RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
C4A-244ENST00000460060 C5P01031 1676 aa16.87■□□□□ 0.29
C4A-244ENST00000460060 MPRIPQ6WCQ1 1025 aa16.86■□□□□ 0.29
C4A-244ENST00000460060 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
C4A-244ENST00000460060 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
C4A-244ENST00000460060 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
C4A-244ENST00000460060 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
C4A-244ENST00000460060 CYP27B1O15528 508 aa16.85■□□□□ 0.29
C4A-244ENST00000460060 FCHSD2O94868 740 aa16.85■□□□□ 0.29
C4A-244ENST00000460060 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
C4A-244ENST00000460060 EYA1Q99502 592 aa16.85■□□□□ 0.29
C4A-244ENST00000460060 CCDC146Q8IYE0 955 aa16.84■□□□□ 0.29
C4A-244ENST00000460060 SMARCC1Q92922 1105 aaPredicted RBP16.84■□□□□ 0.29
C4A-244ENST00000460060 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
C4A-244ENST00000460060 ATP10DQ9P241 1426 aa16.84■□□□□ 0.29
C4A-244ENST00000460060 ITGB4P16144 1822 aa16.84■□□□□ 0.29
C4A-244ENST00000460060 HMOX1P09601 288 aa16.83■□□□□ 0.28
C4A-244ENST00000460060 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
C4A-244ENST00000460060 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.28
C4A-244ENST00000460060 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
C4A-244ENST00000460060 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
C4A-244ENST00000460060 AMIGO3Q86WK7 504 aa16.82■□□□□ 0.28
C4A-244ENST00000460060 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
C4A-244ENST00000460060 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
C4A-244ENST00000460060 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
C4A-244ENST00000460060 PIGBQ92521 554 aa16.81■□□□□ 0.28
C4A-244ENST00000460060 AK7Q96M32 723 aa16.81■□□□□ 0.28
C4A-244ENST00000460060 PLEKHF1Q96S99 279 aa16.81■□□□□ 0.28
C4A-244ENST00000460060 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
C4A-244ENST00000460060 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
C4A-244ENST00000460060 NEFMP07197 916 aa16.8■□□□□ 0.28
C4A-244ENST00000460060 PRKAR2BP31323 418 aa16.8■□□□□ 0.28
C4A-244ENST00000460060 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
C4A-244ENST00000460060 AEBP1Q8IUX7 1158 aa16.8■□□□□ 0.28
C4A-244ENST00000460060 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
C4A-244ENST00000460060 ADCY9O60503 1353 aa16.79■□□□□ 0.28
C4A-244ENST00000460060 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
C4A-244ENST00000460060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.78■□□□□ 0.28
C4A-244ENST00000460060 APAF1O14727 1248 aa16.78■□□□□ 0.28
C4A-244ENST00000460060 PHF14O94880 888 aa16.78■□□□□ 0.28
C4A-244ENST00000460060 PKD1L3Q7Z443 1732 aa16.78■□□□□ 0.28
C4A-244ENST00000460060 KDRP35968 1356 aa16.77■□□□□ 0.28
C4A-244ENST00000460060 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
C4A-244ENST00000460060 SSFA2P28290 1259 aa16.77■□□□□ 0.28
C4A-244ENST00000460060 SIK1P57059 783 aa16.77■□□□□ 0.28
C4A-244ENST00000460060 NCAPD2Q15021 1401 aa16.77■□□□□ 0.27
C4A-244ENST00000460060 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
C4A-244ENST00000460060 LINC00116Q8NCU8 138 aa16.76■□□□□ 0.27
C4A-244ENST00000460060 PHACTR3Q96KR7 559 aa16.76■□□□□ 0.27
C4A-244ENST00000460060 SPG7Q9UQ90 795 aa16.76■□□□□ 0.27
C4A-244ENST00000460060 HSPA6P17066 643 aa16.75■□□□□ 0.27
C4A-244ENST00000460060 ZNF526Q8TF50 670 aaPredicted RBP16.75■□□□□ 0.27
C4A-244ENST00000460060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.75■□□□□ 0.27
C4A-244ENST00000460060 WWC3Q9ULE0 1092 aa16.75■□□□□ 0.27
C4A-244ENST00000460060 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
C4A-244ENST00000460060 ZBED9Q6R2W3 1325 aa16.74■□□□□ 0.27
C4A-244ENST00000460060 NCBP3Q53F19 620 aaKnown RBP16.74■□□□□ 0.27
C4A-244ENST00000460060 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
C4A-244ENST00000460060 ITPK1Q13572 414 aa16.73■□□□□ 0.27
C4A-244ENST00000460060 NFE2L2Q16236 605 aa16.73■□□□□ 0.27
C4A-244ENST00000460060 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
C4A-244ENST00000460060 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
C4A-244ENST00000460060 ATP6V1AP38606 617 aa16.72■□□□□ 0.27
C4A-244ENST00000460060 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
C4A-244ENST00000460060 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
C4A-244ENST00000460060 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
C4A-244ENST00000460060 KIF3CO14782 793 aa16.71■□□□□ 0.27
C4A-244ENST00000460060 GNPATO15228 680 aa16.71■□□□□ 0.27
C4A-244ENST00000460060 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
C4A-244ENST00000460060 PHKG2P15735 406 aa16.7■□□□□ 0.26
C4A-244ENST00000460060 RIPK4P57078 832 aa16.7■□□□□ 0.26
C4A-244ENST00000460060 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
C4A-244ENST00000460060 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
C4A-244ENST00000460060 MMP10P09238 476 aa16.69■□□□□ 0.26
C4A-244ENST00000460060 MTHFSDQ2M296 383 aaKnown RBP16.69■□□□□ 0.26
C4A-244ENST00000460060 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
C4A-244ENST00000460060 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
C4A-244ENST00000460060 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
C4A-244ENST00000460060 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
C4A-244ENST00000460060 TGFB2P61812 414 aa16.67■□□□□ 0.26
C4A-244ENST00000460060 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
C4A-244ENST00000460060 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
C4A-244ENST00000460060 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
C4A-244ENST00000460060 PLEKHG2Q9H7P9 1386 aa16.66■□□□□ 0.26
C4A-244ENST00000460060 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
C4A-244ENST00000460060 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
C4A-244ENST00000460060 SLC4A9Q96Q91 983 aa16.66■□□□□ 0.26
C4A-244ENST00000460060 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
C4A-244ENST00000460060 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
C4A-244ENST00000460060 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
C4A-244ENST00000460060 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
C4A-244ENST00000460060 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
C4A-244ENST00000460060 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
C4A-244ENST00000460060 RC3H1Q5TC82 1133 aaKnown RBP16.65■□□□□ 0.26
C4A-244ENST00000460060 KIAA1551Q9HCM1 1747 aa16.65■□□□□ 0.26
C4A-244ENST00000460060 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
C4A-244ENST00000460060 ERVV-2B6SEH9 535 aa16.64■□□□□ 0.25
C4A-244ENST00000460060 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
C4A-244ENST00000460060 WDR63Q8IWG1 891 aa16.64■□□□□ 0.25
C4A-244ENST00000460060 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms