RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 MCM5P33992 734 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
UFD1-205ENST00000459854 NPC1L1Q9UHC9 1359 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 CDC42BPGQ6DT37 1551 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 CHRNA2Q15822 529 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
UFD1-205ENST00000459854 SMC3Q9UQE7 1217 aa11.68□□□□□ -0.54
UFD1-205ENST00000459854 JCADQ9P266 1359 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 MST1RQ04912 1400 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
UFD1-205ENST00000459854 CAGE1Q8TC20 777 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 RABEP1Q15276 862 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
UFD1-205ENST00000459854 CDC45O75419 566 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 CLSTN1O94985 981 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 SPG7Q9UQ90 795 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 POLR3AO14802 1390 aaPredicted RBP11.66□□□□□ -0.54
UFD1-205ENST00000459854 FLT4P35916 1363 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 FRAT2O75474 233 aaPredicted RBP11.66□□□□□ -0.54
UFD1-205ENST00000459854 ANKRD24Q8TF21 1146 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 CLUAP1Q96AJ1 413 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
UFD1-205ENST00000459854 RBM10P98175 930 aaKnown RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
UFD1-205ENST00000459854 FOXD4L5Q5VV16 416 aaPredicted RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 FOXD4L4Q8WXT5 416 aaPredicted RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 TRIM29Q14134 588 aa11.65□□□□□ -0.54
UFD1-205ENST00000459854 NOL8Q76FK4 1167 aaKnown RBP11.65□□□□□ -0.54
UFD1-205ENST00000459854 OLFM4Q6UX06 510 aa11.65□□□□□ -0.55
UFD1-205ENST00000459854 IP6K1Q92551 441 aa11.65□□□□□ -0.55
UFD1-205ENST00000459854 HMOX1P09601 288 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 PDCP20941 246 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 ARHGEF28Q8N1W1 1705 aaKnown RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 NRXN3Q9Y4C0 1643 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 HSPA1LP34931 641 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 PIP4K2AP48426 406 aaPredicted RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 GBP3Q9H0R5 595 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
UFD1-205ENST00000459854 SMARCE1Q969G3 411 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
UFD1-205ENST00000459854 GORABQ5T7V8 394 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 GIMAP7Q8NHV1 300 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 KNDC1Q76NI1 1749 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 TEFQ10587 303 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 TRIM5Q9C035 493 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
UFD1-205ENST00000459854 PES1O00541 588 aaKnown RBP11.63□□□□□ -0.55
UFD1-205ENST00000459854 SYNE3Q6ZMZ3 975 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
UFD1-205ENST00000459854 MAP3K19Q56UN5 1328 aa11.63□□□□□ -0.55
UFD1-205ENST00000459854 CCDC192P0DO97 292 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 AKAP17AQ02040 695 aaKnown RBP11.62□□□□□ -0.55
UFD1-205ENST00000459854 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 DYNC1I1O14576 645 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 FCHSD2O94868 740 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 HSP90AB4PQ58FF6 505 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 CREBRFQ8IUR6 639 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 XRN1Q8IZH2 1706 aaKnown RBP11.62□□□□□ -0.55
UFD1-205ENST00000459854 IQCEQ6IPM2 695 aa11.62□□□□□ -0.55
UFD1-205ENST00000459854 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 AMOTQ4VCS5 1084 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 USP21Q9UK80 565 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 CHD2O14647 1828 aaKnown RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 HOXC9P31274 260 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 MCM4P33991 863 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 PRKAR2BP31323 418 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
UFD1-205ENST00000459854 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
UFD1-205ENST00000459854 EXOC5O00471 708 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 GOLGA6L10A6NI86 522 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 PDE4CQ08493 712 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 PDE3AQ14432 1141 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 PLIN1O60240 522 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 CT47B1P0C2W7 299 aaPredicted RBP11.6□□□□□ -0.55
UFD1-205ENST00000459854 PSMA5P28066 241 aa11.6□□□□□ -0.55
UFD1-205ENST00000459854 DNAJC2Q99543 621 aaKnown RBP11.59□□□□□ -0.55
UFD1-205ENST00000459854 ZMYND15Q9H091 742 aa11.59□□□□□ -0.55
UFD1-205ENST00000459854 ERLIN2O94905 339 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms