RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 ERVV-2B6SEH9 535 aa17.27■□□□□ 0.36
SHISA5-211ENST00000460758 SIK1P57059 783 aa17.27■□□□□ 0.36
SHISA5-211ENST00000460758 C1orf141Q5JVX7 400 aa17.27■□□□□ 0.36
SHISA5-211ENST00000460758 COL23A1Q86Y22 540 aaPredicted RBP17.27■□□□□ 0.36
SHISA5-211ENST00000460758 SLC16A10Q8TF71 515 aa17.27■□□□□ 0.36
SHISA5-211ENST00000460758 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
SHISA5-211ENST00000460758 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
SHISA5-211ENST00000460758 ITPK1Q13572 414 aa17.26■□□□□ 0.35
SHISA5-211ENST00000460758 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
SHISA5-211ENST00000460758 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
SHISA5-211ENST00000460758 C4AP0C0L4 1744 aa17.26■□□□□ 0.35
SHISA5-211ENST00000460758 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
SHISA5-211ENST00000460758 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
SHISA5-211ENST00000460758 ARXQ96QS3 562 aa17.24■□□□□ 0.35
SHISA5-211ENST00000460758 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
SHISA5-211ENST00000460758 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
SHISA5-211ENST00000460758 CABP4P57796 275 aa17.23■□□□□ 0.35
SHISA5-211ENST00000460758 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
SHISA5-211ENST00000460758 AK7Q96M32 723 aa17.23■□□□□ 0.35
SHISA5-211ENST00000460758 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
SHISA5-211ENST00000460758 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
SHISA5-211ENST00000460758 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
SHISA5-211ENST00000460758 SMIM5Q71RC9 77 aa17.22■□□□□ 0.35
SHISA5-211ENST00000460758 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
SHISA5-211ENST00000460758 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.35
SHISA5-211ENST00000460758 MSH5O43196 834 aa17.21■□□□□ 0.35
SHISA5-211ENST00000460758 PHF14O94880 888 aa17.2■□□□□ 0.34
SHISA5-211ENST00000460758 POLD1P28340 1107 aa17.2■□□□□ 0.34
SHISA5-211ENST00000460758 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
SHISA5-211ENST00000460758 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
SHISA5-211ENST00000460758 LGR6Q9HBX8 967 aa17.2■□□□□ 0.34
SHISA5-211ENST00000460758 KCPQ6ZWJ8 1503 aa17.2■□□□□ 0.34
SHISA5-211ENST00000460758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.19■□□□□ 0.34
SHISA5-211ENST00000460758 FLAD1Q8NFF5 587 aa17.19■□□□□ 0.34
SHISA5-211ENST00000460758 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
SHISA5-211ENST00000460758 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
SHISA5-211ENST00000460758 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
SHISA5-211ENST00000460758 CHD4Q14839 1912 aa17.18■□□□□ 0.34
SHISA5-211ENST00000460758 GNPATO15228 680 aa17.18■□□□□ 0.34
SHISA5-211ENST00000460758 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
SHISA5-211ENST00000460758 SSFA2P28290 1259 aa17.18■□□□□ 0.34
SHISA5-211ENST00000460758 SLC52A2Q9HAB3 445 aa17.18■□□□□ 0.34
SHISA5-211ENST00000460758 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
SHISA5-211ENST00000460758 RALBP1Q15311 655 aa17.16■□□□□ 0.34
SHISA5-211ENST00000460758 RSPH6AQ9H0K4 717 aa17.16■□□□□ 0.34
SHISA5-211ENST00000460758 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
SHISA5-211ENST00000460758 CNTNAP4Q9C0A0 1308 aa17.16■□□□□ 0.34
SHISA5-211ENST00000460758 KIF13BQ9NQT8 1826 aa17.15■□□□□ 0.34
SHISA5-211ENST00000460758 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
SHISA5-211ENST00000460758 PRKAR2BP31323 418 aa17.14■□□□□ 0.33
SHISA5-211ENST00000460758 DIEXFQ68CQ4 756 aaKnown RBP17.14■□□□□ 0.33
SHISA5-211ENST00000460758 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
SHISA5-211ENST00000460758 ANP32CO43423 234 aa17.13■□□□□ 0.33
SHISA5-211ENST00000460758 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
SHISA5-211ENST00000460758 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
SHISA5-211ENST00000460758 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
SHISA5-211ENST00000460758 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
SHISA5-211ENST00000460758 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
SHISA5-211ENST00000460758 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
SHISA5-211ENST00000460758 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
SHISA5-211ENST00000460758 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
SHISA5-211ENST00000460758 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
SHISA5-211ENST00000460758 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHISA5-211ENST00000460758 RTCBQ9Y3I0 505 aaKnown RBP17.11■□□□□ 0.33
SHISA5-211ENST00000460758 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
SHISA5-211ENST00000460758 CEMIPQ8WUJ3 1361 aa17.11■□□□□ 0.33
SHISA5-211ENST00000460758 CRKLP46109 303 aaKnown RBP17.1■□□□□ 0.33
SHISA5-211ENST00000460758 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
SHISA5-211ENST00000460758 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
SHISA5-211ENST00000460758 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
SHISA5-211ENST00000460758 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.33
SHISA5-211ENST00000460758 ADRA2BP18089 450 aa17.08■□□□□ 0.32
SHISA5-211ENST00000460758 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
SHISA5-211ENST00000460758 ARHGEF1Q92888 912 aaKnown RBP17.08■□□□□ 0.32
SHISA5-211ENST00000460758 FCHSD2O94868 740 aa17.07■□□□□ 0.32
SHISA5-211ENST00000460758 INTS5Q6P9B9 1019 aaKnown RBP17.07■□□□□ 0.32
SHISA5-211ENST00000460758 BRCA1P38398 1863 aaKnown RBP17.07■□□□□ 0.32
SHISA5-211ENST00000460758 TEFQ10587 303 aa17.06■□□□□ 0.32
SHISA5-211ENST00000460758 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
SHISA5-211ENST00000460758 SCN7AQ01118 1682 aa17.06■□□□□ 0.32
SHISA5-211ENST00000460758 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
SHISA5-211ENST00000460758 CYP19A1P11511 503 aaPredicted RBP17.05■□□□□ 0.32
SHISA5-211ENST00000460758 YY1P25490 414 aa17.05■□□□□ 0.32
SHISA5-211ENST00000460758 CCDC87Q9NVE4 849 aa17.05■□□□□ 0.32
SHISA5-211ENST00000460758 CD2APQ9Y5K6 639 aa17.05■□□□□ 0.32
SHISA5-211ENST00000460758 GOLGB1Q14789 3259 aaKnown RBP17.05■□□□□ 0.32
SHISA5-211ENST00000460758 UTRNP46939 3433 aa17.05■□□□□ 0.32
SHISA5-211ENST00000460758 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
SHISA5-211ENST00000460758 MMP10P09238 476 aa17.04■□□□□ 0.32
SHISA5-211ENST00000460758 GYS1P13807 737 aa17.04■□□□□ 0.32
SHISA5-211ENST00000460758 RFC4P35249 363 aa17.04■□□□□ 0.32
SHISA5-211ENST00000460758 C10orf71Q711Q0 1435 aa17.04■□□□□ 0.32
SHISA5-211ENST00000460758 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
SHISA5-211ENST00000460758 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
SHISA5-211ENST00000460758 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
SHISA5-211ENST00000460758 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
SHISA5-211ENST00000460758 GPR162Q16538 588 aa17.03■□□□□ 0.32
SHISA5-211ENST00000460758 ZNF790Q6PG37 636 aa17.03■□□□□ 0.32
SHISA5-211ENST00000460758 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
SHISA5-211ENST00000460758 VSIG10Q8N0Z9 540 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms