RNA–Protein interactions for RNA: ENST00000458438.2

LYRM4-203, Transcript of LYR motif containing 4, humanhuman

TSL 2

Gene LYRM4, Length 941 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-203ENST00000458438 COL23A1Q86Y22 540 aaPredicted RBP17.21■□□□□ 0.35
LYRM4-203ENST00000458438 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
LYRM4-203ENST00000458438 ITPK1Q13572 414 aa17.2■□□□□ 0.34
LYRM4-203ENST00000458438 MTHFSDQ2M296 383 aaKnown RBP17.2■□□□□ 0.34
LYRM4-203ENST00000458438 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
LYRM4-203ENST00000458438 COL5A3P25940 1745 aaPredicted RBP17.19■□□□□ 0.34
LYRM4-203ENST00000458438 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
LYRM4-203ENST00000458438 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
LYRM4-203ENST00000458438 LINC00116Q8NCU8 138 aa17.19■□□□□ 0.34
LYRM4-203ENST00000458438 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
LYRM4-203ENST00000458438 MSH5O43196 834 aa17.18■□□□□ 0.34
LYRM4-203ENST00000458438 SLC4A9Q96Q91 983 aa17.18■□□□□ 0.34
LYRM4-203ENST00000458438 AMIGO3Q86WK7 504 aa17.17■□□□□ 0.34
LYRM4-203ENST00000458438 AK7Q96M32 723 aa17.17■□□□□ 0.34
LYRM4-203ENST00000458438 ARXQ96QS3 562 aa17.17■□□□□ 0.34
LYRM4-203ENST00000458438 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
LYRM4-203ENST00000458438 RNMTO43148 476 aaKnown RBP17.16■□□□□ 0.34
LYRM4-203ENST00000458438 SMIM5Q71RC9 77 aa17.16■□□□□ 0.34
LYRM4-203ENST00000458438 FLAD1Q8NFF5 587 aa17.16■□□□□ 0.34
LYRM4-203ENST00000458438 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
LYRM4-203ENST00000458438 TJP1Q07157 1748 aa17.16■□□□□ 0.34
LYRM4-203ENST00000458438 SLC52A2Q9HAB3 445 aa17.15■□□□□ 0.34
LYRM4-203ENST00000458438 NUDCQ9Y266 331 aa17.15■□□□□ 0.34
LYRM4-203ENST00000458438 MRC1P22897 1456 aa17.15■□□□□ 0.34
LYRM4-203ENST00000458438 POLD1P28340 1107 aa17.14■□□□□ 0.33
LYRM4-203ENST00000458438 SYT17Q9BSW7 474 aa17.14■□□□□ 0.33
LYRM4-203ENST00000458438 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
LYRM4-203ENST00000458438 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
LYRM4-203ENST00000458438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
LYRM4-203ENST00000458438 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
LYRM4-203ENST00000458438 PHF14O94880 888 aa17.13■□□□□ 0.33
LYRM4-203ENST00000458438 DDX10Q13206 875 aaKnown RBP17.13■□□□□ 0.33
LYRM4-203ENST00000458438 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
LYRM4-203ENST00000458438 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
LYRM4-203ENST00000458438 CHD4Q14839 1912 aa17.12■□□□□ 0.33
LYRM4-203ENST00000458438 GNPATO15228 680 aa17.12■□□□□ 0.33
LYRM4-203ENST00000458438 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
LYRM4-203ENST00000458438 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
LYRM4-203ENST00000458438 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
LYRM4-203ENST00000458438 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
LYRM4-203ENST00000458438 MYH14Q7Z406 1995 aaKnown RBP17.11■□□□□ 0.33
LYRM4-203ENST00000458438 SSFA2P28290 1259 aa17.11■□□□□ 0.33
LYRM4-203ENST00000458438 GAS2L2Q8NHY3 880 aa17.11■□□□□ 0.33
LYRM4-203ENST00000458438 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
LYRM4-203ENST00000458438 UBR2Q8IWV8 1755 aa17.1■□□□□ 0.33
LYRM4-203ENST00000458438 GNAT3A8MTJ3 354 aa17.1■□□□□ 0.33
LYRM4-203ENST00000458438 SLC39A6Q13433 755 aa17.09■□□□□ 0.33
LYRM4-203ENST00000458438 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
LYRM4-203ENST00000458438 KLHL34Q8N239 644 aa17.09■□□□□ 0.33
LYRM4-203ENST00000458438 IL17REQ8NFR9 667 aa17.09■□□□□ 0.33
LYRM4-203ENST00000458438 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
LYRM4-203ENST00000458438 C4AP0C0L4 1744 aa17.09■□□□□ 0.33
LYRM4-203ENST00000458438 CNTNAP4Q9C0A0 1308 aa17.08■□□□□ 0.32
LYRM4-203ENST00000458438 FCHSD2O94868 740 aa17.08■□□□□ 0.32
LYRM4-203ENST00000458438 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.32
LYRM4-203ENST00000458438 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
LYRM4-203ENST00000458438 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
LYRM4-203ENST00000458438 RPS6KA4O75676 772 aa17.06■□□□□ 0.32
LYRM4-203ENST00000458438 RALBP1Q15311 655 aa17.06■□□□□ 0.32
LYRM4-203ENST00000458438 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
LYRM4-203ENST00000458438 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
LYRM4-203ENST00000458438 TEFQ10587 303 aa17.05■□□□□ 0.32
LYRM4-203ENST00000458438 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
LYRM4-203ENST00000458438 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
LYRM4-203ENST00000458438 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
LYRM4-203ENST00000458438 ARHGEF1Q92888 912 aaKnown RBP17.04■□□□□ 0.32
LYRM4-203ENST00000458438 ADRA2BP18089 450 aa17.03■□□□□ 0.32
LYRM4-203ENST00000458438 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
LYRM4-203ENST00000458438 NLGN2Q8NFZ4 835 aa17.03■□□□□ 0.32
LYRM4-203ENST00000458438 TTC5Q8N0Z6 440 aa17.02■□□□□ 0.32
LYRM4-203ENST00000458438 CYP19A1P11511 503 aaPredicted RBP17.01■□□□□ 0.31
LYRM4-203ENST00000458438 RFC4P35249 363 aa17.01■□□□□ 0.31
LYRM4-203ENST00000458438 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
LYRM4-203ENST00000458438 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
LYRM4-203ENST00000458438 YY1P25490 414 aa17■□□□□ 0.31
LYRM4-203ENST00000458438 MCM10Q7L590 875 aa17■□□□□ 0.31
LYRM4-203ENST00000458438 PLEKHF1Q96S99 279 aa17■□□□□ 0.31
LYRM4-203ENST00000458438 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
LYRM4-203ENST00000458438 MYBBP1AQ9BQG0 1328 aaKnown RBP16.99■□□□□ 0.31
LYRM4-203ENST00000458438 GYS1P13807 737 aa16.99■□□□□ 0.31
LYRM4-203ENST00000458438 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
LYRM4-203ENST00000458438 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
LYRM4-203ENST00000458438 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
LYRM4-203ENST00000458438 CD2APQ9Y5K6 639 aa16.99■□□□□ 0.31
LYRM4-203ENST00000458438 BTBD11A6QL63 1104 aa16.98■□□□□ 0.31
LYRM4-203ENST00000458438 KCNQ3O43525 872 aa16.98■□□□□ 0.31
LYRM4-203ENST00000458438 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
LYRM4-203ENST00000458438 MMP10P09238 476 aa16.98■□□□□ 0.31
LYRM4-203ENST00000458438 NLGN1Q8N2Q7 840 aa16.98■□□□□ 0.31
LYRM4-203ENST00000458438 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
LYRM4-203ENST00000458438 NEFMP07197 916 aa16.97■□□□□ 0.31
LYRM4-203ENST00000458438 GPR162Q16538 588 aa16.97■□□□□ 0.31
LYRM4-203ENST00000458438 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
LYRM4-203ENST00000458438 KIF13BQ9NQT8 1826 aa16.97■□□□□ 0.31
LYRM4-203ENST00000458438 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
LYRM4-203ENST00000458438 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
LYRM4-203ENST00000458438 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.31
LYRM4-203ENST00000458438 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
LYRM4-203ENST00000458438 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.31
LYRM4-203ENST00000458438 KIAA1551Q9HCM1 1747 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms