RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 PANK3Q9H999 370 aa11.44□□□□□ -0.58
PDGFRA-202ENST00000461294 NSD3Q9BZ95 1437 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 A0A1W2PP64 1363 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 PHF14O94880 888 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 MMP10P09238 476 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 SSFA2P28290 1259 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 EDC4Q6P2E9 1401 aaKnown RBP11.43□□□□□ -0.58
PDGFRA-202ENST00000461294 CNTNAP1P78357 1384 aa11.42□□□□□ -0.58
PDGFRA-202ENST00000461294 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
PDGFRA-202ENST00000461294 KCNA3P22001 575 aa11.42□□□□□ -0.58
PDGFRA-202ENST00000461294 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
PDGFRA-202ENST00000461294 KNSTRNQ9Y448 316 aa11.42□□□□□ -0.58
PDGFRA-202ENST00000461294 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
PDGFRA-202ENST00000461294 CD163L1Q9NR16 1453 aa11.41□□□□□ -0.58
PDGFRA-202ENST00000461294 HSPA8P11142 646 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-202ENST00000461294 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-202ENST00000461294 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
PDGFRA-202ENST00000461294 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-202ENST00000461294 CARD14Q9BXL6 1004 aa11.4□□□□□ -0.58
PDGFRA-202ENST00000461294 VEGFBP49765 207 aa11.39□□□□□ -0.59
PDGFRA-202ENST00000461294 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
PDGFRA-202ENST00000461294 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
PDGFRA-202ENST00000461294 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
PDGFRA-202ENST00000461294 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
PDGFRA-202ENST00000461294 LTN1O94822 1766 aa11.39□□□□□ -0.59
PDGFRA-202ENST00000461294 POTECB2RU33 542 aa11.38□□□□□ -0.59
PDGFRA-202ENST00000461294 PER1O15534 1290 aaPredicted RBP11.38□□□□□ -0.59
PDGFRA-202ENST00000461294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.38□□□□□ -0.59
PDGFRA-202ENST00000461294 NLGN1Q8N2Q7 840 aa11.38□□□□□ -0.59
PDGFRA-202ENST00000461294 NPC1L1Q9UHC9 1359 aa11.38□□□□□ -0.59
PDGFRA-202ENST00000461294 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
PDGFRA-202ENST00000461294 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
PDGFRA-202ENST00000461294 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
PDGFRA-202ENST00000461294 FYB1O15117 783 aa11.36□□□□□ -0.59
PDGFRA-202ENST00000461294 COG3Q96JB2 828 aa11.36□□□□□ -0.59
PDGFRA-202ENST00000461294 CCDC88AQ3V6T2 1871 aa11.36□□□□□ -0.59
PDGFRA-202ENST00000461294 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-202ENST00000461294 LMNB1P20700 586 aa11.35□□□□□ -0.59
PDGFRA-202ENST00000461294 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-202ENST00000461294 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-202ENST00000461294 NME9Q86XW9 330 aa11.35□□□□□ -0.59
PDGFRA-202ENST00000461294 FAM208AQ9UK61 1670 aaKnown RBP11.34□□□□□ -0.59
PDGFRA-202ENST00000461294 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
PDGFRA-202ENST00000461294 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
PDGFRA-202ENST00000461294 GNPATO15228 680 aa11.33□□□□□ -0.6
PDGFRA-202ENST00000461294 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
PDGFRA-202ENST00000461294 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
PDGFRA-202ENST00000461294 IP6K1Q92551 441 aa11.33□□□□□ -0.6
PDGFRA-202ENST00000461294 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
PDGFRA-202ENST00000461294 PASKQ96RG2 1323 aa11.33□□□□□ -0.6
PDGFRA-202ENST00000461294 C4AP0C0L4 1744 aa11.32□□□□□ -0.6
PDGFRA-202ENST00000461294 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
PDGFRA-202ENST00000461294 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
PDGFRA-202ENST00000461294 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
PDGFRA-202ENST00000461294 GGNBP2Q9H3C7 697 aa11.32□□□□□ -0.6
PDGFRA-202ENST00000461294 MAP2P11137 1827 aaKnown RBP11.31□□□□□ -0.6
PDGFRA-202ENST00000461294 ITGB4P16144 1822 aa11.31□□□□□ -0.6
PDGFRA-202ENST00000461294 RASSF7Q02833 373 aa11.31□□□□□ -0.6
PDGFRA-202ENST00000461294 TRAPPC3LQ5T215 181 aa11.31□□□□□ -0.6
PDGFRA-202ENST00000461294 LTV1Q96GA3 475 aaPredicted RBP11.31□□□□□ -0.6
PDGFRA-202ENST00000461294 LOC102724428A0A0B4J2F2 783 aa11.3□□□□□ -0.6
PDGFRA-202ENST00000461294 SIK1P57059 783 aa11.3□□□□□ -0.6
PDGFRA-202ENST00000461294 RALBP1Q15311 655 aa11.3□□□□□ -0.6
PDGFRA-202ENST00000461294 DEFB115Q30KQ5 88 aa11.3□□□□□ -0.6
PDGFRA-202ENST00000461294 CC2D1BQ5T0F9 858 aaKnown RBP11.3□□□□□ -0.6
PDGFRA-202ENST00000461294 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
PDGFRA-202ENST00000461294 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
PDGFRA-202ENST00000461294 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
PDGFRA-202ENST00000461294 MEGF6O75095 1541 aa11.29□□□□□ -0.6
PDGFRA-202ENST00000461294 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
PDGFRA-202ENST00000461294 RGPD2P0DJD1 1756 aa11.28□□□□□ -0.6
PDGFRA-202ENST00000461294 GYS1P13807 737 aa11.28□□□□□ -0.6
PDGFRA-202ENST00000461294 CHRNA5P30532 468 aa11.28□□□□□ -0.6
PDGFRA-202ENST00000461294 BEGAINQ9BUH8 593 aa11.28□□□□□ -0.6
PDGFRA-202ENST00000461294 MCOLN1Q9GZU1 580 aa11.28□□□□□ -0.6
PDGFRA-202ENST00000461294 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
PDGFRA-202ENST00000461294 WDR33Q9C0J8 1336 aaKnown RBP11.28□□□□□ -0.6
PDGFRA-202ENST00000461294 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
PDGFRA-202ENST00000461294 ANP32CO43423 234 aa11.27□□□□□ -0.61
PDGFRA-202ENST00000461294 ITGBL1O95965 494 aaPredicted RBP11.27□□□□□ -0.61
PDGFRA-202ENST00000461294 ITPK1Q13572 414 aa11.27□□□□□ -0.61
PDGFRA-202ENST00000461294 PIGBQ92521 554 aa11.27□□□□□ -0.61
PDGFRA-202ENST00000461294 RTCBQ9Y3I0 505 aaKnown RBP11.27□□□□□ -0.61
PDGFRA-202ENST00000461294 KIF24Q5T7B8 1368 aa11.27□□□□□ -0.61
PDGFRA-202ENST00000461294 ADRA2BP18089 450 aa11.26□□□□□ -0.61
PDGFRA-202ENST00000461294 ATP6V1AP38606 617 aa11.26□□□□□ -0.61
PDGFRA-202ENST00000461294 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
PDGFRA-202ENST00000461294 DICER1Q9UPY3 1922 aaKnown RBP11.26□□□□□ -0.61
PDGFRA-202ENST00000461294 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
PDGFRA-202ENST00000461294 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
PDGFRA-202ENST00000461294 RFC4P35249 363 aa11.25□□□□□ -0.61
PDGFRA-202ENST00000461294 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
PDGFRA-202ENST00000461294 LDHDQ86WU2 507 aa11.25□□□□□ -0.61
PDGFRA-202ENST00000461294 RAPGEF4Q8WZA2 1011 aa11.25□□□□□ -0.61
PDGFRA-202ENST00000461294 PRKRIP1Q9H875 184 aaPredicted RBP11.25□□□□□ -0.61
PDGFRA-202ENST00000461294 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms