RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 CTNNA2P26232 953 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 ESCO1Q5FWF5 840 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 CCDC183Q5T5S1 534 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 CWC27Q6UX04 472 aaKnown RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 FERMT1Q9BQL6 677 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 DDX23Q9BUQ8 820 aaKnown RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 SCAND2PQ9GZW5 306 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 U3KPZ7 1027 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 POLR3GO15318 223 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 FSD2A1L4K1 749 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 WDHD1O75717 1129 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 CETN1Q12798 172 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 ATF7IPQ6VMQ6 1270 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 SRGAP3O43295 1099 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 RPAP2Q8IXW5 612 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 SMARCC1Q92922 1105 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 FERMT2Q96AC1 680 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 HOMER2Q9NSB8 354 aa10.44□□□□□ -0.74
BRCA1-205ENST00000461221 BCCIPQ9P287 314 aaKnown RBP eCLIP10.44□□□□□ -0.74
BRCA1-205ENST00000461221 SPECC1Q5M775 1068 aa10.43□□□□□ -0.74
BRCA1-205ENST00000461221 ZNF692Q9BU19 519 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-205ENST00000461221 STRN4Q9NRL3 753 aa10.43□□□□□ -0.74
BRCA1-205ENST00000461221 PPP1R1BQ9UD71 204 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-205ENST00000461221 GOLGA6L9A6NEM1 432 aa10.43□□□□□ -0.74
BRCA1-205ENST00000461221 CUL5Q93034 780 aa10.43□□□□□ -0.74
BRCA1-205ENST00000461221 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
BRCA1-205ENST00000461221 AKAP2Q9Y2D5 859 aa10.43□□□□□ -0.74
BRCA1-205ENST00000461221 CASTP20810 708 aaKnown RBP10.43□□□□□ -0.74
BRCA1-205ENST00000461221 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-205ENST00000461221 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
BRCA1-205ENST00000461221 SH2B1Q9NRF2 756 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-205ENST00000461221 GSDMDP57764 484 aa10.42□□□□□ -0.74
BRCA1-205ENST00000461221 NUP88Q99567 741 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-205ENST00000461221 SYCE3A1L190 88 aa10.42□□□□□ -0.74
BRCA1-205ENST00000461221 SREK1Q8WXA9 508 aaKnown RBP10.42□□□□□ -0.74
BRCA1-205ENST00000461221 HMGB1P09429 215 aaKnown RBP10.42□□□□□ -0.74
BRCA1-205ENST00000461221 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
BRCA1-205ENST00000461221 UBA5Q9GZZ9 404 aa10.42□□□□□ -0.74
BRCA1-205ENST00000461221 PODXL2Q9NZ53 605 aa10.42□□□□□ -0.74
BRCA1-205ENST00000461221 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
BRCA1-205ENST00000461221 MYL6BP14649 208 aa10.42□□□□□ -0.74
BRCA1-205ENST00000461221 TOM1L2Q6ZVM7 507 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 FAM114A1Q8IWE2 563 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 PYM1Q9BRP8 204 aaKnown RBP10.41□□□□□ -0.74
BRCA1-205ENST00000461221 CLIP2Q9UDT6 1046 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 RAB11FIP3O75154 756 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 CAMK4Q16566 473 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 SULT6B1Q6IMI4 303 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 CTR9Q6PD62 1173 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 CTCFLQ8NI51 663 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-205ENST00000461221 PIBF1Q8WXW3 757 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 MACROD2A1Z1Q3 448 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 STXBP4Q6ZWJ1 553 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 CEP112Q8N8E3 955 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 TSR2Q969E8 191 aaKnown RBP10.41□□□□□ -0.74
BRCA1-205ENST00000461221 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.41□□□□□ -0.74
BRCA1-205ENST00000461221 POLR3DP05423 398 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-205ENST00000461221 HLTFQ14527 1009 aaKnown RBP eCLIP10.41□□□□□ -0.743e-6■■□□□ 13.4
BRCA1-205ENST00000461221 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
BRCA1-205ENST00000461221 CRACR2BQ8N4Y2 399 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-205ENST00000461221 SSX2IPQ9Y2D8 614 aa10.4□□□□□ -0.74
BRCA1-205ENST00000461221 TTC21AQ8NDW8 1320 aa10.4□□□□□ -0.74
BRCA1-205ENST00000461221 BAG4O95429 457 aaKnown RBP10.4□□□□□ -0.74
BRCA1-205ENST00000461221 IBSPP21815 317 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-205ENST00000461221 AMPD3Q01432 767 aa10.4□□□□□ -0.74
BRCA1-205ENST00000461221 IFI16Q16666 785 aaKnown RBP10.4□□□□□ -0.74
BRCA1-205ENST00000461221 IL27Q8NEV9 243 aa10.4□□□□□ -0.74
BRCA1-205ENST00000461221 LRRC45Q96CN5 670 aa10.4□□□□□ -0.74
BRCA1-205ENST00000461221 PROSER2Q86WR7 435 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-205ENST00000461221 MKNK2Q9HBH9 465 aa10.4□□□□□ -0.74
BRCA1-205ENST00000461221 C8orf76Q96K31 380 aa10.4□□□□□ -0.74
BRCA1-205ENST00000461221 ANKRD30BQ9BXX2 1392 aa10.4□□□□□ -0.75
BRCA1-205ENST00000461221 BMS1Q14692 1282 aaKnown RBP10.4□□□□□ -0.75
BRCA1-205ENST00000461221 EHBP1Q8NDI1 1231 aa10.4□□□□□ -0.75
BRCA1-205ENST00000461221 A0A087WZG4 1122 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 BCAR3O75815 825 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 GLRX3O76003 335 aaKnown RBP10.39□□□□□ -0.75
BRCA1-205ENST00000461221 CAVIN4Q5BKX8 364 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 TMEM132EQ6IEE7 984 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.39□□□□□ -0.75
BRCA1-205ENST00000461221 V9GYY5 206 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-205ENST00000461221 ACTN2P35609 894 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 KIF1BPQ96EK5 621 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 IKBKGQ9Y6K9 419 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 CADPSQ9ULU8 1353 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 BTBD11A6QL63 1104 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 TNNT1P13805 278 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 MAATS1Q7Z4T9 603 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
BRCA1-205ENST00000461221 TOP2AP11388 1531 aaKnown RBP10.39□□□□□ -0.75
BRCA1-205ENST00000461221 ANKRD50Q9ULJ7 1429 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 TMCO5BA8MYB1 307 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 IFIT1P09914 478 aaKnown RBP10.39□□□□□ -0.75
BRCA1-205ENST00000461221 MTIF2P46199 727 aaKnown RBP10.39□□□□□ -0.75
BRCA1-205ENST00000461221 CBX1P83916 185 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 METTL24Q5JXM2 366 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 PPP1R14CQ8TAE6 165 aa10.39□□□□□ -0.75
BRCA1-205ENST00000461221 NSRP1Q9H0G5 558 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms