RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ITGB4P16144 1822 aa7.59□□□□□ -1.19
CLK1-207ENST00000461981 ADAMTS7Q9UKP4 1686 aa7.59□□□□□ -1.19
CLK1-207ENST00000461981 CHRNA2Q15822 529 aa7.59□□□□□ -1.2
CLK1-207ENST00000461981 SECISBP2LQ93073 1101 aaKnown RBP7.59□□□□□ -1.2
CLK1-207ENST00000461981 CLCN1P35523 988 aa7.58□□□□□ -1.2
CLK1-207ENST00000461981 PROM2Q8N271 834 aa7.58□□□□□ -1.2
CLK1-207ENST00000461981 CABP1Q9NZU7 370 aa7.58□□□□□ -1.2
CLK1-207ENST00000461981 FTSJ3Q8IY81 847 aaKnown RBP7.58□□□□□ -1.2
CLK1-207ENST00000461981 DLEC1Q9Y238 1755 aa7.58□□□□□ -1.2
CLK1-207ENST00000461981 C1QTNF8P60827 252 aa7.57□□□□□ -1.2
CLK1-207ENST00000461981 BRCA1P38398 1863 aaKnown RBP7.57□□□□□ -1.2
CLK1-207ENST00000461981 MAPK8IP2Q13387 824 aaPredicted RBP7.57□□□□□ -1.2
CLK1-207ENST00000461981 SYT17Q9BSW7 474 aa7.57□□□□□ -1.2
CLK1-207ENST00000461981 NRXN2Q9P2S2 1712 aa7.56□□□□□ -1.2
CLK1-207ENST00000461981 ADRA2BP18089 450 aa7.56□□□□□ -1.2
CLK1-207ENST00000461981 ARFGEF2Q9Y6D5 1785 aa7.56□□□□□ -1.2
CLK1-207ENST00000461981 PXDNLA1KZ92 1463 aa7.56□□□□□ -1.2
CLK1-207ENST00000461981 A0A1W2PP64 1363 aa7.56□□□□□ -1.2
CLK1-207ENST00000461981 FLT4P35916 1363 aa7.56□□□□□ -1.2
CLK1-207ENST00000461981 PCDH11XQ9BZA7 1347 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 PCDH11YQ9BZA8 1340 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 SAFB2Q14151 953 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLK1-207ENST00000461981 PDZRN3Q9UPQ7 1066 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 TULP1O00294 542 aaPredicted RBP7.55□□□□□ -1.2
CLK1-207ENST00000461981 RGL2O15211 777 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 ZNF784Q8NCA9 323 aaPredicted RBP7.55□□□□□ -1.2
CLK1-207ENST00000461981 C4AP0C0L4 1744 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 ANKRD24Q8TF21 1146 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 CABP2Q9NPB3 220 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 TMEM51Q9NW97 253 aa7.55□□□□□ -1.2
CLK1-207ENST00000461981 SSFA2P28290 1259 aa7.54□□□□□ -1.2
CLK1-207ENST00000461981 NBPF1Q3BBV0 1214 aa7.54□□□□□ -1.2
CLK1-207ENST00000461981 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
CLK1-207ENST00000461981 ANP32BQ92688 251 aaKnown RBP7.54□□□□□ -1.2
CLK1-207ENST00000461981 PNPLA7Q6ZV29 1317 aa7.54□□□□□ -1.2
CLK1-207ENST00000461981 PDE4AP27815 886 aa7.54□□□□□ -1.2
CLK1-207ENST00000461981 MRC1P22897 1456 aa7.54□□□□□ -1.2
CLK1-207ENST00000461981 L3MBTL2Q969R5 705 aa7.53□□□□□ -1.2
CLK1-207ENST00000461981 CSB-PGBD3P0DP91 1061 aa7.53□□□□□ -1.2
CLK1-207ENST00000461981 IFFO2Q5TF58 517 aa7.53□□□□□ -1.2
CLK1-207ENST00000461981 AXIN2Q9Y2T1 843 aa7.53□□□□□ -1.2
CLK1-207ENST00000461981 RGPD2P0DJD1 1756 aa7.53□□□□□ -1.2
CLK1-207ENST00000461981 FAM13BQ9NYF5 915 aa7.53□□□□□ -1.2
CLK1-207ENST00000461981 KDRP35968 1356 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 TPM2P07951 284 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 TEX2Q8IWB9 1127 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 ZCRB1Q8TBF4 217 aaKnown RBP7.52□□□□□ -1.21
CLK1-207ENST00000461981 FHDC1Q9C0D6 1143 aaPredicted RBP7.52□□□□□ -1.21
CLK1-207ENST00000461981 MEGF6O75095 1541 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 USP47Q96K76 1375 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 E9PSI1 815 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 GIGYF1O75420 1035 aaPredicted RBP7.52□□□□□ -1.21
CLK1-207ENST00000461981 HSP90AB1P08238 724 aaKnown RBP7.52□□□□□ -1.21
CLK1-207ENST00000461981 COG3Q96JB2 828 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 WDR90Q96KV7 1748 aa7.52□□□□□ -1.21
CLK1-207ENST00000461981 NCLP19338 710 aaKnown RBP7.51□□□□□ -1.21
CLK1-207ENST00000461981 HOXC9P31274 260 aa7.51□□□□□ -1.21
CLK1-207ENST00000461981 TGFB2P61812 414 aa7.51□□□□□ -1.21
CLK1-207ENST00000461981 PPP4R3BQ5MIZ7 849 aa7.51□□□□□ -1.21
CLK1-207ENST00000461981 L1TD1Q5T7N2 865 aaKnown RBP7.51□□□□□ -1.21
CLK1-207ENST00000461981 SMAP1Q8IYB5 467 aaPredicted RBP7.51□□□□□ -1.21
CLK1-207ENST00000461981 PANK2Q9BZ23 570 aa7.51□□□□□ -1.21
CLK1-207ENST00000461981 CNTNAP4Q9C0A0 1308 aa7.51□□□□□ -1.21
CLK1-207ENST00000461981 ATP10DQ9P241 1426 aa7.51□□□□□ -1.21
CLK1-207ENST00000461981 TATP17735 454 aaPredicted RBP7.5□□□□□ -1.21
CLK1-207ENST00000461981 SCN11AQ9UI33 1791 aa7.5□□□□□ -1.21
CLK1-207ENST00000461981 KDM6AO15550 1401 aaPredicted RBP7.5□□□□□ -1.21
CLK1-207ENST00000461981 KIAA1211Q6ZU35 1233 aa7.5□□□□□ -1.21
CLK1-207ENST00000461981 TJP1Q07157 1748 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 ZBTB22O15209 634 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 CDK11BP21127 795 aaKnown RBP7.49□□□□□ -1.21
CLK1-207ENST00000461981 FSTL1Q12841 308 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 TESK2Q96S53 571 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 APLP1P51693 650 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 ZNF827Q17R98 1081 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 CNPY4Q8N129 248 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 UBR2Q8IWV8 1755 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 RBM46Q8TBY0 533 aaKnown RBP7.49□□□□□ -1.21
CLK1-207ENST00000461981 BACH2Q9BYV9 841 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 SPG7Q9UQ90 795 aa7.49□□□□□ -1.21
CLK1-207ENST00000461981 KAT6BQ8WYB5 2073 aa7.48□□□□□ -1.21
CLK1-207ENST00000461981 XRCC6P12956 609 aaKnown RBP eCLIP7.48□□□□□ -1.21
CLK1-207ENST00000461981 TMF1P82094 1093 aa7.48□□□□□ -1.21
CLK1-207ENST00000461981 ERVV-2B6SEH9 535 aa7.48□□□□□ -1.21
CLK1-207ENST00000461981 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
CLK1-207ENST00000461981 PALLDQ8WX93 1383 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 ERBB4Q15303 1308 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 CERS3Q8IU89 383 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 ESPNB1AK53 854 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 HSPA6P17066 643 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 FAM9BQ8IZU0 186 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 DICER1Q9UPY3 1922 aaKnown RBP7.47□□□□□ -1.21
CLK1-207ENST00000461981 RAPGEF4Q8WZA2 1011 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 CARD11Q9BXL7 1154 aa7.47□□□□□ -1.21
CLK1-207ENST00000461981 CCNL1Q9UK58 526 aaPredicted RBP7.47□□□□□ -1.21
CLK1-207ENST00000461981 SCN7AQ01118 1682 aa7.46□□□□□ -1.21
CLK1-207ENST00000461981 TNNT2P45379 298 aaPredicted RBP7.46□□□□□ -1.22
CLK1-207ENST00000461981 DMTNQ08495 405 aa7.46□□□□□ -1.22
CLK1-207ENST00000461981 DNTTIP2Q5QJE6 756 aaKnown RBP7.46□□□□□ -1.22
CLK1-207ENST00000461981 NUTM2GQ5VZR2 741 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms