RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 ARXQ96QS3 562 aa31.9■■■□□ 2.7
LMBR1-214ENST00000461469 SYT17Q9BSW7 474 aa31.89■■■□□ 2.7
LMBR1-214ENST00000461469 C1orf141Q5JVX7 400 aa31.88■■■□□ 2.69
LMBR1-214ENST00000461469 MSH5O43196 834 aa31.86■■■□□ 2.69
LMBR1-214ENST00000461469 COL5A3P25940 1745 aaPredicted RBP31.86■■■□□ 2.69
LMBR1-214ENST00000461469 ZNF831Q5JPB2 1677 aa31.86■■■□□ 2.69
LMBR1-214ENST00000461469 ATP6V1AP38606 617 aa31.85■■■□□ 2.69
LMBR1-214ENST00000461469 CABP4P57796 275 aa31.85■■■□□ 2.69
LMBR1-214ENST00000461469 MSL1Q68DK7 614 aa31.85■■■□□ 2.69
LMBR1-214ENST00000461469 ADAMTS7Q9UKP4 1686 aa31.84■■■□□ 2.69
LMBR1-214ENST00000461469 MTHFSDQ2M296 383 aaKnown RBP31.84■■■□□ 2.69
LMBR1-214ENST00000461469 AK7Q96M32 723 aa31.84■■■□□ 2.69
LMBR1-214ENST00000461469 LGR6Q9HBX8 967 aa31.84■■■□□ 2.69
LMBR1-214ENST00000461469 NFATC2IPQ8NCF5 419 aa31.83■■■□□ 2.69
LMBR1-214ENST00000461469 AKAP4Q5JQC9 854 aa31.82■■■□□ 2.68
LMBR1-214ENST00000461469 PHF14O94880 888 aa31.81■■■□□ 2.68
LMBR1-214ENST00000461469 PPP2R1AP30153 589 aa31.81■■■□□ 2.68
LMBR1-214ENST00000461469 MAP3K5Q99683 1374 aa31.81■■■□□ 2.68
LMBR1-214ENST00000461469 U2SURPO15042 1029 aaKnown RBP31.8■■■□□ 2.68
LMBR1-214ENST00000461469 RBM42Q9BTD8 480 aaKnown RBP31.8■■■□□ 2.68
LMBR1-214ENST00000461469 MYH14Q7Z406 1995 aaKnown RBP31.79■■■□□ 2.68
LMBR1-214ENST00000461469 MRC1P22897 1456 aa31.79■■■□□ 2.68
LMBR1-214ENST00000461469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.79■■■□□ 2.68
LMBR1-214ENST00000461469 TJP1Q07157 1748 aa31.78■■■□□ 2.68
LMBR1-214ENST00000461469 POLD1P28340 1107 aa31.78■■■□□ 2.68
LMBR1-214ENST00000461469 RNMTO43148 476 aaKnown RBP31.77■■■□□ 2.68
LMBR1-214ENST00000461469 GNPATO15228 680 aa31.76■■■□□ 2.67
LMBR1-214ENST00000461469 FLAD1Q8NFF5 587 aa31.76■■■□□ 2.67
LMBR1-214ENST00000461469 PTCD1O75127 700 aaKnown RBP31.74■■■□□ 2.67
LMBR1-214ENST00000461469 KLHL34Q8N239 644 aa31.74■■■□□ 2.67
LMBR1-214ENST00000461469 SLC52A2Q9HAB3 445 aa31.74■■■□□ 2.67
LMBR1-214ENST00000461469 CICQ96RK0 1608 aaPredicted RBP31.74■■■□□ 2.67
LMBR1-214ENST00000461469 HMGB2P26583 209 aaKnown RBP31.73■■■□□ 2.67
LMBR1-214ENST00000461469 SSFA2P28290 1259 aa31.73■■■□□ 2.67
LMBR1-214ENST00000461469 NLGN2Q8NFZ4 835 aa31.72■■■□□ 2.67
LMBR1-214ENST00000461469 PHACTR3Q96KR7 559 aa31.7■■■□□ 2.67
LMBR1-214ENST00000461469 RSPH6AQ9H0K4 717 aa31.7■■■□□ 2.67
LMBR1-214ENST00000461469 SLC39A6Q13433 755 aa31.69■■■□□ 2.66
LMBR1-214ENST00000461469 CFAP53Q96M91 514 aa31.69■■■□□ 2.66
LMBR1-214ENST00000461469 C4AP0C0L4 1744 aa31.69■■■□□ 2.66
LMBR1-214ENST00000461469 KCPQ6ZWJ8 1503 aa31.68■■■□□ 2.66
LMBR1-214ENST00000461469 CNTNAP4Q9C0A0 1308 aa31.68■■■□□ 2.66
LMBR1-214ENST00000461469 SIPA1L3O60292 1781 aaPredicted RBP31.68■■■□□ 2.66
LMBR1-214ENST00000461469 PRKAR2BP31323 418 aa31.67■■■□□ 2.66
LMBR1-214ENST00000461469 UBR2Q8IWV8 1755 aa31.66■■■□□ 2.66
LMBR1-214ENST00000461469 RC3H1Q5TC82 1133 aaKnown RBP31.65■■■□□ 2.66
LMBR1-214ENST00000461469 IL17REQ8NFR9 667 aa31.65■■■□□ 2.66
LMBR1-214ENST00000461469 UTRNP46939 3433 aa31.64■■■□□ 2.66
LMBR1-214ENST00000461469 RTCBQ9Y3I0 505 aaKnown RBP31.63■■■□□ 2.65
LMBR1-214ENST00000461469 DCAF8L1A6NGE4 600 aa31.62■■■□□ 2.65
LMBR1-214ENST00000461469 CRKLP46109 303 aaKnown RBP31.62■■■□□ 2.65
LMBR1-214ENST00000461469 RPS6KA4O75676 772 aa31.61■■■□□ 2.65
LMBR1-214ENST00000461469 U2AF1L5P0DN76 240 aaPredicted RBP31.61■■■□□ 2.65
LMBR1-214ENST00000461469 U2AF1Q01081 240 aaKnown RBP eCLIP31.61■■■□□ 2.65
LMBR1-214ENST00000461469 DNAJC10Q8IXB1 793 aa31.61■■■□□ 2.65
LMBR1-214ENST00000461469 GAS2L2Q8NHY3 880 aa31.61■■■□□ 2.65
LMBR1-214ENST00000461469 ARHGEF1Q92888 912 aaKnown RBP31.61■■■□□ 2.65
LMBR1-214ENST00000461469 YY1P25490 414 aa31.6■■■□□ 2.65
LMBR1-214ENST00000461469 GNAT3A8MTJ3 354 aa31.59■■■□□ 2.65
LMBR1-214ENST00000461469 TRAPPC3LQ5T215 181 aa31.59■■■□□ 2.65
LMBR1-214ENST00000461469 INTS5Q6P9B9 1019 aaKnown RBP31.59■■■□□ 2.65
LMBR1-214ENST00000461469 NUDCQ9Y266 331 aa31.59■■■□□ 2.65
LMBR1-214ENST00000461469 CHD4Q14839 1912 aa31.56■■■□□ 2.64
LMBR1-214ENST00000461469 CEMIPQ8WUJ3 1361 aa31.56■■■□□ 2.64
LMBR1-214ENST00000461469 DDX10Q13206 875 aaKnown RBP31.55■■■□□ 2.64
LMBR1-214ENST00000461469 GOLGB1Q14789 3259 aaKnown RBP31.54■■■□□ 2.64
LMBR1-214ENST00000461469 ADRA2BP18089 450 aa31.54■■■□□ 2.64
LMBR1-214ENST00000461469 FCHSD2O94868 740 aa31.53■■■□□ 2.64
LMBR1-214ENST00000461469 GYS1P13807 737 aa31.53■■■□□ 2.64
LMBR1-214ENST00000461469 GPR162Q16538 588 aa31.53■■■□□ 2.64
LMBR1-214ENST00000461469 MMP10P09238 476 aa31.52■■■□□ 2.64
LMBR1-214ENST00000461469 CYP19A1P11511 503 aaPredicted RBP31.52■■■□□ 2.64
LMBR1-214ENST00000461469 YBX3P16989 372 aaKnown RBP eCLIP31.52■■■□□ 2.645e-7■■□□□ 12.5
LMBR1-214ENST00000461469 SRP68Q9UHB9 627 aaKnown RBP31.52■■■□□ 2.64
LMBR1-214ENST00000461469 CD2APQ9Y5K6 639 aa31.52■■■□□ 2.64
LMBR1-214ENST00000461469 PELP1Q8IZL8 1130 aaKnown RBP31.51■■■□□ 2.63
LMBR1-214ENST00000461469 KIAA1551Q9HCM1 1747 aa31.5■■■□□ 2.63
LMBR1-214ENST00000461469 KIF13BQ9NQT8 1826 aa31.5■■■□□ 2.63
LMBR1-214ENST00000461469 DLG5Q8TDM6 1919 aa31.5■■■□□ 2.63
LMBR1-214ENST00000461469 RFC4P35249 363 aa31.5■■■□□ 2.63
LMBR1-214ENST00000461469 CCDC87Q9NVE4 849 aa31.5■■■□□ 2.63
LMBR1-214ENST00000461469 TEFQ10587 303 aa31.49■■■□□ 2.63
LMBR1-214ENST00000461469 KCNQ3O43525 872 aa31.48■■■□□ 2.63
LMBR1-214ENST00000461469 ZNF496Q96IT1 587 aaPredicted RBP31.48■■■□□ 2.63
LMBR1-214ENST00000461469 ZNF790Q6PG37 636 aa31.47■■■□□ 2.63
LMBR1-214ENST00000461469 MCM10Q7L590 875 aa31.47■■■□□ 2.63
LMBR1-214ENST00000461469 ZBTB1Q9Y2K1 713 aa31.47■■■□□ 2.63
LMBR1-214ENST00000461469 SOS1Q07889 1333 aaPredicted RBP31.47■■■□□ 2.63
LMBR1-214ENST00000461469 USP42Q9H9J4 1324 aaKnown RBP31.47■■■□□ 2.63
LMBR1-214ENST00000461469 DCTN1Q14203 1278 aa31.46■■■□□ 2.63
LMBR1-214ENST00000461469 VSIG10Q8N0Z9 540 aa31.46■■■□□ 2.63
LMBR1-214ENST00000461469 NLGN1Q8N2Q7 840 aa31.45■■■□□ 2.63
LMBR1-214ENST00000461469 FKBP8Q14318 412 aa31.44■■■□□ 2.62
LMBR1-214ENST00000461469 TTC5Q8N0Z6 440 aa31.44■■■□□ 2.62
LMBR1-214ENST00000461469 PLEKHF1Q96S99 279 aa31.44■■■□□ 2.62
LMBR1-214ENST00000461469 HEG1Q9ULI3 1381 aa31.43■■■□□ 2.62
LMBR1-214ENST00000461469 N4BP2Q86UW6 1770 aaPredicted RBP31.43■■■□□ 2.62
LMBR1-214ENST00000461469 WWC3Q9ULE0 1092 aa31.43■■■□□ 2.62
LMBR1-214ENST00000461469 C10orf71Q711Q0 1435 aa31.41■■■□□ 2.62
LMBR1-214ENST00000461469 RALBP1Q15311 655 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms