RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TOMM70O94826 608 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 GCP02774 474 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 LMO7Q8WWI1 1683 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 PIK3C2GO75747 1445 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 LRRC37A3O60309 1634 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 HTRA3P83110 453 aa8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 NUDT16Q96DE0 195 aaKnown RBP8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 CDCA7Q9BWT1 371 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 COL5A2P05997 1499 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
SMARCC1-204ENST00000462198 COL24A1Q17RW2 1714 aa8.6□□□□□ -1.03
SMARCC1-204ENST00000462198 DPY19L2Q6NUT2 758 aa8.6□□□□□ -1.03
SMARCC1-204ENST00000462198 NLRP13Q86W25 1043 aa8.6□□□□□ -1.03
SMARCC1-204ENST00000462198 TRAK1Q9UPV9 953 aa8.6□□□□□ -1.03
SMARCC1-204ENST00000462198 PNPLA7Q6ZV29 1317 aa8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 ZNF687Q8N1G0 1237 aa8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 ZFP91Q96JP5 570 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 MPHOSPH9Q99550 1183 aa8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 TOPAZ1Q8N9V7 1692 aa8.59□□□□□ -1.03
SMARCC1-204ENST00000462198 ACEP12821 1306 aa8.58□□□□□ -1.04
SMARCC1-204ENST00000462198 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
SMARCC1-204ENST00000462198 PSEN1P49768 467 aa8.58□□□□□ -1.04
SMARCC1-204ENST00000462198 BRPF1P55201 1214 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-204ENST00000462198 STK24Q9Y6E0 443 aa8.58□□□□□ -1.04
SMARCC1-204ENST00000462198 PCNTO95613 3336 aa8.58□□□□□ -1.04
SMARCC1-204ENST00000462198 PAPPAQ13219 1627 aa8.58□□□□□ -1.04
SMARCC1-204ENST00000462198 WDR90Q96KV7 1748 aa8.57□□□□□ -1.04
SMARCC1-204ENST00000462198 USP19O94966 1318 aa8.57□□□□□ -1.04
SMARCC1-204ENST00000462198 AXIN2Q9Y2T1 843 aa8.57□□□□□ -1.04
SMARCC1-204ENST00000462198 CD2APQ9Y5K6 639 aa8.57□□□□□ -1.04
SMARCC1-204ENST00000462198 WDR17Q8IZU2 1322 aa8.56□□□□□ -1.04
SMARCC1-204ENST00000462198 G3V3G9 751 aa8.56□□□□□ -1.04
SMARCC1-204ENST00000462198 RIMBP2O15034 1052 aa8.56□□□□□ -1.04
SMARCC1-204ENST00000462198 CARD10Q9BWT7 1032 aa8.56□□□□□ -1.04
SMARCC1-204ENST00000462198 QSER1Q2KHR3 1735 aa8.56□□□□□ -1.04
SMARCC1-204ENST00000462198 USP6P35125 1406 aa8.55□□□□□ -1.04
SMARCC1-204ENST00000462198 ARHGEF28Q8N1W1 1705 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-204ENST00000462198 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
SMARCC1-204ENST00000462198 CSB-PGBD3P0DP91 1061 aa8.55□□□□□ -1.04
SMARCC1-204ENST00000462198 KCNQ4P56696 695 aa8.55□□□□□ -1.04
SMARCC1-204ENST00000462198 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
SMARCC1-204ENST00000462198 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
SMARCC1-204ENST00000462198 BTAF1O14981 1849 aa8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 POLR3AO14802 1390 aaPredicted RBP8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 MSL1Q68DK7 614 aa8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 COL23A1Q86Y22 540 aaPredicted RBP8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 RBM46Q8TBY0 533 aaKnown RBP8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 ZSWIM6Q9HCJ5 1215 aa8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 NMRK2Q9NPI5 230 aa8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 WNK3Q9BYP7 1800 aa8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 ITSN1Q15811 1721 aa8.54□□□□□ -1.04
SMARCC1-204ENST00000462198 NHSQ6T4R5 1651 aa8.53□□□□□ -1.04
SMARCC1-204ENST00000462198 HSPA1AP0DMV8 641 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-204ENST00000462198 HSPA1BP0DMV9 641 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-204ENST00000462198 NLRP6P59044 892 aa8.53□□□□□ -1.04
SMARCC1-204ENST00000462198 C16orf71Q8IYS4 520 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-204ENST00000462198 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
SMARCC1-204ENST00000462198 RGPD5Q99666 1765 aa8.53□□□□□ -1.04
SMARCC1-204ENST00000462198 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.04
SMARCC1-204ENST00000462198 FSTL1Q12841 308 aa8.52□□□□□ -1.05
SMARCC1-204ENST00000462198 COL18A1P39060 1754 aa8.52□□□□□ -1.05
SMARCC1-204ENST00000462198 CENPBP07199 599 aaPredicted RBP8.51□□□□□ -1.05
SMARCC1-204ENST00000462198 PDAP1Q13442 181 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-204ENST00000462198 IGSF1Q8N6C5 1336 aa8.51□□□□□ -1.05
SMARCC1-204ENST00000462198 ARHGEF25Q86VW2 580 aa8.49□□□□□ -1.05
SMARCC1-204ENST00000462198 WDR70Q9NW82 654 aa8.49□□□□□ -1.05
SMARCC1-204ENST00000462198 CCDC7Q96M83 1385 aa8.48□□□□□ -1.05
SMARCC1-204ENST00000462198 TNS2Q63HR2 1409 aa8.48□□□□□ -1.05
SMARCC1-204ENST00000462198 FAM161AQ3B820 660 aa8.48□□□□□ -1.05
SMARCC1-204ENST00000462198 GPR153Q6NV75 609 aa8.48□□□□□ -1.05
SMARCC1-204ENST00000462198 ADGRB1O14514 1584 aa8.48□□□□□ -1.05
SMARCC1-204ENST00000462198 IL2RBP14784 551 aa8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 PRIM1P49642 420 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 ARHGAP27Q6ZUM4 889 aa8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 ZC3H15Q8WU90 426 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 RRAGCQ9HB90 399 aa8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 CABP2Q9NPB3 220 aa8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 CCNL1Q9UK58 526 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-204ENST00000462198 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.05
SMARCC1-204ENST00000462198 SOX12O15370 315 aa8.46□□□□□ -1.06
SMARCC1-204ENST00000462198 KCNH5Q8NCM2 988 aa8.46□□□□□ -1.06
SMARCC1-204ENST00000462198 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
SMARCC1-204ENST00000462198 TRPM1Q7Z4N2 1603 aa8.45□□□□□ -1.06
SMARCC1-204ENST00000462198 SMC1BQ8NDV3 1235 aa8.45□□□□□ -1.06
SMARCC1-204ENST00000462198 FLAD1Q8NFF5 587 aa8.45□□□□□ -1.06
SMARCC1-204ENST00000462198 ARHGEF1Q92888 912 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms