RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 SMTNP53814 917 aa11.28□□□□□ -0.6
CCDC66-209ENST00000459746 PTSQ03393 145 aa11.28□□□□□ -0.6
CCDC66-209ENST00000459746 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
CCDC66-209ENST00000459746 CLDN10P78369 228 aa11.27□□□□□ -0.61
CCDC66-209ENST00000459746 TLR1Q15399 786 aa11.27□□□□□ -0.61
CCDC66-209ENST00000459746 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
CCDC66-209ENST00000459746 TMEM214Q6NUQ4 689 aaKnown RBP11.27□□□□□ -0.61
CCDC66-209ENST00000459746 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
CCDC66-209ENST00000459746 SIX5Q8N196 739 aa11.27□□□□□ -0.61
CCDC66-209ENST00000459746 FHDC1Q9C0D6 1143 aaPredicted RBP11.27□□□□□ -0.61
CCDC66-209ENST00000459746 M0R2N6 131 aa11.26□□□□□ -0.61
CCDC66-209ENST00000459746 TAS1R3Q7RTX0 852 aa11.26□□□□□ -0.61
CCDC66-209ENST00000459746 TPCN2Q8NHX9 752 aa11.26□□□□□ -0.61
CCDC66-209ENST00000459746 SLC35F4A4IF30 521 aa11.25□□□□□ -0.61
CCDC66-209ENST00000459746 FAM196BA6NMK8 535 aa11.25□□□□□ -0.61
CCDC66-209ENST00000459746 CDK2AP1O14519 115 aa11.25□□□□□ -0.61
CCDC66-209ENST00000459746 POU4F2Q12837 409 aa11.25□□□□□ -0.61
CCDC66-209ENST00000459746 NBPF10Q6P3W6 841 aaKnown RBP11.25□□□□□ -0.61
CCDC66-209ENST00000459746 NBPF15Q8N660 670 aa11.25□□□□□ -0.61
CCDC66-209ENST00000459746 A6NJY4 79 aa11.24□□□□□ -0.61
CCDC66-209ENST00000459746 ARID3CA6NKF2 412 aa11.24□□□□□ -0.61
CCDC66-209ENST00000459746 STAU1O95793 577 aaKnown RBP11.24□□□□□ -0.61
CCDC66-209ENST00000459746 MTFR1Q15390 333 aa11.24□□□□□ -0.61
CCDC66-209ENST00000459746 RHBDD1Q8TEB9 315 aa11.24□□□□□ -0.61
CCDC66-209ENST00000459746 ZNF358Q9NW07 568 aa11.24□□□□□ -0.61
CCDC66-209ENST00000459746 SERTAD1Q9UHV2 236 aa11.24□□□□□ -0.61
CCDC66-209ENST00000459746 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
CCDC66-209ENST00000459746 CCDC155Q8N6L0 562 aa11.23□□□□□ -0.61
CCDC66-209ENST00000459746 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC66-209ENST00000459746 DYRK1BQ9Y463 629 aa11.23□□□□□ -0.61
CCDC66-209ENST00000459746 H3BM21 787 aa11.22□□□□□ -0.61
CCDC66-209ENST00000459746 RFX1P22670 979 aa11.22□□□□□ -0.61
CCDC66-209ENST00000459746 SEC13P55735 322 aa11.22□□□□□ -0.61
CCDC66-209ENST00000459746 PTK7Q13308 1070 aa11.22□□□□□ -0.61
CCDC66-209ENST00000459746 TREML4Q6UXN2 200 aa11.22□□□□□ -0.61
CCDC66-209ENST00000459746 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
CCDC66-209ENST00000459746 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
CCDC66-209ENST00000459746 GMCL1Q96IK5 515 aa11.21□□□□□ -0.61
CCDC66-209ENST00000459746 ZNF594Q96JF6 807 aaPredicted RBP11.21□□□□□ -0.61
CCDC66-209ENST00000459746 TIMMDC1Q9NPL8 285 aa11.21□□□□□ -0.61
CCDC66-209ENST00000459746 KIAA1024Q9UPX6 916 aa11.21□□□□□ -0.61
CCDC66-209ENST00000459746 SENP3-EIF4A1A0A087X0R7 540 aa11.2□□□□□ -0.62
CCDC66-209ENST00000459746 WFS1O76024 890 aa11.2□□□□□ -0.62
CCDC66-209ENST00000459746 RHOQP17081 205 aa11.2□□□□□ -0.62
CCDC66-209ENST00000459746 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
CCDC66-209ENST00000459746 IRF7Q92985 503 aa11.2□□□□□ -0.62
CCDC66-209ENST00000459746 SCHIP1Q9P0W5 487 aaPredicted RBP11.2□□□□□ -0.62
CCDC66-209ENST00000459746 DKK1O94907 266 aa11.19□□□□□ -0.62
CCDC66-209ENST00000459746 CRTC2Q53ET0 693 aaPredicted RBP11.19□□□□□ -0.62
CCDC66-209ENST00000459746 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
CCDC66-209ENST00000459746 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L15C9J2P7 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L13C9JLJ4 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L11C9JVI0 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L21D6R901 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L18D6R9N7 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L22D6RA61 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L17D6RBQ6 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L19D6RCP7 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L20D6RJB6 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 ITGA6P23229 1130 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
CCDC66-209ENST00000459746 USP17L24Q0WX57 530 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 C4orf17Q53FE4 359 aa11.18□□□□□ -0.62
CCDC66-209ENST00000459746 NANOS1Q8WY41 292 aaKnown RBP11.18□□□□□ -0.62
CCDC66-209ENST00000459746 H7C1W4 665 aa11.17□□□□□ -0.62
CCDC66-209ENST00000459746 F11P03951 625 aa11.17□□□□□ -0.62
CCDC66-209ENST00000459746 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
CCDC66-209ENST00000459746 PBXIP1Q96AQ6 731 aa11.17□□□□□ -0.62
CCDC66-209ENST00000459746 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
CCDC66-209ENST00000459746 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
CCDC66-209ENST00000459746 VSIG8P0DPA2 414 aa11.16□□□□□ -0.62
CCDC66-209ENST00000459746 EPHA4P54764 986 aa11.16□□□□□ -0.62
CCDC66-209ENST00000459746 FOXK2Q01167 660 aa11.16□□□□□ -0.62
CCDC66-209ENST00000459746 DPYDQ12882 1025 aa11.16□□□□□ -0.62
CCDC66-209ENST00000459746 ELOAQ14241 798 aaKnown RBP11.16□□□□□ -0.62
CCDC66-209ENST00000459746 GAS2L2Q8NHY3 880 aa11.16□□□□□ -0.62
CCDC66-209ENST00000459746 C1orf216Q8TAB5 229 aa11.16□□□□□ -0.62
CCDC66-209ENST00000459746 FAM200AQ8TCP9 573 aa11.16□□□□□ -0.62
CCDC66-209ENST00000459746 SFI1A8K8P3 1242 aa11.15□□□□□ -0.62
CCDC66-209ENST00000459746 TNS4Q8IZW8 715 aa11.15□□□□□ -0.62
CCDC66-209ENST00000459746 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
CCDC66-209ENST00000459746 ATG7O95352 703 aa11.14□□□□□ -0.63
CCDC66-209ENST00000459746 PHKA2P46019 1235 aa11.14□□□□□ -0.63
CCDC66-209ENST00000459746 TEAD4Q15561 434 aa11.14□□□□□ -0.63
CCDC66-209ENST00000459746 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
CCDC66-209ENST00000459746 CHMP3Q9Y3E7 222 aa11.14□□□□□ -0.63
CCDC66-209ENST00000459746 VEGFBP49765 207 aa11.13□□□□□ -0.63
CCDC66-209ENST00000459746 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
CCDC66-209ENST00000459746 SV2AQ7L0J3 742 aa11.13□□□□□ -0.63
CCDC66-209ENST00000459746 TRIM22Q8IYM9 498 aa11.13□□□□□ -0.63
CCDC66-209ENST00000459746 GAS2L1Q99501 681 aaPredicted RBP11.13□□□□□ -0.63
CCDC66-209ENST00000459746 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
CCDC66-209ENST00000459746 LBRQ14739 615 aaKnown RBP11.12□□□□□ -0.63
CCDC66-209ENST00000459746 NBPF1Q3BBV0 1214 aa11.12□□□□□ -0.63
CCDC66-209ENST00000459746 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
CCDC66-209ENST00000459746 RIPOR1Q6ZS17 1223 aa11.12□□□□□ -0.63
CCDC66-209ENST00000459746 SLC9A9Q8IVB4 645 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms