RNA–Protein interactions for RNA: ENST00000461673.1

UFL1-202, Transcript of UFM1 specific ligase 1, humanhuman

TSL 2

Gene UFL1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-202ENST00000461673 COL24A1Q17RW2 1714 aa24.24■■□□□ 1.47
UFL1-202ENST00000461673 RBM42Q9BTD8 480 aaKnown RBP24.22■■□□□ 1.47
UFL1-202ENST00000461673 KLHL34Q8N239 644 aa24.21■■□□□ 1.47
UFL1-202ENST00000461673 KDM6AO15550 1401 aaPredicted RBP24.2■■□□□ 1.46
UFL1-202ENST00000461673 AKAP4Q5JQC9 854 aa24.2■■□□□ 1.46
UFL1-202ENST00000461673 LINC00116Q8NCU8 138 aa24.2■■□□□ 1.46
UFL1-202ENST00000461673 NFATC2IPQ8NCF5 419 aa24.19■■□□□ 1.46
UFL1-202ENST00000461673 UBR3Q6ZT12 1888 aa24.19■■□□□ 1.46
UFL1-202ENST00000461673 SCN11AQ9UI33 1791 aa24.19■■□□□ 1.46
UFL1-202ENST00000461673 U2SURPO15042 1029 aaKnown RBP24.18■■□□□ 1.46
UFL1-202ENST00000461673 PHF14O94880 888 aa24.18■■□□□ 1.46
UFL1-202ENST00000461673 ITPK1Q13572 414 aa24.18■■□□□ 1.46
UFL1-202ENST00000461673 MSL1Q68DK7 614 aa24.17■■□□□ 1.46
UFL1-202ENST00000461673 CFAP53Q96M91 514 aa24.17■■□□□ 1.46
UFL1-202ENST00000461673 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
UFL1-202ENST00000461673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
UFL1-202ENST00000461673 SSFA2P28290 1259 aa24.16■■□□□ 1.46
UFL1-202ENST00000461673 VIRMAQ69YN4 1812 aaKnown RBP24.16■■□□□ 1.46
UFL1-202ENST00000461673 GNPATO15228 680 aa24.15■■□□□ 1.46
UFL1-202ENST00000461673 MTHFSDQ2M296 383 aaKnown RBP24.15■■□□□ 1.46
UFL1-202ENST00000461673 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
UFL1-202ENST00000461673 LGR6Q9HBX8 967 aa24.14■■□□□ 1.45
UFL1-202ENST00000461673 PTCD1O75127 700 aaKnown RBP24.13■■□□□ 1.45
UFL1-202ENST00000461673 YY1P25490 414 aa24.13■■□□□ 1.45
UFL1-202ENST00000461673 AMIGO3Q86WK7 504 aa24.13■■□□□ 1.45
UFL1-202ENST00000461673 ZNF831Q5JPB2 1677 aa24.13■■□□□ 1.45
UFL1-202ENST00000461673 SLC4A9Q96Q91 983 aa24.12■■□□□ 1.45
UFL1-202ENST00000461673 COL3A1P02461 1466 aaPredicted RBP24.12■■□□□ 1.45
UFL1-202ENST00000461673 RNMTO43148 476 aaKnown RBP24.11■■□□□ 1.45
UFL1-202ENST00000461673 RTCBQ9Y3I0 505 aaKnown RBP24.11■■□□□ 1.45
UFL1-202ENST00000461673 PPP2R1AP30153 589 aa24.1■■□□□ 1.45
UFL1-202ENST00000461673 TRAPPC3LQ5T215 181 aa24.1■■□□□ 1.45
UFL1-202ENST00000461673 RC3H1Q5TC82 1133 aaKnown RBP24.1■■□□□ 1.45
UFL1-202ENST00000461673 SLC52A2Q9HAB3 445 aa24.1■■□□□ 1.45
UFL1-202ENST00000461673 NUDCQ9Y266 331 aa24.1■■□□□ 1.45
UFL1-202ENST00000461673 GPR162Q16538 588 aa24.09■■□□□ 1.45
UFL1-202ENST00000461673 COL5A3P25940 1745 aaPredicted RBP24.08■■□□□ 1.45
UFL1-202ENST00000461673 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
UFL1-202ENST00000461673 CNTNAP4Q9C0A0 1308 aa24.06■■□□□ 1.44
UFL1-202ENST00000461673 RPS6KA4O75676 772 aa24.05■■□□□ 1.44
UFL1-202ENST00000461673 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
UFL1-202ENST00000461673 NLGN2Q8NFZ4 835 aa24.05■■□□□ 1.44
UFL1-202ENST00000461673 CD2APQ9Y5K6 639 aa24.04■■□□□ 1.44
UFL1-202ENST00000461673 CHD4Q14839 1912 aa24.04■■□□□ 1.44
UFL1-202ENST00000461673 MYH14Q7Z406 1995 aaKnown RBP24.03■■□□□ 1.44
UFL1-202ENST00000461673 GNAT3A8MTJ3 354 aa24.03■■□□□ 1.44
UFL1-202ENST00000461673 ADRA2BP18089 450 aa24.03■■□□□ 1.44
UFL1-202ENST00000461673 RFC4P35249 363 aa24.03■■□□□ 1.44
UFL1-202ENST00000461673 SLC39A6Q13433 755 aa24.03■■□□□ 1.44
UFL1-202ENST00000461673 ARHGEF1Q92888 912 aaKnown RBP24.03■■□□□ 1.44
UFL1-202ENST00000461673 U2AF1L5P0DN76 240 aaPredicted RBP24.02■■□□□ 1.44
UFL1-202ENST00000461673 PRKAR2BP31323 418 aa24.02■■□□□ 1.44
UFL1-202ENST00000461673 U2AF1Q01081 240 aaKnown RBP eCLIP24.02■■□□□ 1.44
UFL1-202ENST00000461673 CRKLP46109 303 aaKnown RBP24.01■■□□□ 1.43
UFL1-202ENST00000461673 NLGN1Q8N2Q7 840 aa24.01■■□□□ 1.43
UFL1-202ENST00000461673 ADAMTS7Q9UKP4 1686 aa24.01■■□□□ 1.43
UFL1-202ENST00000461673 TEFQ10587 303 aa24■■□□□ 1.43
UFL1-202ENST00000461673 RSPH6AQ9H0K4 717 aa24■■□□□ 1.43
UFL1-202ENST00000461673 MRC1P22897 1456 aa24■■□□□ 1.43
UFL1-202ENST00000461673 TJP1Q07157 1748 aa23.99■■□□□ 1.43
UFL1-202ENST00000461673 IL17REQ8NFR9 667 aa23.99■■□□□ 1.43
UFL1-202ENST00000461673 PHACTR3Q96KR7 559 aa23.99■■□□□ 1.43
UFL1-202ENST00000461673 FCHSD2O94868 740 aa23.98■■□□□ 1.43
UFL1-202ENST00000461673 DNAJC10Q8IXB1 793 aa23.98■■□□□ 1.43
UFL1-202ENST00000461673 TTC5Q8N0Z6 440 aa23.97■■□□□ 1.43
UFL1-202ENST00000461673 CICQ96RK0 1608 aaPredicted RBP23.97■■□□□ 1.43
UFL1-202ENST00000461673 MMP10P09238 476 aa23.96■■□□□ 1.43
UFL1-202ENST00000461673 GRIN3BO60391 1043 aa23.95■■□□□ 1.42
UFL1-202ENST00000461673 INTS5Q6P9B9 1019 aaKnown RBP23.95■■□□□ 1.42
UFL1-202ENST00000461673 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
UFL1-202ENST00000461673 CCDC87Q9NVE4 849 aa23.95■■□□□ 1.42
UFL1-202ENST00000461673 GYS1P13807 737 aa23.94■■□□□ 1.42
UFL1-202ENST00000461673 C4AP0C0L4 1744 aa23.93■■□□□ 1.42
UFL1-202ENST00000461673 CYP19A1P11511 503 aaPredicted RBP23.93■■□□□ 1.42
UFL1-202ENST00000461673 RTF1Q92541 710 aaKnown RBP23.93■■□□□ 1.42
UFL1-202ENST00000461673 NEFMP07197 916 aa23.92■■□□□ 1.42
UFL1-202ENST00000461673 PARP3Q9Y6F1 533 aa23.92■■□□□ 1.42
UFL1-202ENST00000461673 KCPQ6ZWJ8 1503 aa23.92■■□□□ 1.42
UFL1-202ENST00000461673 SIPA1L3O60292 1781 aaPredicted RBP23.91■■□□□ 1.42
UFL1-202ENST00000461673 YBX3P16989 372 aaKnown RBP eCLIP23.91■■□□□ 1.42
UFL1-202ENST00000461673 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
UFL1-202ENST00000461673 ZNF790Q6PG37 636 aa23.91■■□□□ 1.42
UFL1-202ENST00000461673 UBR2Q8IWV8 1755 aa23.91■■□□□ 1.42
UFL1-202ENST00000461673 ZPR1O75312 459 aa23.9■■□□□ 1.42
UFL1-202ENST00000461673 SRP68Q9UHB9 627 aaKnown RBP23.9■■□□□ 1.42
UFL1-202ENST00000461673 BTBD11A6QL63 1104 aa23.89■■□□□ 1.41
UFL1-202ENST00000461673 STARD3NLO95772 234 aa23.89■■□□□ 1.41
UFL1-202ENST00000461673 TEX13AQ9BXU3 409 aaPredicted RBP23.89■■□□□ 1.41
UFL1-202ENST00000461673 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
UFL1-202ENST00000461673 USP42Q9H9J4 1324 aaKnown RBP23.88■■□□□ 1.41
UFL1-202ENST00000461673 RALBP1Q15311 655 aa23.88■■□□□ 1.41
UFL1-202ENST00000461673 ZNF496Q96IT1 587 aaPredicted RBP23.88■■□□□ 1.41
UFL1-202ENST00000461673 SOS1Q07889 1333 aaPredicted RBP23.86■■□□□ 1.41
UFL1-202ENST00000461673 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
UFL1-202ENST00000461673 CANXP27824 592 aaKnown RBP23.86■■□□□ 1.41
UFL1-202ENST00000461673 FKBP8Q14318 412 aa23.86■■□□□ 1.41
UFL1-202ENST00000461673 FMNL2Q96PY5 1086 aa23.86■■□□□ 1.41
UFL1-202ENST00000461673 PNNQ9H307 717 aaKnown RBP23.86■■□□□ 1.41
UFL1-202ENST00000461673 ZBTB1Q9Y2K1 713 aa23.86■■□□□ 1.41
UFL1-202ENST00000461673 TGFB2P61812 414 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms