46■■□□□ 1.67
PTPN18-207ENST00000462321 NOB1Q9ULX3 412 aaKnown RBP25.46■■□□□ 1.67
PTPN18-207ENST00000462321 TCERG1O14776 1098 aaKnown RBP25.45■■□□□ 1.66
PTPN18-207ENST00000462321 IPO8O15397 1037 aaKnown RBP25.45■■□□□ 1.66
PTPN18-207ENST00000462321 BCL9O00512 1426 aa25.45■■□□□ 1.66
PTPN18-207ENST00000462321 HDGFL1Q5TGJ6 251 aa25.44■■□□□ 1.66
PTPN18-207ENST00000462321 FMNL2Q96PY5 1086 aa25.44■■□□□ 1.66
PTPN18-207ENST00000462321 DOT1LQ8TEK3 1739 aa25.44■■□□□ 1.66
PTPN18-207ENST00000462321 ATF7IPQ6VMQ6 1270 aa25.43■■□□□ 1.66
PTPN18-207ENST00000462321 PIGBQ92521 554 aa25.43■■□□□ 1.66
PTPN18-207ENST00000462321 ZNF496Q96IT1 587 aaPredicted RBP25.43■■□□□ 1.66
PTPN18-207ENST00000462321 STK31Q9BXU1 1019 aa25.43■■□□□ 1.66
PTPN18-207ENST00000462321 MS4A1P11836 297 aa25.43■■□□□ 1.66
PTPN18-207ENST00000462321 ARHGAP45Q92619 1136 aa25.43■■□□□ 1.66
PTPN18-207ENST00000462321 UBR2Q8IWV8 1755 aa25.42■■□□□ 1.66
PTPN18-207ENST00000462321 KCPQ6ZWJ8 1503 aa25.42■■□□□ 1.66
PTPN18-207ENST00000462321 TRIM27P14373 513 aa25.41■■□□□ 1.66
PTPN18-207ENST00000462321 ITGB4P16144 1822 aa25.41■■□□□ 1.66
PTPN18-207ENST00000462321 SLC4A2P04920 1241 aa25.4■■□□□ 1.66
PTPN18-207ENST00000462321 SNRPA1P09661 255 aaKnown RBP25.4■■□□□ 1.66
PTPN18-207ENST00000462321 CRBNQ96SW2 442 aa25.4■■□□□ 1.66
PTPN18-207ENST00000462321 PRIM1P49642 420 aaKnown RBP25.39■■□□□ 1.65
PTPN18-207ENST00000462321 SEPT12Q8IYM1 358 aa25.39■■□□□ 1.65
PTPN18-207ENST00000462321 DZIP1LQ8IYY4 767 aaKnown RBP25.39■■□□□ 1.65
PTPN18-207ENST00000462321 PTPRCP08575 1304 aa25.38■■□□□ 1.65
PTPN18-207ENST00000462321 EIF2S2P20042 333 aaKnown RBP25.38■■□□□ 1.65
PTPN18-207ENST00000462321 FTSJ3Q8IY81 847 aaKnown RBP25.38■■□□□ 1.65
PTPN18-207ENST00000462321 EXOC6Q8TAG9 804 aa25.38■■□□□ 1.65
PTPN18-207ENST00000462321 NECTIN2Q92692 538 aa25.38■■□□□ 1.65
PTPN18-207ENST00000462321 SYTL4Q96C24 671 aaPredicted RBP25.38■■□□□ 1.65
PTPN18-207ENST00000462321 PANK1Q8TE04 598 aa25.37■■□□□ 1.65
PTPN18-207ENST00000462321 TNNQ9UQP3 1299 aa25.37■■□□□ 1.65
PTPN18-207ENST00000462321 C5P01031 1676 aa25.37■■□□□ 1.65
PTPN18-207ENST00000462321 PRAMEF22A3QJZ6 481 aa25.37■■□□□ 1.65
PTPN18-207ENST00000462321 API5Q9BZZ5 524 aaKnown RBP25.37■■□□□ 1.65
PTPN18-207ENST00000462321 ATG3Q9NT62 314 aa25.37■■□□□ 1.65
PTPN18-207ENST00000462321 RLBP1P12271 317 aa25.36■■□□□ 1.65
PTPN18-207ENST00000462321 CLUAP1Q96AJ1 413 aa25.36■■□□□ 1.65
PTPN18-207ENST00000462321 ASAP1Q9ULH1 1129 aa25.36■■□□□ 1.65
PTPN18-207ENST00000462321 RBM6P78332 1123 aaKnown RBP25.35■■□□□ 1.65
PTPN18-207ENST00000462321 ACSBG1Q96GR2 724 aa25.35■■□□□ 1.65
PTPN18-207ENST00000462321 CHPF2Q9P2E5 772 aa25.34■■□□□ 1.65
PTPN18-207ENST00000462321 DBF4Q9UBU7 674 aaPredicted RBP25.34■■□□□ 1.65
PTPN18-207ENST00000462321 LAMB4A4D0S4 1761 aa25.33■■□□□ 1.65
PTPN18-207ENST00000462321 PPP4R2Q9NY27 417 aa25.33■■□□□ 1.65
PTPN18-207ENST00000462321 PTCD1O75127 700 aaKnown RBP25.32■■□□□ 1.64
PTPN18-207ENST00000462321 VSIG10Q8N0Z9 540 aa25.32■■□□□ 1.64
PTPN18-207ENST00000462321 COG6Q9Y2V7 657 aa25.32■■□□□ 1.64
PTPN18-207ENST00000462321 RGS12O14924 1447 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms