RNA–Protein interactions for RNA: ENST00000460500.1

SSX2IP-205, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 2,116 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-205ENST00000460500 PHLDB3Q6NSJ2 640 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 PAF1Q8N7H5 531 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 BANK1Q8NDB2 785 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 VPS37AQ8NEZ2 397 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 TSC1Q92574 1164 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 SOWAHDA6NJG2 315 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 DNAJC6O75061 913 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 LONRF1Q17RB8 773 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 LARP1BQ659C4 914 aaKnown RBP6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 KRT77Q7Z794 578 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 BORCS6Q96GS4 357 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 CEP89Q96ST8 783 aa6.56□□□□□ -1.36
SSX2IP-205ENST00000460500 SCAMP3O14828 347 aaKnown RBP6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 FOSP01100 380 aaPredicted RBP6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 ATICP31939 592 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 SATB1Q01826 763 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 VARS2Q5ST30 1063 aaKnown RBP6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 PPARGC1BQ86YN6 1023 aaKnown RBP6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 PPM1EQ8WY54 764 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 ARPC5LQ9BPX5 153 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 ATP1B4Q9UN42 357 aaPredicted RBP6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 LZTS1Q9Y250 596 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 RIMBP2O15034 1052 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 GNALP38405 381 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 RBL2Q08999 1139 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 NFE2L2Q16236 605 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 ALDH1L2Q3SY69 923 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 SLC43A3Q8NBI5 491 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 MTMR14Q8NCE2 650 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 ALDH8A1Q9H2A2 487 aaPredicted RBP6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 CABP2Q9NPB3 220 aa6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 RBM28Q9NW13 759 aaKnown RBP6.55□□□□□ -1.36
SSX2IP-205ENST00000460500 DYTNA2CJ06 578 aa6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 TNNT2P45379 298 aaPredicted RBP6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 AMPD3Q01432 767 aa6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 ZNF687Q8N1G0 1237 aa6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 RNF217Q8TC41 542 aa6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 CCDC47Q96A33 483 aaKnown RBP6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 PAIP2Q9BPZ3 127 aaKnown RBP6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.54□□□□□ -1.36
SSX2IP-205ENST00000460500 RRM1P23921 792 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 VPS72Q15906 364 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 ANKRD13BQ86YJ7 626 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 OGFOD1Q8N543 542 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 NGEFQ8N5V2 710 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 ITFG2Q969R8 447 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 OSBPL2Q9H1P3 480 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 RANBP17Q9H2T7 1088 aaKnown RBP6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 NLRP2Q9NX02 1062 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 VGLL3A8MV65 326 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 MTA2O94776 668 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 NAT1P18440 290 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 SIM2Q14190 667 aaPredicted RBP6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 SYCP2LQ5T4T6 812 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 KANK3Q6NY19 840 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 TSR2Q969E8 191 aaKnown RBP6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 APBA2Q99767 749 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 IER2Q9BTL4 223 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 REPIN1Q9BWE0 567 aaKnown RBP6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 AS3MTQ9HBK9 375 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 ODF2LQ9ULJ1 636 aa6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 THRAP3Q9Y2W1 955 aaKnown RBP6.53□□□□□ -1.36
SSX2IP-205ENST00000460500 PALM3A6NDB9 673 aaPredicted RBP6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 C11orf95C9JLR9 678 aaPredicted RBP6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 PTGER2P43116 358 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 CLK1P49759 484 aaKnown RBP6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 CCDC93Q567U6 631 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 PPP1R18Q6NYC8 613 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 SKAP1Q86WV1 359 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 CHPFQ8IZ52 775 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 PRPF38AQ8NAV1 312 aaKnown RBP6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 CFAP53Q96M91 514 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 FAM13BQ9NYF5 915 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 NPHP1O15259 732 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 PLIN1O60240 522 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 RNASEH2AO75792 299 aaKnown RBP6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 RAPGEF1Q13905 1077 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 LMNTD2Q8IXW0 634 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 SAMD3Q8N6K7 520 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 CCDC89Q8N998 374 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 CAPN10Q9HC96 672 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 CHST12Q9NRB3 414 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 SLC45A1Q9Y2W3 748 aa6.52□□□□□ -1.37
SSX2IP-205ENST00000460500 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 PES1O00541 588 aaKnown RBP6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 CASQ1P31415 396 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 CD151P48509 253 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 FAM160A1Q05DH4 1040 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 ZC3H12AQ5D1E8 599 aaKnown RBP6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 MSL1Q68DK7 614 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 ANKRD13DQ6ZTN6 518 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 METTL16Q86W50 562 aaKnown RBP6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 CHCHD4Q8N4Q1 142 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 ACRBPQ8NEB7 543 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 FAM210AQ96ND0 272 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 ZSWIM6Q9HCJ5 1215 aa6.51□□□□□ -1.37
SSX2IP-205ENST00000460500 TYW1Q9NV66 732 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms