RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TRMT2AQ8IZ69 625 aaKnown RBP17.57■□□□□ 0.4
PBRM1-219ENST00000462207 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
PBRM1-219ENST00000462207 SLC52A2Q9HAB3 445 aa17.57■□□□□ 0.4
PBRM1-219ENST00000462207 MBIPQ9NS73 344 aa17.57■□□□□ 0.4
PBRM1-219ENST00000462207 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
PBRM1-219ENST00000462207 GNAI1P63096 354 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 NFATC2IPQ8NCF5 419 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 CHL1O00533 1208 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 CABP4P57796 275 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
PBRM1-219ENST00000462207 ACSBG1Q96GR2 724 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 TSPYL4Q9UJ04 414 aa17.55■□□□□ 0.4
PBRM1-219ENST00000462207 ITGB4P16144 1822 aa17.54■□□□□ 0.4
PBRM1-219ENST00000462207 KCNQ3O43525 872 aa17.53■□□□□ 0.4
PBRM1-219ENST00000462207 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
PBRM1-219ENST00000462207 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
PBRM1-219ENST00000462207 PRIM1P49642 420 aaKnown RBP17.52■□□□□ 0.4
PBRM1-219ENST00000462207 SLC39A6Q13433 755 aa17.52■□□□□ 0.4
PBRM1-219ENST00000462207 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
PBRM1-219ENST00000462207 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.4
PBRM1-219ENST00000462207 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
PBRM1-219ENST00000462207 PAPPAQ13219 1627 aa17.51■□□□□ 0.39
PBRM1-219ENST00000462207 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
PBRM1-219ENST00000462207 TMOD3Q9NYL9 352 aa17.51■□□□□ 0.39
PBRM1-219ENST00000462207 BCL9O00512 1426 aa17.5■□□□□ 0.39
PBRM1-219ENST00000462207 KCNQ2O43526 872 aa17.5■□□□□ 0.39
PBRM1-219ENST00000462207 PIGBQ92521 554 aa17.5■□□□□ 0.39
PBRM1-219ENST00000462207 PTF1AQ7RTS3 328 aa17.49■□□□□ 0.39
PBRM1-219ENST00000462207 NHSQ6T4R5 1651 aa17.49■□□□□ 0.39
PBRM1-219ENST00000462207 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
PBRM1-219ENST00000462207 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
PBRM1-219ENST00000462207 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
PBRM1-219ENST00000462207 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
PBRM1-219ENST00000462207 BABAM1Q9NWV8 329 aa17.47■□□□□ 0.39
PBRM1-219ENST00000462207 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
PBRM1-219ENST00000462207 ASAP1Q9ULH1 1129 aa17.47■□□□□ 0.39
PBRM1-219ENST00000462207 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
PBRM1-219ENST00000462207 KAT6BQ8WYB5 2073 aa17.46■□□□□ 0.39
PBRM1-219ENST00000462207 UBR2Q8IWV8 1755 aa17.46■□□□□ 0.39
PBRM1-219ENST00000462207 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
PBRM1-219ENST00000462207 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
PBRM1-219ENST00000462207 ATG3Q9NT62 314 aa17.45■□□□□ 0.38
PBRM1-219ENST00000462207 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
PBRM1-219ENST00000462207 C5P01031 1676 aa17.44■□□□□ 0.38
PBRM1-219ENST00000462207 BTAF1O14981 1849 aa17.44■□□□□ 0.38
PBRM1-219ENST00000462207 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
PBRM1-219ENST00000462207 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
PBRM1-219ENST00000462207 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
PBRM1-219ENST00000462207 FAM196AQ6ZSG2 479 aa17.43■□□□□ 0.38
PBRM1-219ENST00000462207 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
PBRM1-219ENST00000462207 VAMP4O75379 141 aa17.41■□□□□ 0.38
PBRM1-219ENST00000462207 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
PBRM1-219ENST00000462207 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
PBRM1-219ENST00000462207 TRIM37O94972 964 aa17.4■□□□□ 0.38
PBRM1-219ENST00000462207 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
PBRM1-219ENST00000462207 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
PBRM1-219ENST00000462207 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
PBRM1-219ENST00000462207 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
PBRM1-219ENST00000462207 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
PBRM1-219ENST00000462207 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
PBRM1-219ENST00000462207 RARSP54136 660 aaKnown RBP17.38■□□□□ 0.37
PBRM1-219ENST00000462207 SLC4A9Q96Q91 983 aa17.38■□□□□ 0.37
PBRM1-219ENST00000462207 BCL11BQ9C0K0 894 aaPredicted RBP17.37■□□□□ 0.37
PBRM1-219ENST00000462207 LAMB4A4D0S4 1761 aa17.37■□□□□ 0.37
PBRM1-219ENST00000462207 TJP1Q07157 1748 aa17.37■□□□□ 0.37
PBRM1-219ENST00000462207 BCAR3O75815 825 aa17.37■□□□□ 0.37
PBRM1-219ENST00000462207 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
PBRM1-219ENST00000462207 SSH1Q8WYL5 1049 aa17.37■□□□□ 0.37
PBRM1-219ENST00000462207 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
PBRM1-219ENST00000462207 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
PBRM1-219ENST00000462207 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
PBRM1-219ENST00000462207 HDGFL1Q5TGJ6 251 aa17.35■□□□□ 0.37
PBRM1-219ENST00000462207 EP400Q96L91 3159 aa17.35■□□□□ 0.37
PBRM1-219ENST00000462207 HOXB7P09629 217 aa17.35■□□□□ 0.37
PBRM1-219ENST00000462207 SMARCC1Q92922 1105 aaPredicted RBP17.35■□□□□ 0.37
PBRM1-219ENST00000462207 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
PBRM1-219ENST00000462207 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
PBRM1-219ENST00000462207 DNAJC10Q8IXB1 793 aa17.34■□□□□ 0.37
PBRM1-219ENST00000462207 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
PBRM1-219ENST00000462207 LOC102724428A0A0B4J2F2 783 aa17.33■□□□□ 0.37
PBRM1-219ENST00000462207 KCNQ4P56696 695 aa17.33■□□□□ 0.37
PBRM1-219ENST00000462207 SIK1P57059 783 aa17.33■□□□□ 0.37
PBRM1-219ENST00000462207 LY75O60449 1722 aa17.33■□□□□ 0.36
PBRM1-219ENST00000462207 SOS1Q07889 1333 aaPredicted RBP17.33■□□□□ 0.36
PBRM1-219ENST00000462207 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
PBRM1-219ENST00000462207 ANXA1P04083 346 aa17.32■□□□□ 0.36
PBRM1-219ENST00000462207 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
PBRM1-219ENST00000462207 ITPK1Q13572 414 aa17.32■□□□□ 0.36
PBRM1-219ENST00000462207 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
PBRM1-219ENST00000462207 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
PBRM1-219ENST00000462207 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
PBRM1-219ENST00000462207 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
PBRM1-219ENST00000462207 ATP6V1AP38606 617 aa17.31■□□□□ 0.36
PBRM1-219ENST00000462207 PROSER3Q2NL68 480 aa17.31■□□□□ 0.36
PBRM1-219ENST00000462207 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
PBRM1-219ENST00000462207 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
PBRM1-219ENST00000462207 PLIN1O60240 522 aa17.3■□□□□ 0.36
PBRM1-219ENST00000462207 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms