RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 IFNL2Q8IZJ0 200 aa19.86■□□□□ 0.77
TMEM39A-203ENST00000461654 PPP1R1BQ9UD71 204 aaPredicted RBP19.86■□□□□ 0.77
TMEM39A-203ENST00000461654 KDRP35968 1356 aa19.85■□□□□ 0.77
TMEM39A-203ENST00000461654 PHKG2P15735 406 aa19.85■□□□□ 0.77
TMEM39A-203ENST00000461654 GOLGA2Q08379 1002 aa19.85■□□□□ 0.77
TMEM39A-203ENST00000461654 NFE2L2Q16236 605 aa19.85■□□□□ 0.77
TMEM39A-203ENST00000461654 MPRIPQ6WCQ1 1025 aa19.85■□□□□ 0.77
TMEM39A-203ENST00000461654 CCNL1Q9UK58 526 aaPredicted RBP19.85■□□□□ 0.77
TMEM39A-203ENST00000461654 RIPK4P57078 832 aa19.84■□□□□ 0.77
TMEM39A-203ENST00000461654 LMOD3Q0VAK6 560 aa19.84■□□□□ 0.77
TMEM39A-203ENST00000461654 SLC16A10Q8TF71 515 aa19.84■□□□□ 0.77
TMEM39A-203ENST00000461654 WWC1Q8IX03 1113 aa19.83■□□□□ 0.77
TMEM39A-203ENST00000461654 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.77
TMEM39A-203ENST00000461654 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.77
TMEM39A-203ENST00000461654 SGIP1Q9BQI5 828 aa19.83■□□□□ 0.77
TMEM39A-203ENST00000461654 KCNQ4P56696 695 aa19.82■□□□□ 0.76
TMEM39A-203ENST00000461654 WDR63Q8IWG1 891 aa19.82■□□□□ 0.76
TMEM39A-203ENST00000461654 PIGBQ92521 554 aa19.82■□□□□ 0.76
TMEM39A-203ENST00000461654 ATF5Q9Y2D1 282 aaPredicted RBP19.82■□□□□ 0.76
TMEM39A-203ENST00000461654 ZNF521Q96K83 1311 aa19.81■□□□□ 0.76
TMEM39A-203ENST00000461654 AMOTQ4VCS5 1084 aa19.81■□□□□ 0.76
TMEM39A-203ENST00000461654 PLEKHO1Q53GL0 409 aaPredicted RBP19.81■□□□□ 0.76
TMEM39A-203ENST00000461654 PALLDQ8WX93 1383 aa19.81■□□□□ 0.76
TMEM39A-203ENST00000461654 QSER1Q2KHR3 1735 aa19.8■□□□□ 0.76
TMEM39A-203ENST00000461654 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
TMEM39A-203ENST00000461654 CALD1Q05682 793 aaKnown RBP19.8■□□□□ 0.76
TMEM39A-203ENST00000461654 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
TMEM39A-203ENST00000461654 TFCP2L1Q9NZI6 479 aa19.8■□□□□ 0.76
TMEM39A-203ENST00000461654 PNPLA7Q6ZV29 1317 aa19.79■□□□□ 0.76
TMEM39A-203ENST00000461654 HSP90AB1P08238 724 aaKnown RBP19.79■□□□□ 0.76
TMEM39A-203ENST00000461654 E9PSI1 815 aa19.78■□□□□ 0.76
TMEM39A-203ENST00000461654 TMOD3Q9NYL9 352 aa19.78■□□□□ 0.76
TMEM39A-203ENST00000461654 ITGB4P16144 1822 aa19.78■□□□□ 0.76
TMEM39A-203ENST00000461654 ERVV-2B6SEH9 535 aa19.77■□□□□ 0.76
TMEM39A-203ENST00000461654 DCAF5Q96JK2 942 aa19.77■□□□□ 0.76
TMEM39A-203ENST00000461654 CDCA7LQ96GN5 454 aa19.76■□□□□ 0.75
TMEM39A-203ENST00000461654 TRIM35Q9UPQ4 493 aa19.76■□□□□ 0.75
TMEM39A-203ENST00000461654 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
TMEM39A-203ENST00000461654 RTF1Q92541 710 aaKnown RBP19.75■□□□□ 0.75
TMEM39A-203ENST00000461654 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
TMEM39A-203ENST00000461654 MTHFSDQ2M296 383 aaKnown RBP19.74■□□□□ 0.75
TMEM39A-203ENST00000461654 FLAD1Q8NFF5 587 aa19.74■□□□□ 0.75
TMEM39A-203ENST00000461654 ARXQ96QS3 562 aa19.74■□□□□ 0.75
TMEM39A-203ENST00000461654 IL16Q14005 1332 aa19.74■□□□□ 0.75
TMEM39A-203ENST00000461654 LOC102724428A0A0B4J2F2 783 aa19.73■□□□□ 0.75
TMEM39A-203ENST00000461654 SIK1P57059 783 aa19.73■□□□□ 0.75
TMEM39A-203ENST00000461654 ZNF530Q6P9A1 599 aaPredicted RBP19.73■□□□□ 0.75
TMEM39A-203ENST00000461654 COL23A1Q86Y22 540 aaPredicted RBP19.73■□□□□ 0.75
TMEM39A-203ENST00000461654 SYT17Q9BSW7 474 aa19.73■□□□□ 0.75
TMEM39A-203ENST00000461654 ATG3Q9NT62 314 aa19.73■□□□□ 0.75
TMEM39A-203ENST00000461654 ASAP1Q9ULH1 1129 aa19.73■□□□□ 0.75
TMEM39A-203ENST00000461654 MAP3K5Q99683 1374 aa19.72■□□□□ 0.75
TMEM39A-203ENST00000461654 HTATSF1O43719 755 aaKnown RBP19.72■□□□□ 0.75
TMEM39A-203ENST00000461654 COL24A1Q17RW2 1714 aa19.72■□□□□ 0.75
TMEM39A-203ENST00000461654 C5P01031 1676 aa19.71■□□□□ 0.75
TMEM39A-203ENST00000461654 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
TMEM39A-203ENST00000461654 FHDC1Q9C0D6 1143 aaPredicted RBP19.71■□□□□ 0.75
TMEM39A-203ENST00000461654 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
TMEM39A-203ENST00000461654 C1orf141Q5JVX7 400 aa19.7■□□□□ 0.74
TMEM39A-203ENST00000461654 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
TMEM39A-203ENST00000461654 TUBGCP6Q96RT7 1819 aa19.69■□□□□ 0.74
TMEM39A-203ENST00000461654 KDM6AO15550 1401 aaPredicted RBP19.69■□□□□ 0.74
TMEM39A-203ENST00000461654 POLD1P28340 1107 aa19.69■□□□□ 0.74
TMEM39A-203ENST00000461654 DUSP27Q5VZP5 1158 aa19.69■□□□□ 0.74
TMEM39A-203ENST00000461654 TRMT2AQ8IZ69 625 aaKnown RBP19.69■□□□□ 0.74
TMEM39A-203ENST00000461654 CABP4P57796 275 aa19.68■□□□□ 0.74
TMEM39A-203ENST00000461654 GNAI1P63096 354 aa19.68■□□□□ 0.74
TMEM39A-203ENST00000461654 ATP6V1AP38606 617 aa19.67■□□□□ 0.74
TMEM39A-203ENST00000461654 ITPK1Q13572 414 aa19.67■□□□□ 0.74
TMEM39A-203ENST00000461654 AKAP4Q5JQC9 854 aa19.67■□□□□ 0.74
TMEM39A-203ENST00000461654 AK7Q96M32 723 aa19.67■□□□□ 0.74
TMEM39A-203ENST00000461654 C4BP0C0L5 1744 aa19.67■□□□□ 0.74
TMEM39A-203ENST00000461654 LINC00116Q8NCU8 138 aa19.66■□□□□ 0.74
TMEM39A-203ENST00000461654 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
TMEM39A-203ENST00000461654 IFT57Q9NWB7 429 aa19.66■□□□□ 0.74
TMEM39A-203ENST00000461654 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
TMEM39A-203ENST00000461654 MSH5O43196 834 aa19.65■□□□□ 0.74
TMEM39A-203ENST00000461654 NFATC2IPQ8NCF5 419 aa19.65■□□□□ 0.74
TMEM39A-203ENST00000461654 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
TMEM39A-203ENST00000461654 NEFLP07196 543 aa19.64■□□□□ 0.73
TMEM39A-203ENST00000461654 SSFA2P28290 1259 aa19.64■□□□□ 0.73
TMEM39A-203ENST00000461654 DCTN1Q14203 1278 aa19.64■□□□□ 0.73
TMEM39A-203ENST00000461654 MCM10Q7L590 875 aa19.64■□□□□ 0.73
TMEM39A-203ENST00000461654 SLC4A9Q96Q91 983 aa19.64■□□□□ 0.73
TMEM39A-203ENST00000461654 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
TMEM39A-203ENST00000461654 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
TMEM39A-203ENST00000461654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
TMEM39A-203ENST00000461654 AMIGO3Q86WK7 504 aa19.63■□□□□ 0.73
TMEM39A-203ENST00000461654 CFAP44Q96MT7 982 aa19.63■□□□□ 0.73
TMEM39A-203ENST00000461654 FANCIQ9NVI1 1328 aa19.62■□□□□ 0.73
TMEM39A-203ENST00000461654 RC3H1Q5TC82 1133 aaKnown RBP19.62■□□□□ 0.73
TMEM39A-203ENST00000461654 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
TMEM39A-203ENST00000461654 DLG5Q8TDM6 1919 aa19.62■□□□□ 0.73
TMEM39A-203ENST00000461654 TSR2Q969E8 191 aaKnown RBP19.6■□□□□ 0.73
TMEM39A-203ENST00000461654 RBM42Q9BTD8 480 aaKnown RBP19.6■□□□□ 0.73
TMEM39A-203ENST00000461654 SLC52A2Q9HAB3 445 aa19.6■□□□□ 0.73
TMEM39A-203ENST00000461654 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
TMEM39A-203ENST00000461654 GNPATO15228 680 aa19.59■□□□□ 0.73
TMEM39A-203ENST00000461654 RNMTO43148 476 aaKnown RBP19.59■□□□□ 0.73
TMEM39A-203ENST00000461654 CT47B1P0C2W7 299 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms