RNA–Protein interactions for RNA: ENST00000458550.5

PRRC2B-207, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 1 (best) BASIC

Gene PRRC2B, Length 899 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-207ENST00000458550 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
PRRC2B-207ENST00000458550 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
PRRC2B-207ENST00000458550 GNPATO15228 680 aa18.47■□□□□ 0.55
PRRC2B-207ENST00000458550 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
PRRC2B-207ENST00000458550 SMIM5Q71RC9 77 aa18.47■□□□□ 0.55
PRRC2B-207ENST00000458550 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
PRRC2B-207ENST00000458550 CABP4P57796 275 aa18.46■□□□□ 0.55
PRRC2B-207ENST00000458550 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
PRRC2B-207ENST00000458550 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
PRRC2B-207ENST00000458550 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.549e-8■□□□□ 10.9
PRRC2B-207ENST00000458550 ITPK1Q13572 414 aa18.45■□□□□ 0.54
PRRC2B-207ENST00000458550 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
PRRC2B-207ENST00000458550 MTHFSP49914 203 aa18.44■□□□□ 0.54
PRRC2B-207ENST00000458550 TRAPPC3LQ5T215 181 aa18.43■□□□□ 0.54
PRRC2B-207ENST00000458550 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
PRRC2B-207ENST00000458550 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
PRRC2B-207ENST00000458550 RTCBQ9Y3I0 505 aaKnown RBP18.42■□□□□ 0.54
PRRC2B-207ENST00000458550 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.53
PRRC2B-207ENST00000458550 C1QTNF8P60827 252 aa18.39■□□□□ 0.53
PRRC2B-207ENST00000458550 RC3H1Q5TC82 1133 aaKnown RBP18.39■□□□□ 0.53
PRRC2B-207ENST00000458550 IL13P35225 146 aa18.38■□□□□ 0.53
PRRC2B-207ENST00000458550 NLGN1Q8N2Q7 840 aa18.38■□□□□ 0.53
PRRC2B-207ENST00000458550 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
PRRC2B-207ENST00000458550 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 MMP10P09238 476 aa18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 ADRA2BP18089 450 aa18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 RFC4P35249 363 aa18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 AMER1Q5JTC6 1135 aaPredicted RBP18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 SLC4A9Q96Q91 983 aa18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 WWC3Q9ULE0 1092 aa18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 KIF7Q2M1P5 1343 aa18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 ZNF831Q5JPB2 1677 aa18.37■□□□□ 0.53
PRRC2B-207ENST00000458550 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
PRRC2B-207ENST00000458550 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
PRRC2B-207ENST00000458550 KDRP35968 1356 aa18.36■□□□□ 0.53
PRRC2B-207ENST00000458550 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
PRRC2B-207ENST00000458550 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
PRRC2B-207ENST00000458550 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
PRRC2B-207ENST00000458550 RPS6KA4O75676 772 aa18.35■□□□□ 0.53
PRRC2B-207ENST00000458550 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
PRRC2B-207ENST00000458550 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
PRRC2B-207ENST00000458550 CC2D1BQ5T0F9 858 aaKnown RBP18.34■□□□□ 0.53
PRRC2B-207ENST00000458550 COL5A3P25940 1745 aaPredicted RBP18.34■□□□□ 0.53
PRRC2B-207ENST00000458550 HMOX1P09601 288 aa18.33■□□□□ 0.52
PRRC2B-207ENST00000458550 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.52
PRRC2B-207ENST00000458550 PARP3Q9Y6F1 533 aa18.32■□□□□ 0.52
PRRC2B-207ENST00000458550 DIAPH1O60610 1272 aaKnown RBP18.31■□□□□ 0.52
PRRC2B-207ENST00000458550 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
PRRC2B-207ENST00000458550 CNGB1Q14028 1251 aaPredicted RBP18.31■□□□□ 0.52
PRRC2B-207ENST00000458550 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
PRRC2B-207ENST00000458550 GYS1P13807 737 aa18.3■□□□□ 0.52
PRRC2B-207ENST00000458550 TGFB2P61812 414 aa18.3■□□□□ 0.52
PRRC2B-207ENST00000458550 GPBP1L1Q9HC44 474 aaPredicted RBP18.3■□□□□ 0.52
PRRC2B-207ENST00000458550 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
PRRC2B-207ENST00000458550 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
PRRC2B-207ENST00000458550 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
PRRC2B-207ENST00000458550 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
PRRC2B-207ENST00000458550 SLC52A2Q9HAB3 445 aa18.29■□□□□ 0.52
PRRC2B-207ENST00000458550 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
PRRC2B-207ENST00000458550 CICQ96RK0 1608 aaPredicted RBP18.28■□□□□ 0.52
PRRC2B-207ENST00000458550 A0A0G2JLW4 131 aa18.28■□□□□ 0.52
PRRC2B-207ENST00000458550 ZNF526Q8TF50 670 aaPredicted RBP18.28■□□□□ 0.52
PRRC2B-207ENST00000458550 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.52
PRRC2B-207ENST00000458550 BCS1LQ9Y276 419 aa18.27■□□□□ 0.52
PRRC2B-207ENST00000458550 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
PRRC2B-207ENST00000458550 MTHFSDQ2M296 383 aaKnown RBP18.26■□□□□ 0.51
PRRC2B-207ENST00000458550 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
PRRC2B-207ENST00000458550 ZPR1O75312 459 aa18.25■□□□□ 0.51
PRRC2B-207ENST00000458550 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
PRRC2B-207ENST00000458550 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
PRRC2B-207ENST00000458550 TJP1Q07157 1748 aa18.24■□□□□ 0.51
PRRC2B-207ENST00000458550 DPEP1P16444 411 aa18.24■□□□□ 0.51
PRRC2B-207ENST00000458550 SLC39A6Q13433 755 aa18.24■□□□□ 0.51
PRRC2B-207ENST00000458550 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
PRRC2B-207ENST00000458550 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
PRRC2B-207ENST00000458550 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
PRRC2B-207ENST00000458550 FCHSD2O94868 740 aa18.23■□□□□ 0.51
PRRC2B-207ENST00000458550 FKBP8Q14318 412 aa18.23■□□□□ 0.51
PRRC2B-207ENST00000458550 C10orf71Q711Q0 1435 aa18.23■□□□□ 0.51
PRRC2B-207ENST00000458550 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
PRRC2B-207ENST00000458550 ADCY9O60503 1353 aa18.21■□□□□ 0.51
PRRC2B-207ENST00000458550 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
PRRC2B-207ENST00000458550 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.51
PRRC2B-207ENST00000458550 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
PRRC2B-207ENST00000458550 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
PRRC2B-207ENST00000458550 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
PRRC2B-207ENST00000458550 TEFQ10587 303 aa18.19■□□□□ 0.5
PRRC2B-207ENST00000458550 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
PRRC2B-207ENST00000458550 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
PRRC2B-207ENST00000458550 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
PRRC2B-207ENST00000458550 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
PRRC2B-207ENST00000458550 BRCA1P38398 1863 aaKnown RBP18.18■□□□□ 0.5
PRRC2B-207ENST00000458550 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
PRRC2B-207ENST00000458550 DDR1Q08345 913 aa18.18■□□□□ 0.5
PRRC2B-207ENST00000458550 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
PRRC2B-207ENST00000458550 MRC1P22897 1456 aa18.18■□□□□ 0.5
PRRC2B-207ENST00000458550 SOS1Q07889 1333 aaPredicted RBP18.18■□□□□ 0.5
PRRC2B-207ENST00000458550 ARFGEF1Q9Y6D6 1849 aa18.17■□□□□ 0.5
PRRC2B-207ENST00000458550 STARD3NLO95772 234 aa18.17■□□□□ 0.5
PRRC2B-207ENST00000458550 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms