RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 LINC00116Q8NCU8 138 aa18.54■□□□□ 0.56
PCOLCE-203ENST00000462260 UBR3Q6ZT12 1888 aa18.54■□□□□ 0.56
PCOLCE-203ENST00000462260 MSH5O43196 834 aa18.53■□□□□ 0.56
PCOLCE-203ENST00000462260 ATP6V1AP38606 617 aa18.53■□□□□ 0.56
PCOLCE-203ENST00000462260 CABP4P57796 275 aa18.53■□□□□ 0.56
PCOLCE-203ENST00000462260 AMIGO3Q86WK7 504 aa18.53■□□□□ 0.56
PCOLCE-203ENST00000462260 AK7Q96M32 723 aa18.53■□□□□ 0.56
PCOLCE-203ENST00000462260 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
PCOLCE-203ENST00000462260 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
PCOLCE-203ENST00000462260 ZNF831Q5JPB2 1677 aa18.52■□□□□ 0.56
PCOLCE-203ENST00000462260 SCN11AQ9UI33 1791 aa18.52■□□□□ 0.55
PCOLCE-203ENST00000462260 SLC4A9Q96Q91 983 aa18.51■□□□□ 0.55
PCOLCE-203ENST00000462260 SSFA2P28290 1259 aa18.5■□□□□ 0.55
PCOLCE-203ENST00000462260 NFATC2IPQ8NCF5 419 aa18.5■□□□□ 0.55
PCOLCE-203ENST00000462260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.48■□□□□ 0.55
PCOLCE-203ENST00000462260 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
PCOLCE-203ENST00000462260 MSL1Q68DK7 614 aa18.48■□□□□ 0.55
PCOLCE-203ENST00000462260 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
PCOLCE-203ENST00000462260 UTRNP46939 3433 aa18.47■□□□□ 0.55
PCOLCE-203ENST00000462260 PHF14O94880 888 aa18.47■□□□□ 0.55
PCOLCE-203ENST00000462260 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
PCOLCE-203ENST00000462260 LGR6Q9HBX8 967 aa18.47■□□□□ 0.55
PCOLCE-203ENST00000462260 COL5A3P25940 1745 aaPredicted RBP18.46■□□□□ 0.55
PCOLCE-203ENST00000462260 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
PCOLCE-203ENST00000462260 GNPATO15228 680 aa18.46■□□□□ 0.55
PCOLCE-203ENST00000462260 RNMTO43148 476 aaKnown RBP18.46■□□□□ 0.55
PCOLCE-203ENST00000462260 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
PCOLCE-203ENST00000462260 ADAMTS7Q9UKP4 1686 aa18.46■□□□□ 0.55
PCOLCE-203ENST00000462260 MRC1P22897 1456 aa18.46■□□□□ 0.54
PCOLCE-203ENST00000462260 VIRMAQ69YN4 1812 aaKnown RBP18.45■□□□□ 0.54
PCOLCE-203ENST00000462260 PPP2R1AP30153 589 aa18.45■□□□□ 0.54
PCOLCE-203ENST00000462260 RC3H1Q5TC82 1133 aaKnown RBP18.45■□□□□ 0.54
PCOLCE-203ENST00000462260 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
PCOLCE-203ENST00000462260 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-203ENST00000462260 KLHL34Q8N239 644 aa18.44■□□□□ 0.54
PCOLCE-203ENST00000462260 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
PCOLCE-203ENST00000462260 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
PCOLCE-203ENST00000462260 MYH14Q7Z406 1995 aaKnown RBP18.42■□□□□ 0.54
PCOLCE-203ENST00000462260 CICQ96RK0 1608 aaPredicted RBP18.42■□□□□ 0.54
PCOLCE-203ENST00000462260 YY1P25490 414 aa18.42■□□□□ 0.54
PCOLCE-203ENST00000462260 NLGN2Q8NFZ4 835 aa18.42■□□□□ 0.54
PCOLCE-203ENST00000462260 TJP1Q07157 1748 aa18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 GOLGB1Q14789 3259 aaKnown RBP18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 ADRA2BP18089 450 aa18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
PCOLCE-203ENST00000462260 ARHGEF1Q92888 912 aaKnown RBP18.39■□□□□ 0.53
PCOLCE-203ENST00000462260 CD2APQ9Y5K6 639 aa18.39■□□□□ 0.53
PCOLCE-203ENST00000462260 GNAT3A8MTJ3 354 aa18.38■□□□□ 0.53
PCOLCE-203ENST00000462260 PRKAR2BP31323 418 aa18.38■□□□□ 0.53
PCOLCE-203ENST00000462260 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
PCOLCE-203ENST00000462260 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
PCOLCE-203ENST00000462260 PHACTR3Q96KR7 559 aa18.38■□□□□ 0.53
PCOLCE-203ENST00000462260 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
PCOLCE-203ENST00000462260 GPR162Q16538 588 aa18.37■□□□□ 0.53
PCOLCE-203ENST00000462260 IL17REQ8NFR9 667 aa18.37■□□□□ 0.53
PCOLCE-203ENST00000462260 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
PCOLCE-203ENST00000462260 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCOLCE-203ENST00000462260 CHD4Q14839 1912 aa18.35■□□□□ 0.53
PCOLCE-203ENST00000462260 FCHSD2O94868 740 aa18.35■□□□□ 0.53
PCOLCE-203ENST00000462260 DNAJC10Q8IXB1 793 aa18.35■□□□□ 0.53
PCOLCE-203ENST00000462260 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
PCOLCE-203ENST00000462260 C4AP0C0L4 1744 aa18.35■□□□□ 0.53
PCOLCE-203ENST00000462260 CEMIPQ8WUJ3 1361 aa18.34■□□□□ 0.53
PCOLCE-203ENST00000462260 GYS1P13807 737 aa18.34■□□□□ 0.53
PCOLCE-203ENST00000462260 RFC4P35249 363 aa18.34■□□□□ 0.53
PCOLCE-203ENST00000462260 INTS5Q6P9B9 1019 aaKnown RBP18.34■□□□□ 0.53
PCOLCE-203ENST00000462260 NLGN1Q8N2Q7 840 aa18.34■□□□□ 0.53
PCOLCE-203ENST00000462260 SIPA1L3O60292 1781 aaPredicted RBP18.34■□□□□ 0.53
PCOLCE-203ENST00000462260 MMP10P09238 476 aa18.33■□□□□ 0.52
PCOLCE-203ENST00000462260 CYP19A1P11511 503 aaPredicted RBP18.33■□□□□ 0.52
PCOLCE-203ENST00000462260 TEFQ10587 303 aa18.33■□□□□ 0.52
PCOLCE-203ENST00000462260 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
PCOLCE-203ENST00000462260 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
PCOLCE-203ENST00000462260 CCDC87Q9NVE4 849 aa18.32■□□□□ 0.52
PCOLCE-203ENST00000462260 YBX3P16989 372 aaKnown RBP eCLIP18.31■□□□□ 0.52
PCOLCE-203ENST00000462260 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
PCOLCE-203ENST00000462260 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
PCOLCE-203ENST00000462260 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
PCOLCE-203ENST00000462260 USP42Q9H9J4 1324 aaKnown RBP18.29■□□□□ 0.52
PCOLCE-203ENST00000462260 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
PCOLCE-203ENST00000462260 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
PCOLCE-203ENST00000462260 KIF13BQ9NQT8 1826 aa18.28■□□□□ 0.52
PCOLCE-203ENST00000462260 GRIN3BO60391 1043 aa18.28■□□□□ 0.52
PCOLCE-203ENST00000462260 ZBTB1Q9Y2K1 713 aa18.28■□□□□ 0.52
PCOLCE-203ENST00000462260 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
PCOLCE-203ENST00000462260 DDX10Q13206 875 aaKnown RBP18.27■□□□□ 0.52
PCOLCE-203ENST00000462260 FKBP8Q14318 412 aa18.27■□□□□ 0.52
PCOLCE-203ENST00000462260 RALBP1Q15311 655 aa18.27■□□□□ 0.52
PCOLCE-203ENST00000462260 C10orf71Q711Q0 1435 aa18.26■□□□□ 0.51
PCOLCE-203ENST00000462260 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
PCOLCE-203ENST00000462260 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 STARD3NLO95772 234 aa18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 MCM10Q7L590 875 aa18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 ZNF784Q8NCA9 323 aaPredicted RBP18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms