RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-208ENST00000460132 PPP2R1AP30153 589 aa19.68■□□□□ 0.74
PLOD3-208ENST00000460132 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
PLOD3-208ENST00000460132 AK7Q96M32 723 aa19.68■□□□□ 0.74
PLOD3-208ENST00000460132 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
PLOD3-208ENST00000460132 SLC4A9Q96Q91 983 aa19.67■□□□□ 0.74
PLOD3-208ENST00000460132 SYT17Q9BSW7 474 aa19.67■□□□□ 0.74
PLOD3-208ENST00000460132 RBM42Q9BTD8 480 aaKnown RBP19.67■□□□□ 0.74
PLOD3-208ENST00000460132 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
PLOD3-208ENST00000460132 POLD1P28340 1107 aa19.66■□□□□ 0.74
PLOD3-208ENST00000460132 SMIM5Q71RC9 77 aa19.66■□□□□ 0.74
PLOD3-208ENST00000460132 FLAD1Q8NFF5 587 aa19.66■□□□□ 0.74
PLOD3-208ENST00000460132 CFAP53Q96M91 514 aa19.66■□□□□ 0.74
PLOD3-208ENST00000460132 LGR6Q9HBX8 967 aa19.66■□□□□ 0.74
PLOD3-208ENST00000460132 C4BP0C0L5 1744 aa19.65■□□□□ 0.74
PLOD3-208ENST00000460132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
PLOD3-208ENST00000460132 RNMTO43148 476 aaKnown RBP19.63■□□□□ 0.73
PLOD3-208ENST00000460132 PHF14O94880 888 aa19.63■□□□□ 0.73
PLOD3-208ENST00000460132 MSL1Q68DK7 614 aa19.63■□□□□ 0.73
PLOD3-208ENST00000460132 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
PLOD3-208ENST00000460132 SLC52A2Q9HAB3 445 aa19.62■□□□□ 0.73
PLOD3-208ENST00000460132 GNPATO15228 680 aa19.61■□□□□ 0.73
PLOD3-208ENST00000460132 SSFA2P28290 1259 aa19.61■□□□□ 0.73
PLOD3-208ENST00000460132 COL24A1Q17RW2 1714 aa19.6■□□□□ 0.73
PLOD3-208ENST00000460132 DCAF8L1A6NGE4 600 aa19.6■□□□□ 0.73
PLOD3-208ENST00000460132 NUDCQ9Y266 331 aa19.6■□□□□ 0.73
PLOD3-208ENST00000460132 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
PLOD3-208ENST00000460132 KLHL34Q8N239 644 aa19.59■□□□□ 0.73
PLOD3-208ENST00000460132 PHACTR3Q96KR7 559 aa19.59■□□□□ 0.73
PLOD3-208ENST00000460132 RSPH6AQ9H0K4 717 aa19.59■□□□□ 0.73
PLOD3-208ENST00000460132 SCN11AQ9UI33 1791 aa19.59■□□□□ 0.73
PLOD3-208ENST00000460132 U2AF1L5P0DN76 240 aaPredicted RBP19.58■□□□□ 0.72
PLOD3-208ENST00000460132 PRKAR2BP31323 418 aa19.58■□□□□ 0.72
PLOD3-208ENST00000460132 U2AF1Q01081 240 aaKnown RBP eCLIP19.58■□□□□ 0.72
PLOD3-208ENST00000460132 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.72
PLOD3-208ENST00000460132 UBR3Q6ZT12 1888 aa19.58■□□□□ 0.72
PLOD3-208ENST00000460132 RC3H1Q5TC82 1133 aaKnown RBP19.57■□□□□ 0.72
PLOD3-208ENST00000460132 ZNF831Q5JPB2 1677 aa19.56■□□□□ 0.72
PLOD3-208ENST00000460132 GNAT3A8MTJ3 354 aa19.56■□□□□ 0.72
PLOD3-208ENST00000460132 SLC39A6Q13433 755 aa19.56■□□□□ 0.72
PLOD3-208ENST00000460132 IL17REQ8NFR9 667 aa19.56■□□□□ 0.72
PLOD3-208ENST00000460132 RTCBQ9Y3I0 505 aaKnown RBP19.56■□□□□ 0.72
PLOD3-208ENST00000460132 CNTNAP4Q9C0A0 1308 aa19.55■□□□□ 0.72
PLOD3-208ENST00000460132 MRC1P22897 1456 aa19.55■□□□□ 0.72
PLOD3-208ENST00000460132 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
PLOD3-208ENST00000460132 TRAPPC3LQ5T215 181 aa19.55■□□□□ 0.72
PLOD3-208ENST00000460132 RPS6KA4O75676 772 aa19.54■□□□□ 0.72
PLOD3-208ENST00000460132 FCHSD2O94868 740 aa19.54■□□□□ 0.72
PLOD3-208ENST00000460132 ADAMTS7Q9UKP4 1686 aa19.53■□□□□ 0.72
PLOD3-208ENST00000460132 CRKLP46109 303 aaKnown RBP19.53■□□□□ 0.72
PLOD3-208ENST00000460132 NLGN2Q8NFZ4 835 aa19.53■□□□□ 0.72
PLOD3-208ENST00000460132 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
PLOD3-208ENST00000460132 DNAJC10Q8IXB1 793 aa19.52■□□□□ 0.72
PLOD3-208ENST00000460132 ADRA2BP18089 450 aa19.51■□□□□ 0.71
PLOD3-208ENST00000460132 TEFQ10587 303 aa19.51■□□□□ 0.71
PLOD3-208ENST00000460132 COL5A3P25940 1745 aaPredicted RBP19.51■□□□□ 0.71
PLOD3-208ENST00000460132 INTS5Q6P9B9 1019 aaKnown RBP19.5■□□□□ 0.71
PLOD3-208ENST00000460132 RFC4P35249 363 aa19.49■□□□□ 0.71
PLOD3-208ENST00000460132 MYH14Q7Z406 1995 aaKnown RBP19.48■□□□□ 0.71
PLOD3-208ENST00000460132 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
PLOD3-208ENST00000460132 YY1P25490 414 aa19.48■□□□□ 0.71
PLOD3-208ENST00000460132 RALBP1Q15311 655 aa19.48■□□□□ 0.71
PLOD3-208ENST00000460132 GPR162Q16538 588 aa19.48■□□□□ 0.71
PLOD3-208ENST00000460132 CD2APQ9Y5K6 639 aa19.48■□□□□ 0.71
PLOD3-208ENST00000460132 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
PLOD3-208ENST00000460132 TJP1Q07157 1748 aa19.48■□□□□ 0.71
PLOD3-208ENST00000460132 CEMIPQ8WUJ3 1361 aa19.47■□□□□ 0.71
PLOD3-208ENST00000460132 CYP19A1P11511 503 aaPredicted RBP19.47■□□□□ 0.71
PLOD3-208ENST00000460132 TTC5Q8N0Z6 440 aa19.47■□□□□ 0.71
PLOD3-208ENST00000460132 VSIG10Q8N0Z9 540 aa19.47■□□□□ 0.71
PLOD3-208ENST00000460132 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
PLOD3-208ENST00000460132 CCDC87Q9NVE4 849 aa19.47■□□□□ 0.71
PLOD3-208ENST00000460132 MMP10P09238 476 aa19.46■□□□□ 0.71
PLOD3-208ENST00000460132 GYS1P13807 737 aa19.46■□□□□ 0.71
PLOD3-208ENST00000460132 ZNF790Q6PG37 636 aa19.46■□□□□ 0.71
PLOD3-208ENST00000460132 CICQ96RK0 1608 aaPredicted RBP19.45■□□□□ 0.7
PLOD3-208ENST00000460132 MCM10Q7L590 875 aa19.45■□□□□ 0.7
PLOD3-208ENST00000460132 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
PLOD3-208ENST00000460132 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
PLOD3-208ENST00000460132 ZNF496Q96IT1 587 aaPredicted RBP19.45■□□□□ 0.7
PLOD3-208ENST00000460132 SRP68Q9UHB9 627 aaKnown RBP19.44■□□□□ 0.7
PLOD3-208ENST00000460132 BTBD11A6QL63 1104 aa19.43■□□□□ 0.7
PLOD3-208ENST00000460132 KCNQ3O43525 872 aa19.43■□□□□ 0.7
PLOD3-208ENST00000460132 DCTN1Q14203 1278 aa19.43■□□□□ 0.7
PLOD3-208ENST00000460132 PLEKHF1Q96S99 279 aa19.43■□□□□ 0.7
PLOD3-208ENST00000460132 UTRNP46939 3433 aa19.43■□□□□ 0.7
PLOD3-208ENST00000460132 HTATSF1O43719 755 aaKnown RBP19.42■□□□□ 0.7
PLOD3-208ENST00000460132 ZBTB1Q9Y2K1 713 aa19.42■□□□□ 0.7
PLOD3-208ENST00000460132 SOS1Q07889 1333 aaPredicted RBP19.42■□□□□ 0.7
PLOD3-208ENST00000460132 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
PLOD3-208ENST00000460132 NEFMP07197 916 aa19.41■□□□□ 0.7
PLOD3-208ENST00000460132 YBX3P16989 372 aaKnown RBP eCLIP19.41■□□□□ 0.7
PLOD3-208ENST00000460132 HEG1Q9ULI3 1381 aa19.41■□□□□ 0.7
PLOD3-208ENST00000460132 SIPA1L3O60292 1781 aaPredicted RBP19.4■□□□□ 0.7
PLOD3-208ENST00000460132 UBR2Q8IWV8 1755 aa19.4■□□□□ 0.7
PLOD3-208ENST00000460132 STARD3NLO95772 234 aa19.4■□□□□ 0.7
PLOD3-208ENST00000460132 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
PLOD3-208ENST00000460132 FKBP8Q14318 412 aa19.4■□□□□ 0.7
PLOD3-208ENST00000460132 FMNL2Q96PY5 1086 aa19.4■□□□□ 0.7
PLOD3-208ENST00000460132 CANXP27824 592 aaKnown RBP19.39■□□□□ 0.69
PLOD3-208ENST00000460132 TEX13AQ9BXU3 409 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms